RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 CREG2Q8IUH2 290 aa14.28□□□□□ -0.12
LINC00473-202ENST00000455853 CAPS2Q9BXY5 557 aa14.28□□□□□ -0.12
LINC00473-202ENST00000455853 LRRC27Q9C0I9 530 aa14.28□□□□□ -0.12
LINC00473-202ENST00000455853 LACRTQ9GZZ8 138 aa14.28□□□□□ -0.12
LINC00473-202ENST00000455853 DCP1AQ9NPI6 582 aaPredicted RBP14.28□□□□□ -0.12
LINC00473-202ENST00000455853 AGPAT5Q9NUQ2 364 aa14.28□□□□□ -0.12
LINC00473-202ENST00000455853 RTCBQ9Y3I0 505 aaKnown RBP14.28□□□□□ -0.12
LINC00473-202ENST00000455853 AGPSO00116 658 aa14.27□□□□□ -0.12
LINC00473-202ENST00000455853 RGL2O15211 777 aa14.27□□□□□ -0.12
LINC00473-202ENST00000455853 HSF2BPO75031 334 aa14.27□□□□□ -0.12
LINC00473-202ENST00000455853 SRGAP2O75044 1071 aa14.27□□□□□ -0.12
LINC00473-202ENST00000455853 CAMTA2O94983 1202 aa14.27□□□□□ -0.12
LINC00473-202ENST00000455853 CRKLP46109 303 aaKnown RBP14.27□□□□□ -0.12
LINC00473-202ENST00000455853 CCDC181Q5TID7 509 aa14.27□□□□□ -0.12
LINC00473-202ENST00000455853 NLGN2Q8NFZ4 835 aa14.27□□□□□ -0.12
LINC00473-202ENST00000455853 NSUN4Q96CB9 384 aaKnown RBP14.27□□□□□ -0.12
LINC00473-202ENST00000455853 IFIH1Q9BYX4 1025 aaKnown RBP14.27□□□□□ -0.12
LINC00473-202ENST00000455853 TRIM9Q9C026 710 aa14.27□□□□□ -0.12
LINC00473-202ENST00000455853 YY1AP1Q9H869 796 aa14.27□□□□□ -0.12
LINC00473-202ENST00000455853 PCDHA6Q9UN73 950 aa14.27□□□□□ -0.12
LINC00473-202ENST00000455853 PCDHA8Q9Y5H6 950 aa14.27□□□□□ -0.12
LINC00473-202ENST00000455853 PCDHA13Q9Y5I0 950 aa14.27□□□□□ -0.12
LINC00473-202ENST00000455853 CNTNAP4Q9C0A0 1308 aa14.27□□□□□ -0.12
LINC00473-202ENST00000455853 CYP2D7A0A087X1C5 515 aa14.27□□□□□ -0.13
LINC00473-202ENST00000455853 PVALEFA0A1B0GWK0 134 aa14.27□□□□□ -0.13
LINC00473-202ENST00000455853 RASSF10A6NK89 507 aa14.27□□□□□ -0.13
LINC00473-202ENST00000455853 VGLL3A8MV65 326 aa14.27□□□□□ -0.13
LINC00473-202ENST00000455853 RPS6KA4O75676 772 aa14.27□□□□□ -0.13
LINC00473-202ENST00000455853 OR52Z1P0C646 297 aa14.27□□□□□ -0.13
LINC00473-202ENST00000455853 IRAK1P51617 712 aa14.27□□□□□ -0.13
LINC00473-202ENST00000455853 SF3B3Q15393 1217 aaKnown RBP14.27□□□□□ -0.13
LINC00473-202ENST00000455853 MAN2A1Q16706 1144 aa14.27□□□□□ -0.13
LINC00473-202ENST00000455853 MIIPQ5JXC2 388 aa14.27□□□□□ -0.13
LINC00473-202ENST00000455853 TRAPPC3LQ5T215 181 aa14.27□□□□□ -0.13
LINC00473-202ENST00000455853 FOXR1Q6PIV2 292 aa14.27□□□□□ -0.13
LINC00473-202ENST00000455853 SUGP1Q8IWZ8 645 aaKnown RBP14.27□□□□□ -0.13
LINC00473-202ENST00000455853 C1orf131Q8NDD1 294 aaKnown RBP14.27□□□□□ -0.13
LINC00473-202ENST00000455853 ARHGEF1Q92888 912 aaKnown RBP14.27□□□□□ -0.13
LINC00473-202ENST00000455853 BARHL2Q9NY43 387 aa14.27□□□□□ -0.13
LINC00473-202ENST00000455853 STIM2Q9P246 746 aa14.27□□□□□ -0.13
LINC00473-202ENST00000455853 LRWD1Q9UFC0 647 aa14.27□□□□□ -0.13
LINC00473-202ENST00000455853 FAM205AQ6ZU69 1335 aa14.27□□□□□ -0.13
LINC00473-202ENST00000455853 ROBO3Q96MS0 1386 aa14.27□□□□□ -0.13
LINC00473-202ENST00000455853 BAZ2BQ9UIF8 2168 aaKnown RBP14.26□□□□□ -0.13
LINC00473-202ENST00000455853 COL24A1Q17RW2 1714 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 UBR3Q6ZT12 1888 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 SSU72P8A0A1W2PR75 194 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 RCCD1A6NED2 376 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 PDE2AO00408 941 aaPredicted RBP14.26□□□□□ -0.13
LINC00473-202ENST00000455853 EIF3HO15372 352 aaKnown RBP eCLIP14.26□□□□□ -0.13
LINC00473-202ENST00000455853 USP8P40818 1118 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 GYG1P46976 350 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 ASIC1P78348 528 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 C2orf54Q08AI8 447 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 SPTY2D1Q68D10 685 aaPredicted RBP14.26□□□□□ -0.13
LINC00473-202ENST00000455853 ANKRD40Q6AI12 368 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 CENPPQ6IPU0 288 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 RCSD1Q6JBY9 416 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 B4GALNT4Q76KP1 1039 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 SND1Q7KZF4 910 aaKnown RBP eCLIP14.26□□□□□ -0.13
LINC00473-202ENST00000455853 FBXO33Q7Z6M2 555 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 PNMA1Q8ND90 353 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 SPATA4Q8NEY3 305 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.26□□□□□ -0.134e-8■■■■■ 36.3
LINC00473-202ENST00000455853 CALML4Q96GE6 196 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 OSBPL9Q96SU4 736 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 DEF6Q9H4E7 631 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 RNF216Q9NWF9 866 aaPredicted RBP14.26□□□□□ -0.13
LINC00473-202ENST00000455853 STK17AQ9UEE5 414 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 FLT1P17948 1338 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 MYH10P35580 1976 aa14.26□□□□□ -0.13
LINC00473-202ENST00000455853 MACROD2A1Z1Q3 448 aa14.25□□□□□ -0.13
LINC00473-202ENST00000455853 DCAF8L1A6NGE4 600 aa14.25□□□□□ -0.13
LINC00473-202ENST00000455853 SRRM3A6NNA2 597 aaPredicted RBP14.25□□□□□ -0.13
LINC00473-202ENST00000455853 PLCG1P19174 1290 aa14.25□□□□□ -0.13
LINC00473-202ENST00000455853 KIF11P52732 1056 aa14.25□□□□□ -0.13
LINC00473-202ENST00000455853 LRRC63Q05C16 580 aa14.25□□□□□ -0.13
LINC00473-202ENST00000455853 MAPK8IP2Q13387 824 aaPredicted RBP14.25□□□□□ -0.13
LINC00473-202ENST00000455853 VWA3BQ502W6 1294 aa14.25□□□□□ -0.13
LINC00473-202ENST00000455853 INTS5Q6P9B9 1019 aaKnown RBP14.25□□□□□ -0.13
LINC00473-202ENST00000455853 CLEC4GQ6UXB4 293 aa14.25□□□□□ -0.13
LINC00473-202ENST00000455853 IFT20Q8IY31 132 aa14.25□□□□□ -0.13
LINC00473-202ENST00000455853 NIP7Q9Y221 180 aaKnown RBP eCLIP14.25□□□□□ -0.13
LINC00473-202ENST00000455853 GRID2IPA4D2P6 1211 aa14.25□□□□□ -0.13
LINC00473-202ENST00000455853 ZEB2O60315 1214 aa14.25□□□□□ -0.13
LINC00473-202ENST00000455853 SMARCA1P28370 1054 aa14.25□□□□□ -0.13
LINC00473-202ENST00000455853 PSMD2Q13200 908 aa14.25□□□□□ -0.13
LINC00473-202ENST00000455853 NONOQ15233 471 aaKnown RBP eCLIP14.25□□□□□ -0.13
LINC00473-202ENST00000455853 SYN2Q92777 582 aaPredicted RBP14.25□□□□□ -0.13
LINC00473-202ENST00000455853 FAM84BQ96KN1 310 aaPredicted RBP14.25□□□□□ -0.13
LINC00473-202ENST00000455853 TMEM60Q9H2L4 133 aa14.25□□□□□ -0.13
LINC00473-202ENST00000455853 SIK3Q9Y2K2 1263 aa14.25□□□□□ -0.13
LINC00473-202ENST00000455853 ATAD5Q96QE3 1844 aa14.24□□□□□ -0.13
LINC00473-202ENST00000455853 ZNF831Q5JPB2 1677 aa14.24□□□□□ -0.13
LINC00473-202ENST00000455853 hCG_1984214I3L0E3 225 aa14.24□□□□□ -0.13
LINC00473-202ENST00000455853 STXBP3O00186 592 aa14.24□□□□□ -0.13
LINC00473-202ENST00000455853 AKR1B10O60218 316 aa14.24□□□□□ -0.13
LINC00473-202ENST00000455853 MYBL2P10244 700 aa14.24□□□□□ -0.13
LINC00473-202ENST00000455853 GNA11P29992 359 aa14.24□□□□□ -0.13
LINC00473-202ENST00000455853 PAK2Q13177 524 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms