RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CDC37Q16543 378 aaPredicted RBP10.19□□□□□ -0.78
VPS50-207ENST00000458530 CCL15Q16663 113 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 TTC38Q5R3I4 469 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 SCYL3Q8IZE3 742 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 KRI1Q8N9T8 703 aaKnown RBP10.19□□□□□ -0.78
VPS50-207ENST00000458530 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.19□□□□□ -0.78
VPS50-207ENST00000458530 PTCD2Q8WV60 388 aaKnown RBP10.19□□□□□ -0.78
VPS50-207ENST00000458530 CUL5Q93034 780 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 TNFRSF25Q93038 417 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 FERMT2Q96AC1 680 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 CCDC34Q96HJ3 373 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 NAP1L4Q99733 375 aaKnown RBP10.19□□□□□ -0.78
VPS50-207ENST00000458530 UBA5Q9GZZ9 404 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 ELP3Q9H9T3 547 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 JMJD4Q9H9V9 463 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 TMEM63CQ9P1W3 806 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 FEM1BQ9UK73 627 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 MYH7BA7E2Y1 1941 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 PTPRFP10586 1907 aa10.19□□□□□ -0.78
VPS50-207ENST00000458530 SPDYE5A6NIY4 337 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 TMEM232C9JQI7 657 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 LAD1O00515 517 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 WDR46O15213 610 aaKnown RBP10.18□□□□□ -0.78
VPS50-207ENST00000458530 GJB1P08034 283 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 RRP1BQ14684 758 aaKnown RBP10.18□□□□□ -0.78
VPS50-207ENST00000458530 NONOQ15233 471 aaKnown RBP eCLIP10.18□□□□□ -0.78
VPS50-207ENST00000458530 MTFR1Q15390 333 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 PPP1R15BQ5SWA1 713 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 C17orf99Q6UX52 265 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 PIK3AP1Q6ZUJ8 805 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 RASGRP2Q7LDG7 609 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 SIAH1Q8IUQ4 282 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 CCAR1Q8IX12 1150 aaKnown RBP10.18□□□□□ -0.78
VPS50-207ENST00000458530 FSIP1Q8NA03 581 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 OXER1Q8TDS5 423 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 PGBD1Q96JS3 809 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 WRNIP1Q96S55 665 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 PYM1Q9BRP8 204 aaKnown RBP10.18□□□□□ -0.78
VPS50-207ENST00000458530 AMNQ9BXJ7 453 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 FTOQ9C0B1 505 aaKnown RBP eCLIP10.18□□□□□ -0.78
VPS50-207ENST00000458530 KIAA1683Q9H0B3 1180 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 FAM13BQ9NYF5 915 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 ZNF112Q9UJU3 913 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 PCDHA7Q9UN72 937 aa10.18□□□□□ -0.78
VPS50-207ENST00000458530 USP17L10C9JJH3 530 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 SLURP2P0DP57 97 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 FDX1P10109 184 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 CMA1P23946 247 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 MAP3K9P80192 1104 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 PTPAQ15257 358 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 NPY5RQ15761 445 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 SHROOM1Q2M3G4 852 aaPredicted RBP10.17□□□□□ -0.78
VPS50-207ENST00000458530 SLC35G1Q2M3R5 365 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 QRICH1Q2TAL8 776 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 NOL9Q5SY16 702 aaKnown RBP10.17□□□□□ -0.78
VPS50-207ENST00000458530 ARL6IP4Q66PJ3 421 aaKnown RBP10.17□□□□□ -0.78
VPS50-207ENST00000458530 TTBK2Q6IQ55 1244 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 LRSAM1Q6UWE0 723 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 FBXO11Q86XK2 927 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 WDR18Q9BV38 432 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 TNMDQ9H2S6 317 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 CPVLQ9H3G5 476 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 CLSTN2Q9H4D0 955 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 RIC8AQ9NPQ8 531 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 DACT1Q9NYF0 836 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 SRRDQ9UH36 339 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 HOOK1Q9UJC3 728 aaKnown RBP10.17□□□□□ -0.78
VPS50-207ENST00000458530 PCDHA6Q9UN73 950 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 PCDHA8Q9Y5H6 950 aa10.17□□□□□ -0.78
VPS50-207ENST00000458530 A0A1W2PRG0 241 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 C19orf81C9J6K1 198 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 BTBD19C9JJ37 291 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 M0R2N6 131 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 ATP2B1P20020 1258 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 SLC16A2P36021 539 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 JAG1P78504 1218 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 AP3B2Q13367 1082 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 TPRNQ4KMQ1 711 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 FAM83BQ5T0W9 1011 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 ACER1Q8TDN7 264 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 TRIM47Q96LD4 638 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 HTATIP2Q9BUP3 242 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 TSPY26PQ9H489 355 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 EHMT1Q9H9B1 1298 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 CTDP1Q9Y5B0 961 aaPredicted RBP10.16□□□□□ -0.78
VPS50-207ENST00000458530 PCDHA1Q9Y5I3 950 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 SRPRBQ9Y5M8 271 aaKnown RBP10.16□□□□□ -0.78
VPS50-207ENST00000458530 CSADQ9Y600 493 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 SNCAIPQ9Y6H5 919 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 LOC285556D6RIA3 1793 aa10.16□□□□□ -0.78
VPS50-207ENST00000458530 COL11A1P12107 1806 aaPredicted RBP10.15□□□□□ -0.78
VPS50-207ENST00000458530 SYCE3A1L190 88 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 FOSP01100 380 aaPredicted RBP10.15□□□□□ -0.78
VPS50-207ENST00000458530 CCDC192P0DO97 292 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 CETPP11597 493 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 GCFC2P16383 781 aaKnown RBP10.15□□□□□ -0.78
VPS50-207ENST00000458530 LIG1P18858 919 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 PTPREP23469 700 aa10.15□□□□□ -0.78
VPS50-207ENST00000458530 MARCKSP29966 332 aaPredicted RBP10.15□□□□□ -0.78
VPS50-207ENST00000458530 TXLNAP40222 546 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms