RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 TXNP10599 105 aaKnown RBP24.27■■□□□ 1.48
SRM-202ENST00000459997 SLC35G1Q2M3R5 365 aa24.27■■□□□ 1.48
SRM-202ENST00000459997 BMP2KLQ5H9B9 411 aa24.27■■□□□ 1.48
SRM-202ENST00000459997 COPS5Q92905 334 aa24.27■■□□□ 1.48
SRM-202ENST00000459997 SEZ6LQ9BYH1 1024 aa24.27■■□□□ 1.48
SRM-202ENST00000459997 ANO2Q9NQ90 1003 aa24.27■■□□□ 1.48
SRM-202ENST00000459997 PCDHA1Q9Y5I3 950 aa24.27■■□□□ 1.48
SRM-202ENST00000459997 OPLAHO14841 1288 aa24.26■■□□□ 1.47
SRM-202ENST00000459997 MYL3P08590 195 aa24.26■■□□□ 1.47
SRM-202ENST00000459997 TTLL4Q14679 1199 aa24.26■■□□□ 1.47
SRM-202ENST00000459997 BRDTQ58F21 947 aaPredicted RBP24.26■■□□□ 1.47
SRM-202ENST00000459997 ARHGEF16Q5VV41 709 aa24.26■■□□□ 1.47
SRM-202ENST00000459997 MFSD5Q6N075 450 aa24.26■■□□□ 1.47
SRM-202ENST00000459997 CASC1Q6TDU7 716 aa24.26■■□□□ 1.47
SRM-202ENST00000459997 RNPC3Q96LT9 517 aaKnown RBP24.26■■□□□ 1.47
SRM-202ENST00000459997 PIGSQ96S52 555 aa24.26■■□□□ 1.47
SRM-202ENST00000459997 IWS1Q96ST2 819 aa24.26■■□□□ 1.47
SRM-202ENST00000459997 PPP1R12CQ9BZL4 782 aa24.26■■□□□ 1.47
SRM-202ENST00000459997 RIOX1Q9H6W3 641 aa24.26■■□□□ 1.47
SRM-202ENST00000459997 SLC27A2O14975 620 aa24.25■■□□□ 1.47
SRM-202ENST00000459997 PRC1O43663 620 aa24.25■■□□□ 1.47
SRM-202ENST00000459997 ARIH2O95376 493 aa24.25■■□□□ 1.47
SRM-202ENST00000459997 EIF2AK2P19525 551 aaKnown RBP24.25■■□□□ 1.47
SRM-202ENST00000459997 HSD17B4P51659 736 aa24.25■■□□□ 1.47
SRM-202ENST00000459997 PURAQ00577 322 aaKnown RBP24.25■■□□□ 1.47
SRM-202ENST00000459997 STXBP2Q15833 593 aa24.25■■□□□ 1.47
SRM-202ENST00000459997 SEPT14Q6ZU15 432 aa24.25■■□□□ 1.47
SRM-202ENST00000459997 LY9Q9HBG7 655 aa24.25■■□□□ 1.47
SRM-202ENST00000459997 GPHNQ9NQX3 736 aaPredicted RBP24.25■■□□□ 1.47
SRM-202ENST00000459997 CYTH3O43739 400 aa24.24■■□□□ 1.47
SRM-202ENST00000459997 TRAF1Q13077 416 aa24.24■■□□□ 1.47
SRM-202ENST00000459997 ZNF654Q8IZM8 581 aa24.24■■□□□ 1.47
SRM-202ENST00000459997 TRPV6Q9H1D0 765 aa24.24■■□□□ 1.47
SRM-202ENST00000459997 PXMP2Q9NR77 195 aa24.24■■□□□ 1.47
SRM-202ENST00000459997 MTMR10Q9NXD2 777 aa24.24■■□□□ 1.47
SRM-202ENST00000459997 B4GALT4O60513 344 aa24.23■■□□□ 1.47
SRM-202ENST00000459997 MCM5P33992 734 aa24.23■■□□□ 1.47
SRM-202ENST00000459997 GHRHRQ02643 423 aa24.23■■□□□ 1.47
SRM-202ENST00000459997 PPIGQ13427 754 aaKnown RBP eCLIP24.23■■□□□ 1.472e-6■□□□□ 8.9
SRM-202ENST00000459997 CREB3L3Q68CJ9 461 aa24.23■■□□□ 1.47
SRM-202ENST00000459997 FAM109BQ6ICB4 259 aaPredicted RBP24.23■■□□□ 1.47
SRM-202ENST00000459997 CCDC62Q6P9F0 684 aa24.23■■□□□ 1.47
SRM-202ENST00000459997 TMEM199Q8N511 208 aa24.23■■□□□ 1.47
SRM-202ENST00000459997 MTG1Q9BT17 334 aaPredicted RBP24.23■■□□□ 1.47
SRM-202ENST00000459997 MYL10Q9BUA6 226 aa24.23■■□□□ 1.47
SRM-202ENST00000459997 KIAA1217Q5T5P2 1943 aa24.23■■□□□ 1.47
SRM-202ENST00000459997 PNMA6FA0A0J9YX94 578 aa24.22■■□□□ 1.47
SRM-202ENST00000459997 A6NJR5 290 aa24.22■■□□□ 1.47
SRM-202ENST00000459997 CSF2RAP15509 400 aa24.22■■□□□ 1.47
SRM-202ENST00000459997 HOXA13P31271 388 aaPredicted RBP24.22■■□□□ 1.47
SRM-202ENST00000459997 CYP2C18P33260 490 aa24.22■■□□□ 1.47
SRM-202ENST00000459997 NECTIN1Q15223 517 aa24.22■■□□□ 1.47
SRM-202ENST00000459997 LY6KQ17RY6 165 aa24.22■■□□□ 1.47
SRM-202ENST00000459997 CTCFLQ8NI51 663 aaPredicted RBP24.22■■□□□ 1.47
SRM-202ENST00000459997 MTA3Q9BTC8 594 aa24.22■■□□□ 1.47
SRM-202ENST00000459997 ALDH8A1Q9H2A2 487 aaPredicted RBP24.22■■□□□ 1.47
SRM-202ENST00000459997 HIPK3Q9H422 1215 aa24.22■■□□□ 1.47
SRM-202ENST00000459997 MAP3K20Q9NYL2 800 aaKnown RBP24.22■■□□□ 1.47
SRM-202ENST00000459997 KPNA6O60684 536 aa24.21■■□□□ 1.47
SRM-202ENST00000459997 EIF3JO75822 258 aaKnown RBP24.21■■□□□ 1.47
SRM-202ENST00000459997 DDAH1O94760 285 aa24.21■■□□□ 1.47
SRM-202ENST00000459997 NR3C2P08235 984 aa24.21■■□□□ 1.47
SRM-202ENST00000459997 SMAD3P84022 425 aaKnown RBP24.21■■□□□ 1.47
SRM-202ENST00000459997 NFXL1Q6ZNB6 911 aa24.21■■□□□ 1.47
SRM-202ENST00000459997 SAMD3Q8N6K7 520 aa24.21■■□□□ 1.47
SRM-202ENST00000459997 PIBF1Q8WXW3 757 aa24.21■■□□□ 1.47
SRM-202ENST00000459997 TMEM87BQ96K49 555 aa24.21■■□□□ 1.47
SRM-202ENST00000459997 MAP3K14Q99558 947 aa24.21■■□□□ 1.47
SRM-202ENST00000459997 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.21■■□□□ 1.478e-13■□□□□ 11.3
SRM-202ENST00000459997 UMODL1Q5DID0 1318 aa24.2■■□□□ 1.46
SRM-202ENST00000459997 SH2B2O14492 632 aaPredicted RBP24.2■■□□□ 1.46
SRM-202ENST00000459997 GH1P01241 217 aa24.2■■□□□ 1.46
SRM-202ENST00000459997 NEFLP07196 543 aa24.2■■□□□ 1.46
SRM-202ENST00000459997 KIF5BP33176 963 aa24.2■■□□□ 1.46
SRM-202ENST00000459997 COL9A3Q14050 684 aaPredicted RBP24.2■■□□□ 1.46
SRM-202ENST00000459997 ZNF697Q5TEC3 545 aa24.2■■□□□ 1.46
SRM-202ENST00000459997 FAM161BQ96MY7 647 aa24.2■■□□□ 1.46
SRM-202ENST00000459997 BAZ2BQ9UIF8 2168 aaKnown RBP24.2■■□□□ 1.46
SRM-202ENST00000459997 CCDC69A6NI79 296 aa24.19■■□□□ 1.46
SRM-202ENST00000459997 GCOM1H8Y6P7 765 aaPredicted RBP24.19■■□□□ 1.46
SRM-202ENST00000459997 CENPBP07199 599 aaPredicted RBP24.19■■□□□ 1.46
SRM-202ENST00000459997 POLR2MP0CAP2 368 aa24.19■■□□□ 1.46
SRM-202ENST00000459997 MYCLP12524 364 aaPredicted RBP24.19■■□□□ 1.46
SRM-202ENST00000459997 ARHGAP1Q07960 439 aa24.19■■□□□ 1.46
SRM-202ENST00000459997 NBPF20Q3BBV1 942 aa24.19■■□□□ 1.46
SRM-202ENST00000459997 FAM47CQ5HY64 1035 aa24.19■■□□□ 1.46
SRM-202ENST00000459997 C16orf59Q7L2K0 433 aa24.19■■□□□ 1.46
SRM-202ENST00000459997 TMTC2Q8N394 836 aa24.19■■□□□ 1.46
SRM-202ENST00000459997 AFG1LQ8WV93 481 aa24.19■■□□□ 1.46
SRM-202ENST00000459997 CCDC136Q96JN2 1154 aa24.19■■□□□ 1.46
SRM-202ENST00000459997 PDCD2LQ9BRP1 358 aa24.19■■□□□ 1.46
SRM-202ENST00000459997 NOC4LQ9BVI4 516 aaKnown RBP24.19■■□□□ 1.46
SRM-202ENST00000459997 TRMT13Q9NUP7 481 aaKnown RBP24.19■■□□□ 1.46
SRM-202ENST00000459997 ACRP10323 421 aa24.18■■□□□ 1.46
SRM-202ENST00000459997 SPZ1Q9BXG8 430 aa24.18■■□□□ 1.46
SRM-202ENST00000459997 STXBP5LQ9Y2K9 1186 aa24.18■■□□□ 1.46
SRM-202ENST00000459997 MRVI1Q9Y6F6 885 aa24.18■■□□□ 1.46
SRM-202ENST00000459997 SCN10AQ9Y5Y9 1956 aa24.18■■□□□ 1.46
SRM-202ENST00000459997 CDC45O75419 566 aa24.17■■□□□ 1.46
SRM-202ENST00000459997 MMP3P08254 477 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms