RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 SAMD3Q8N6K7 520 aa11.61□□□□□ -0.55
ATG4A-206ENST00000457035 IL27Q8NEV9 243 aa11.61□□□□□ -0.55
ATG4A-206ENST00000457035 PHKBQ93100 1093 aa11.61□□□□□ -0.55
ATG4A-206ENST00000457035 TINF2Q9BSI4 451 aa11.61□□□□□ -0.55
ATG4A-206ENST00000457035 SLKQ9H2G2 1235 aaPredicted RBP11.61□□□□□ -0.55
ATG4A-206ENST00000457035 MAP3K20Q9NYL2 800 aaKnown RBP11.61□□□□□ -0.55
ATG4A-206ENST00000457035 LIMCH1Q9UPQ0 1083 aa11.61□□□□□ -0.55
ATG4A-206ENST00000457035 SNAI1O95863 264 aaPredicted RBP11.6□□□□□ -0.55
ATG4A-206ENST00000457035 CFBP00751 764 aa11.6□□□□□ -0.55
ATG4A-206ENST00000457035 CALML3P27482 149 aa11.6□□□□□ -0.55
ATG4A-206ENST00000457035 HSD17B4P51659 736 aa11.6□□□□□ -0.55
ATG4A-206ENST00000457035 PFKFB3Q16875 520 aaPredicted RBP11.6□□□□□ -0.55
ATG4A-206ENST00000457035 MFSD14CQ5VZR4 134 aa11.6□□□□□ -0.55
ATG4A-206ENST00000457035 TYW1BQ6NUM6 668 aa11.6□□□□□ -0.55
ATG4A-206ENST00000457035 NOL8Q76FK4 1167 aaKnown RBP11.6□□□□□ -0.55
ATG4A-206ENST00000457035 MSL3Q8N5Y2 521 aaKnown RBP11.6□□□□□ -0.55
ATG4A-206ENST00000457035 TRPV1Q8NER1 839 aa11.6□□□□□ -0.55
ATG4A-206ENST00000457035 SYTL5Q8TDW5 730 aaPredicted RBP11.6□□□□□ -0.55
ATG4A-206ENST00000457035 GPKOWQ92917 476 aaPredicted RBP eCLIP11.6□□□□□ -0.55
ATG4A-206ENST00000457035 RNF26Q9BY78 433 aaPredicted RBP11.6□□□□□ -0.55
ATG4A-206ENST00000457035 UNC93B1Q9H1C4 597 aa11.6□□□□□ -0.55
ATG4A-206ENST00000457035 COL20A1Q9P218 1284 aa11.6□□□□□ -0.55
ATG4A-206ENST00000457035 KIAA1217Q5T5P2 1943 aa11.6□□□□□ -0.55
ATG4A-206ENST00000457035 RPTORQ8N122 1335 aa11.6□□□□□ -0.55
ATG4A-206ENST00000457035 MEIS2O14770 477 aa11.59□□□□□ -0.55
ATG4A-206ENST00000457035 PPFIA3O75145 1194 aa11.59□□□□□ -0.55
ATG4A-206ENST00000457035 CTDNEP1O95476 244 aa11.59□□□□□ -0.55
ATG4A-206ENST00000457035 CCL5P13501 91 aa11.59□□□□□ -0.55
ATG4A-206ENST00000457035 PRAMEF19Q5SWL8 479 aa11.59□□□□□ -0.55
ATG4A-206ENST00000457035 WWC2Q6AWC2 1192 aa11.59□□□□□ -0.55
ATG4A-206ENST00000457035 NECAB1Q8N987 351 aa11.59□□□□□ -0.55
ATG4A-206ENST00000457035 DNERQ8NFT8 737 aa11.59□□□□□ -0.55
ATG4A-206ENST00000457035 MORC4Q8TE76 937 aa11.59□□□□□ -0.55
ATG4A-206ENST00000457035 GTF3C6Q969F1 213 aa11.59□□□□□ -0.55
ATG4A-206ENST00000457035 TAAR1Q96RJ0 339 aa11.59□□□□□ -0.55
ATG4A-206ENST00000457035 SLC26A6Q9BXS9 759 aa11.59□□□□□ -0.55
ATG4A-206ENST00000457035 BARHL2Q9NY43 387 aa11.59□□□□□ -0.55
ATG4A-206ENST00000457035 RBM27Q9P2N5 1060 aaKnown RBP11.59□□□□□ -0.55
ATG4A-206ENST00000457035 DDX49Q9Y6V7 483 aaKnown RBP11.59□□□□□ -0.55
ATG4A-206ENST00000457035 SYNGAP1Q96PV0 1343 aa11.59□□□□□ -0.55
ATG4A-206ENST00000457035 MYH7BA7E2Y1 1941 aa11.58□□□□□ -0.55
ATG4A-206ENST00000457035 LOC102724159A0A0B4J2E5 919 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 ASB14A6NK59 587 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 GCOM1H8Y6P7 765 aaPredicted RBP11.58□□□□□ -0.56
ATG4A-206ENST00000457035 hCG_1984214I3L0E3 225 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 STXBP3O00186 592 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 PIK3CDO00329 1044 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 CPLX1O14810 134 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 CD2BP2O95400 341 aaKnown RBP11.58□□□□□ -0.56
ATG4A-206ENST00000457035 POLR2MP0CAP2 368 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 ZNF865P0CJ78 1059 aaPredicted RBP11.58□□□□□ -0.56
ATG4A-206ENST00000457035 CYBAP13498 195 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 SCG2P13521 617 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 CCND3P30281 292 aaPredicted RBP11.58□□□□□ -0.56
ATG4A-206ENST00000457035 HOXA13P31271 388 aaPredicted RBP11.58□□□□□ -0.56
ATG4A-206ENST00000457035 ALDH5A1P51649 535 aaPredicted RBP11.58□□□□□ -0.56
ATG4A-206ENST00000457035 SSRP1Q08945 709 aaKnown RBP11.58□□□□□ -0.56
ATG4A-206ENST00000457035 ST3GAL1Q11201 340 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 PWP2Q15269 919 aaKnown RBP11.58□□□□□ -0.56
ATG4A-206ENST00000457035 CPLX2Q6PUV4 134 aaKnown RBP11.58□□□□□ -0.56
ATG4A-206ENST00000457035 USP17L6PQ6QN14 398 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 ARMCX2Q7L311 632 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 HEATR3Q7Z4Q2 680 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 ZNF713Q8N859 430 aaPredicted RBP11.58□□□□□ -0.56
ATG4A-206ENST00000457035 SHISA4Q96DD7 197 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 ZSCAN31Q96LW9 406 aaPredicted RBP11.58□□□□□ -0.56
ATG4A-206ENST00000457035 KATNBL1Q9H079 304 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 RNF208Q9H0X6 261 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 PSTPIP2Q9H939 334 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 HMX1Q9NP08 348 aaPredicted RBP11.58□□□□□ -0.56
ATG4A-206ENST00000457035 PAK6Q9NQU5 681 aaPredicted RBP11.58□□□□□ -0.56
ATG4A-206ENST00000457035 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.58□□□□□ -0.56
ATG4A-206ENST00000457035 ADD3Q9UEY8 706 aaKnown RBP11.58□□□□□ -0.56
ATG4A-206ENST00000457035 NRBP1Q9UHY1 535 aa11.58□□□□□ -0.56
ATG4A-206ENST00000457035 DTNBO60941 627 aa11.57□□□□□ -0.56
ATG4A-206ENST00000457035 GJB1P08034 283 aa11.57□□□□□ -0.56
ATG4A-206ENST00000457035 FDPSP14324 419 aaKnown RBP11.57□□□□□ -0.56
ATG4A-206ENST00000457035 EDNRBP24530 442 aa11.57□□□□□ -0.56
ATG4A-206ENST00000457035 AKAP17AQ02040 695 aaKnown RBP11.57□□□□□ -0.56
ATG4A-206ENST00000457035 HABP4Q5JVS0 413 aaKnown RBP11.57□□□□□ -0.56
ATG4A-206ENST00000457035 TRIM22Q8IYM9 498 aa11.57□□□□□ -0.56
ATG4A-206ENST00000457035 NSUN6Q8TEA1 469 aaKnown RBP11.57□□□□□ -0.56
ATG4A-206ENST00000457035 RMDN3Q96TC7 470 aa11.57□□□□□ -0.56
ATG4A-206ENST00000457035 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.57□□□□□ -0.56
ATG4A-206ENST00000457035 ABHD16BQ9H3Z7 469 aa11.57□□□□□ -0.56
ATG4A-206ENST00000457035 SMCO2A6NFE2 343 aa11.56□□□□□ -0.56
ATG4A-206ENST00000457035 ST18O60284 1047 aa11.56□□□□□ -0.56
ATG4A-206ENST00000457035 CDKL5O76039 1030 aa11.56□□□□□ -0.56
ATG4A-206ENST00000457035 DEXIO95424 95 aa11.56□□□□□ -0.56
ATG4A-206ENST00000457035 SGPL1O95470 568 aa11.56□□□□□ -0.56
ATG4A-206ENST00000457035 NAPAP54920 295 aa11.56□□□□□ -0.56
ATG4A-206ENST00000457035 ACVR2BQ13705 512 aa11.56□□□□□ -0.56
ATG4A-206ENST00000457035 PPP1R18Q6NYC8 613 aa11.56□□□□□ -0.56
ATG4A-206ENST00000457035 FCHSD1Q86WN1 690 aa11.56□□□□□ -0.56
ATG4A-206ENST00000457035 TEX2Q8IWB9 1127 aa11.56□□□□□ -0.56
ATG4A-206ENST00000457035 NSUN7Q8NE18 718 aaKnown RBP11.56□□□□□ -0.56
ATG4A-206ENST00000457035 IWS1Q96ST2 819 aa11.56□□□□□ -0.56
ATG4A-206ENST00000457035 ZMYND12Q9H0C1 365 aa11.56□□□□□ -0.56
ATG4A-206ENST00000457035 RIC8AQ9NPQ8 531 aa11.56□□□□□ -0.56
ATG4A-206ENST00000457035 PXMP2Q9NR77 195 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms