RNA–Protein interactions for RNA: ENST00000460686.1

FAM228B-201, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 357 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-201ENST00000460686 TTBK1Q5TCY1 1321 aaPredicted RBP7.4□□□□□ -1.22
FAM228B-201ENST00000460686 ASXL2Q76L83 1435 aa7.39□□□□□ -1.23
FAM228B-201ENST00000460686 F8W031 263 aaPredicted RBP7.39□□□□□ -1.23
FAM228B-201ENST00000460686 SRGAP3O43295 1099 aa7.39□□□□□ -1.23
FAM228B-201ENST00000460686 BUB1BO60566 1050 aaPredicted RBP7.39□□□□□ -1.23
FAM228B-201ENST00000460686 KCNH1O95259 989 aa7.39□□□□□ -1.23
FAM228B-201ENST00000460686 CABP7Q86V35 215 aa7.39□□□□□ -1.23
FAM228B-201ENST00000460686 CPNE8Q86YQ8 564 aa7.39□□□□□ -1.23
FAM228B-201ENST00000460686 RWDD3Q9Y3V2 267 aa7.39□□□□□ -1.23
FAM228B-201ENST00000460686 PCDHA5Q9Y5H7 936 aa7.39□□□□□ -1.23
FAM228B-201ENST00000460686 HCFC2Q9Y5Z7 792 aa7.39□□□□□ -1.23
FAM228B-201ENST00000460686 KDM5BQ9UGL1 1544 aa7.38□□□□□ -1.23
FAM228B-201ENST00000460686 PRXQ9BXM0 1461 aa7.38□□□□□ -1.23
FAM228B-201ENST00000460686 NPHP3-ACAD11A0A0J9YXS1 232 aa7.38□□□□□ -1.23
FAM228B-201ENST00000460686 ZC3H12DA2A288 527 aaKnown RBP7.38□□□□□ -1.23
FAM228B-201ENST00000460686 NOP56O00567 594 aaKnown RBP7.38□□□□□ -1.23
FAM228B-201ENST00000460686 PFKLP17858 780 aa7.38□□□□□ -1.23
FAM228B-201ENST00000460686 PAMP19021 973 aa7.38□□□□□ -1.23
FAM228B-201ENST00000460686 NCAPHQ15003 741 aa7.38□□□□□ -1.23
FAM228B-201ENST00000460686 LARP1BQ659C4 914 aaKnown RBP7.38□□□□□ -1.23
FAM228B-201ENST00000460686 LILRA6Q6PI73 481 aa7.38□□□□□ -1.23
FAM228B-201ENST00000460686 POMZP3Q6PJE2 187 aa7.38□□□□□ -1.23
FAM228B-201ENST00000460686 TMEFF1Q8IYR6 380 aa7.38□□□□□ -1.23
FAM228B-201ENST00000460686 CRACR2BQ8N4Y2 399 aaPredicted RBP7.38□□□□□ -1.23
FAM228B-201ENST00000460686 LZTR1Q8N653 840 aa7.38□□□□□ -1.23
FAM228B-201ENST00000460686 DACT3Q96B18 629 aaPredicted RBP7.38□□□□□ -1.23
FAM228B-201ENST00000460686 KIAA0556O60303 1618 aa7.38□□□□□ -1.23
FAM228B-201ENST00000460686 GLI2P10070 1586 aa7.37□□□□□ -1.23
FAM228B-201ENST00000460686 TRBV23OR9-2A0A075B6M9 112 aa7.37□□□□□ -1.23
FAM228B-201ENST00000460686 SMAD7O15105 426 aaKnown RBP7.37□□□□□ -1.23
FAM228B-201ENST00000460686 PRR5P85299 388 aa7.37□□□□□ -1.23
FAM228B-201ENST00000460686 GNL2Q13823 731 aaKnown RBP7.37□□□□□ -1.23
FAM228B-201ENST00000460686 VMACQ2NL98 169 aa7.37□□□□□ -1.23
FAM228B-201ENST00000460686 FAM129CQ86XR2 697 aa7.37□□□□□ -1.23
FAM228B-201ENST00000460686 BVESQ8NE79 360 aa7.37□□□□□ -1.23
FAM228B-201ENST00000460686 NLGN2Q8NFZ4 835 aa7.37□□□□□ -1.23
FAM228B-201ENST00000460686 USP33Q8TEY7 942 aa7.37□□□□□ -1.23
FAM228B-201ENST00000460686 PWWP2AQ96N64 755 aa7.37□□□□□ -1.23
FAM228B-201ENST00000460686 RXFP1Q9HBX9 757 aa7.37□□□□□ -1.23
FAM228B-201ENST00000460686 EPB41L4AQ9HCS5 686 aaPredicted RBP7.37□□□□□ -1.23
FAM228B-201ENST00000460686 PARD6AQ9NPB6 346 aa7.37□□□□□ -1.23
FAM228B-201ENST00000460686 ACTR10Q9NZ32 417 aa7.37□□□□□ -1.23
FAM228B-201ENST00000460686 GULP1Q9UBP9 304 aa7.37□□□□□ -1.23
FAM228B-201ENST00000460686 KDM6BO15054 1643 aa7.37□□□□□ -1.23
FAM228B-201ENST00000460686 TCF3P15923 654 aa7.36□□□□□ -1.23
FAM228B-201ENST00000460686 LIMS1P48059 325 aa7.36□□□□□ -1.23
FAM228B-201ENST00000460686 TARBP2Q15633 366 aaKnown RBP7.36□□□□□ -1.23
FAM228B-201ENST00000460686 CLEC1BQ9P126 229 aa7.36□□□□□ -1.23
FAM228B-201ENST00000460686 EMC9Q9Y3B6 208 aa7.36□□□□□ -1.23
FAM228B-201ENST00000460686 NPHS1O60500 1241 aa7.35□□□□□ -1.23
FAM228B-201ENST00000460686 TRIM13O60858 407 aa7.35□□□□□ -1.23
FAM228B-201ENST00000460686 GLI4P10075 376 aa7.35□□□□□ -1.23
FAM228B-201ENST00000460686 HOXA5P20719 270 aa7.35□□□□□ -1.23
FAM228B-201ENST00000460686 ZNF143P52747 638 aaPredicted RBP7.35□□□□□ -1.23
FAM228B-201ENST00000460686 CTSWP56202 376 aa7.35□□□□□ -1.23
FAM228B-201ENST00000460686 SCRN1Q12765 414 aa7.35□□□□□ -1.23
FAM228B-201ENST00000460686 TNNI3KQ59H18 835 aa7.35□□□□□ -1.23
FAM228B-201ENST00000460686 C6orf15Q6UXA7 325 aaPredicted RBP7.35□□□□□ -1.23
FAM228B-201ENST00000460686 ZNF513Q8N8E2 541 aaPredicted RBP7.35□□□□□ -1.23
FAM228B-201ENST00000460686 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.35□□□□□ -1.23
FAM228B-201ENST00000460686 RAPGEFL1Q9UHV5 662 aa7.35□□□□□ -1.23
FAM228B-201ENST00000460686 FAN1Q9Y2M0 1017 aa7.35□□□□□ -1.23
FAM228B-201ENST00000460686 EPRSP07814 1512 aaKnown RBP7.35□□□□□ -1.23
FAM228B-201ENST00000460686 CTTNBP2Q8WZ74 1663 aa7.35□□□□□ -1.23
FAM228B-201ENST00000460686 SASH1O94885 1247 aa7.34□□□□□ -1.23
FAM228B-201ENST00000460686 PLS3P13797 630 aa7.34□□□□□ -1.23
FAM228B-201ENST00000460686 MARCH10Q8NA82 808 aaPredicted RBP7.34□□□□□ -1.23
FAM228B-201ENST00000460686 ALG3Q92685 438 aa7.34□□□□□ -1.23
FAM228B-201ENST00000460686 LGR4Q9BXB1 951 aa7.34□□□□□ -1.23
FAM228B-201ENST00000460686 GPRC5CQ9NQ84 441 aa7.34□□□□□ -1.23
FAM228B-201ENST00000460686 NUDT5Q9UKK9 219 aa7.34□□□□□ -1.23
FAM228B-201ENST00000460686 PLA2G2DQ9UNK4 145 aa7.34□□□□□ -1.23
FAM228B-201ENST00000460686 IRS2Q9Y4H2 1338 aa7.33□□□□□ -1.24
FAM228B-201ENST00000460686 TEX14Q8IWB6 1497 aa7.33□□□□□ -1.24
FAM228B-201ENST00000460686 WDR7Q9Y4E6 1490 aa7.33□□□□□ -1.24
FAM228B-201ENST00000460686 B2RBV5 119 aa7.33□□□□□ -1.24
FAM228B-201ENST00000460686 SV2CQ496J9 727 aa7.33□□□□□ -1.24
FAM228B-201ENST00000460686 GTF2IRD2BQ6EKJ0 949 aa7.33□□□□□ -1.24
FAM228B-201ENST00000460686 GTF2IRD2Q86UP8 949 aa7.33□□□□□ -1.24
FAM228B-201ENST00000460686 TRIM59Q8IWR1 403 aa7.33□□□□□ -1.24
FAM228B-201ENST00000460686 FAM178BQ8IXR5 827 aa7.33□□□□□ -1.24
FAM228B-201ENST00000460686 NLGN1Q8N2Q7 840 aa7.33□□□□□ -1.24
FAM228B-201ENST00000460686 ZNF428Q96B54 188 aa7.33□□□□□ -1.24
FAM228B-201ENST00000460686 KCNC2Q96PR1 638 aa7.33□□□□□ -1.24
FAM228B-201ENST00000460686 BCAS3Q9H6U6 928 aa7.33□□□□□ -1.24
FAM228B-201ENST00000460686 LRP2BPQ9P2M1 347 aa7.33□□□□□ -1.24
FAM228B-201ENST00000460686 FBLN5Q9UBX5 448 aa7.33□□□□□ -1.24
FAM228B-201ENST00000460686 ZCCHC11Q5TAX3 1644 aaKnown RBP7.33□□□□□ -1.24
FAM228B-201ENST00000460686 CEP162Q5TB80 1403 aa7.33□□□□□ -1.24
FAM228B-201ENST00000460686 TSPOAP1O95153 1857 aa7.32□□□□□ -1.24
FAM228B-201ENST00000460686 C7orf72A4D263 438 aa7.32□□□□□ -1.24
FAM228B-201ENST00000460686 PPP1R11O60927 126 aaPredicted RBP7.32□□□□□ -1.24
FAM228B-201ENST00000460686 DDAH1O94760 285 aa7.32□□□□□ -1.24
FAM228B-201ENST00000460686 FUCA1P04066 466 aa7.32□□□□□ -1.24
FAM228B-201ENST00000460686 IGFBP6P24592 240 aaPredicted RBP7.32□□□□□ -1.24
FAM228B-201ENST00000460686 NETO2Q8NC67 525 aa7.32□□□□□ -1.24
FAM228B-201ENST00000460686 PEX11GQ96HA9 241 aa7.32□□□□□ -1.24
FAM228B-201ENST00000460686 BTG4Q9NY30 223 aa7.32□□□□□ -1.24
FAM228B-201ENST00000460686 PRKAG3Q9UGI9 489 aa7.32□□□□□ -1.24
FAM228B-201ENST00000460686 ABCA8O94911 1581 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms