RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 PARP14Q460N5 1801 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 ZNF536O15090 1300 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 CYP3A7-CYP3A51PA0A087WV96 503 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 SLC26A4O43511 780 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 OR52Z1P0C646 297 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 ATP2B1P20020 1258 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 CYP3A7P24462 503 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 MARCKSP29966 332 aaPredicted RBP10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 MCM7P33993 719 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 TXLNAP40222 546 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 JAKMIP3Q5VZ66 844 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 MAP1SQ66K74 1059 aaPredicted RBP10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 CCDC174Q6PII3 467 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 ENGASEQ8NFI3 743 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 RASGRP4Q8TDF6 673 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 RNF166Q96A37 237 aaPredicted RBP10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 TEX13BQ9BXU2 312 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 RAB34Q9BZG1 259 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 CLSTN2Q9H4D0 955 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 ELP3Q9H9T3 547 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 GBA2Q9HCG7 927 aaPredicted RBP10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 DACT1Q9NYF0 836 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 TMEM63CQ9P1W3 806 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 USP25Q9UHP3 1055 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 HOOK1Q9UJC3 728 aaKnown RBP10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 AGTPBP1Q9UPW5 1226 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 HPSEQ9Y251 543 aa10.12□□□□□ -0.79
CDC42EP3-204ENST00000457889 OPLAHO14841 1288 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 IRF6O14896 467 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 TBX3O15119 743 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 CCNT1O60563 726 aaKnown RBP10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 CYP3A4P08684 503 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 ZBTB48P10074 688 aaPredicted RBP10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 LIG1P18858 919 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 CIITAP33076 1130 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 HSD17B4P51659 736 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 ZNF174Q15697 407 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 LETM2Q2VYF4 491 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 KANK3Q6NY19 840 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 XRRA1Q6P2D8 792 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 DTHD1Q6ZMT9 781 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 RBM43Q6ZSC3 357 aaKnown RBP10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 FMR1NBQ8N0W7 255 aaPredicted RBP10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 ZNF687Q8N1G0 1237 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 C4orf32Q8N8J7 132 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 REPS2Q8NFH8 660 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 CRYGNQ8WXF5 182 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 OPTNQ96CV9 577 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 SLC10A4Q96EP9 437 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 MBOAT7Q96N66 472 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 FBXO40Q9UH90 709 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 PNMA3Q9UL41 463 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 FZD1Q9UP38 647 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 STK24Q9Y6E0 443 aa10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 RBBP6Q7Z6E9 1792 aaKnown RBP10.11□□□□□ -0.79
CDC42EP3-204ENST00000457889 A0A0G2JMZ2 1700 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 RLFQ13129 1914 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 SPDYE16A6NNV3 312 aaPredicted RBP10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 NR1I2O75469 434 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 CAVIN2O95810 425 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 CETPP11597 493 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 PFKFB1P16118 471 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 OSBPP22059 807 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 SYKP43405 635 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 GTF2A2P52657 109 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 IRX3P78415 501 aaPredicted RBP10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 ARHGAP4P98171 946 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 SNW1Q13573 536 aaKnown RBP10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 CALCRLQ16602 461 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 UBE2SQ16763 222 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 TMEM266Q2M3C6 531 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 NOM1Q5C9Z4 860 aaKnown RBP10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 USP17L6PQ6QN14 398 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 SHC4Q6S5L8 630 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 SLFN12Q8IYM2 578 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 CHST13Q8NET6 341 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 FBXO22Q8NEZ5 403 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 ATG4CQ96DT6 458 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 CLMNQ96JQ2 1002 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 GZF1Q9H116 711 aaPredicted RBP10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 TNMDQ9H2S6 317 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 NMRK2Q9NPI5 230 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 TMEM260Q9NX78 707 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 ZNF214Q9UL59 606 aaPredicted RBP10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 KCNH3Q9ULD8 1083 aa10.1□□□□□ -0.79
CDC42EP3-204ENST00000457889 FRMPD4Q14CM0 1322 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 TRAF5O00463 557 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 ADAMTS3O15072 1205 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 ZNF202O95125 648 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 CELF2O95319 508 aaKnown RBP10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 CFBP00751 764 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 NDUFA8P51970 172 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 SNAP25P60880 206 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 SETQ01105 290 aaPredicted RBP10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 PDIA5Q14554 519 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 Q4G0T1 1027 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 LRSAM1Q6UWE0 723 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 DLK2Q6UY11 383 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 GADL1Q6ZQY3 521 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms