RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 ODF2LQ9ULJ1 636 aa17.18■□□□□ 0.34
SSR4-206ENST00000460616 PCDHA13Q9Y5I0 950 aa17.18■□□□□ 0.34
SSR4-206ENST00000460616 FAM107AO95990 144 aa17.18■□□□□ 0.34
SSR4-206ENST00000460616 HDLBPQ00341 1268 aaKnown RBP17.18■□□□□ 0.34
SSR4-206ENST00000460616 PPP2R5BQ15173 497 aa17.18■□□□□ 0.34
SSR4-206ENST00000460616 IL17AQ16552 155 aa17.18■□□□□ 0.34
SSR4-206ENST00000460616 WLSQ5T9L3 541 aa17.18■□□□□ 0.34
SSR4-206ENST00000460616 CLEC4GQ6UXB4 293 aa17.18■□□□□ 0.34
SSR4-206ENST00000460616 ALS2CR12Q96Q35 445 aa17.18■□□□□ 0.34
SSR4-206ENST00000460616 MTA3Q9BTC8 594 aa17.18■□□□□ 0.34
SSR4-206ENST00000460616 NFU1Q9UMS0 254 aa17.18■□□□□ 0.34
SSR4-206ENST00000460616 FAM153BP0C7A2 387 aa17.17■□□□□ 0.34
SSR4-206ENST00000460616 CARSP49589 748 aaKnown RBP17.17■□□□□ 0.34
SSR4-206ENST00000460616 DRP2Q13474 957 aa17.17■□□□□ 0.34
SSR4-206ENST00000460616 FAM153CQ494X1 144 aa17.17■□□□□ 0.34
SSR4-206ENST00000460616 CCDC24Q8N4L8 307 aa17.17■□□□□ 0.34
SSR4-206ENST00000460616 IFT81Q8WYA0 676 aa17.17■□□□□ 0.34
SSR4-206ENST00000460616 MIEF2Q96C03 454 aa17.17■□□□□ 0.34
SSR4-206ENST00000460616 RBM12Q9NTZ6 932 aaKnown RBP17.17■□□□□ 0.34
SSR4-206ENST00000460616 STK32BQ9NY57 414 aa17.17■□□□□ 0.34
SSR4-206ENST00000460616 FAM153AQ9UHL3 310 aa17.17■□□□□ 0.34
SSR4-206ENST00000460616 TRMT112Q9UI30 125 aaKnown RBP17.17■□□□□ 0.34
SSR4-206ENST00000460616 E7EVH7 732 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 PSMA7O14818 248 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 PRPF3O43395 683 aaKnown RBP17.16■□□□□ 0.34
SSR4-206ENST00000460616 PRKAB2O43741 272 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 CSF1RP07333 972 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 PLEKP08567 350 aaPredicted RBP17.16■□□□□ 0.34
SSR4-206ENST00000460616 IQCA1Q86XH1 822 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 MAGEB6Q8N7X4 407 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 CCDC114Q96M63 670 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 NACAP1Q9BZK3 213 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 NTSR2O95665 410 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 GLI1P08151 1106 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 MCM7P33993 719 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 STAT6P42226 847 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 PHKA1P46020 1223 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 ATP2B2Q01814 1243 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 NFIXQ14938 502 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 MSL1Q68DK7 614 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 C6orf89Q6UWU4 347 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 CD302Q8IX05 232 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 NOC3LQ8WTT2 800 aaKnown RBP17.16■□□□□ 0.34
SSR4-206ENST00000460616 TNFRSF25Q93038 417 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 EEF2KMTQ96G04 330 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 ATP6V1G3Q96LB4 118 aa17.16■□□□□ 0.34
SSR4-206ENST00000460616 TYW1BQ6NUM6 668 aa17.15■□□□□ 0.34
SSR4-206ENST00000460616 CCDC121Q6ZUS5 278 aa17.15■□□□□ 0.34
SSR4-206ENST00000460616 CSGALNACT2Q8N6G5 542 aa17.15■□□□□ 0.34
SSR4-206ENST00000460616 ZBTB38Q8NAP3 1195 aaPredicted RBP17.15■□□□□ 0.34
SSR4-206ENST00000460616 TTLL11Q8NHH1 800 aa17.15■□□□□ 0.34
SSR4-206ENST00000460616 PIK3R5Q8WYR1 880 aa17.15■□□□□ 0.34
SSR4-206ENST00000460616 EPB41L5Q9HCM4 733 aa17.15■□□□□ 0.34
SSR4-206ENST00000460616 GDF3Q9NR23 364 aa17.15■□□□□ 0.34
SSR4-206ENST00000460616 CNNM1Q9NRU3 951 aa17.15■□□□□ 0.34
SSR4-206ENST00000460616 MYH7P12883 1935 aa17.15■□□□□ 0.34
SSR4-206ENST00000460616 LAMB2P55268 1798 aa17.15■□□□□ 0.34
SSR4-206ENST00000460616 GOLGA6L7A0A1B0GV03 622 aa17.15■□□□□ 0.34
SSR4-206ENST00000460616 TMCO5BA8MYB1 307 aa17.15■□□□□ 0.34
SSR4-206ENST00000460616 NCK2O43639 380 aa17.15■□□□□ 0.34
SSR4-206ENST00000460616 PCCAP05165 728 aaPredicted RBP17.15■□□□□ 0.34
SSR4-206ENST00000460616 PAK2Q13177 524 aa17.15■□□□□ 0.34
SSR4-206ENST00000460616 SNCBQ16143 134 aa17.15■□□□□ 0.34
SSR4-206ENST00000460616 TTI2Q6NXR4 508 aa17.15■□□□□ 0.34
SSR4-206ENST00000460616 CEP57Q86XR8 500 aa17.15■□□□□ 0.34
SSR4-206ENST00000460616 A0A1W2PQJ5 194 aa17.14■□□□□ 0.34
SSR4-206ENST00000460616 HMGB1P1B2RPK0 211 aaPredicted RBP17.14■□□□□ 0.34
SSR4-206ENST00000460616 IBSPP21815 317 aaPredicted RBP17.14■□□□□ 0.34
SSR4-206ENST00000460616 GUCY2FP51841 1108 aa17.14■□□□□ 0.34
SSR4-206ENST00000460616 GUCY2DQ02846 1103 aa17.14■□□□□ 0.34
SSR4-206ENST00000460616 MAP3K12Q12852 859 aa17.14■□□□□ 0.34
SSR4-206ENST00000460616 CFAP221Q4G0U5 840 aa17.14■□□□□ 0.34
SSR4-206ENST00000460616 RNF41Q9H4P4 317 aaPredicted RBP17.14■□□□□ 0.34
SSR4-206ENST00000460616 ACTR5Q9H9F9 607 aaPredicted RBP17.14■□□□□ 0.34
SSR4-206ENST00000460616 PPANQ9NQ55 473 aaKnown RBP17.14■□□□□ 0.34
SSR4-206ENST00000460616 RIC1Q4ADV7 1423 aa17.14■□□□□ 0.33
SSR4-206ENST00000460616 ESYT3A0FGR9 886 aa17.14■□□□□ 0.33
SSR4-206ENST00000460616 SRRM3A6NNA2 597 aaPredicted RBP17.14■□□□□ 0.33
SSR4-206ENST00000460616 CLSTN1O94985 981 aa17.14■□□□□ 0.33
SSR4-206ENST00000460616 UQCRFS1P1P0C7P4 283 aa17.14■□□□□ 0.33
SSR4-206ENST00000460616 FUT2Q10981 343 aa17.14■□□□□ 0.33
SSR4-206ENST00000460616 ITGB3BPQ13352 177 aaPredicted RBP17.14■□□□□ 0.33
SSR4-206ENST00000460616 PPP4R3AQ6IN85 833 aa17.14■□□□□ 0.33
SSR4-206ENST00000460616 PIK3AP1Q6ZUJ8 805 aa17.14■□□□□ 0.33
SSR4-206ENST00000460616 C2CD5Q86YS7 1000 aa17.14■□□□□ 0.33
SSR4-206ENST00000460616 PARP9Q8IXQ6 854 aa17.14■□□□□ 0.33
SSR4-206ENST00000460616 MREGQ8N565 214 aa17.14■□□□□ 0.33
SSR4-206ENST00000460616 C1orf131Q8NDD1 294 aaKnown RBP17.14■□□□□ 0.33
SSR4-206ENST00000460616 SLC4A4Q9Y6R1 1079 aa17.14■□□□□ 0.33
SSR4-206ENST00000460616 HEXIM1O94992 359 aaKnown RBP17.13■□□□□ 0.33
SSR4-206ENST00000460616 ARID4AP29374 1257 aaPredicted RBP17.13■□□□□ 0.33
SSR4-206ENST00000460616 MTIF2P46199 727 aaKnown RBP17.13■□□□□ 0.33
SSR4-206ENST00000460616 KIF11P52732 1056 aa17.13■□□□□ 0.33
SSR4-206ENST00000460616 KCNB1Q14721 858 aa17.13■□□□□ 0.33
SSR4-206ENST00000460616 NPY5RQ15761 445 aa17.13■□□□□ 0.33
SSR4-206ENST00000460616 FIGNQ5HY92 759 aa17.13■□□□□ 0.33
SSR4-206ENST00000460616 CCDC50Q8IVM0 306 aa17.13■□□□□ 0.33
SSR4-206ENST00000460616 CYFIP2Q96F07 1278 aa17.13■□□□□ 0.33
SSR4-206ENST00000460616 MS4A14Q96JA4 679 aa17.13■□□□□ 0.33
SSR4-206ENST00000460616 SETDB2Q96T68 719 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms