RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 GULP1Q9UBP9 304 aa4.13□□□□□ -1.75
LINC02540-201ENST00000455554 ZNRF3Q9ULT6 936 aa4.13□□□□□ -1.75
LINC02540-201ENST00000455554 DIS3Q9Y2L1 958 aaKnown RBP4.13□□□□□ -1.75
LINC02540-201ENST00000455554 STXBP3O00186 592 aa4.12□□□□□ -1.75
LINC02540-201ENST00000455554 AURKAO14965 403 aa4.12□□□□□ -1.75
LINC02540-201ENST00000455554 LAMTOR5O43504 91 aa4.12□□□□□ -1.75
LINC02540-201ENST00000455554 IMPDH2P12268 514 aa4.12□□□□□ -1.75
LINC02540-201ENST00000455554 PPP2R5DQ14738 602 aa4.12□□□□□ -1.75
LINC02540-201ENST00000455554 ICAM4Q14773 271 aa4.12□□□□□ -1.75
LINC02540-201ENST00000455554 TCEAL1Q15170 157 aa4.12□□□□□ -1.75
LINC02540-201ENST00000455554 ETV3LQ6ZN32 361 aa4.12□□□□□ -1.75
LINC02540-201ENST00000455554 TTLL6Q8N841 843 aa4.12□□□□□ -1.75
LINC02540-201ENST00000455554 TXNDC5Q8NBS9 432 aaKnown RBP4.12□□□□□ -1.75
LINC02540-201ENST00000455554 USP33Q8TEY7 942 aa4.12□□□□□ -1.75
LINC02540-201ENST00000455554 LCORQ96JN0 433 aaPredicted RBP4.12□□□□□ -1.75
LINC02540-201ENST00000455554 TM9SF2Q99805 663 aa4.12□□□□□ -1.75
LINC02540-201ENST00000455554 KLC2Q9H0B6 622 aa4.12□□□□□ -1.75
LINC02540-201ENST00000455554 ING1Q9UK53 422 aaPredicted RBP4.12□□□□□ -1.75
LINC02540-201ENST00000455554 SIT1Q9Y3P8 196 aa4.12□□□□□ -1.75
LINC02540-201ENST00000455554 SEPHS1P49903 392 aa4.11□□□□□ -1.75
LINC02540-201ENST00000455554 RBM10P98175 930 aaKnown RBP4.11□□□□□ -1.75
LINC02540-201ENST00000455554 PLEKHH3Q7Z736 793 aa4.11□□□□□ -1.75
LINC02540-201ENST00000455554 STK32CQ86UX6 486 aa4.11□□□□□ -1.75
LINC02540-201ENST00000455554 CPNE8Q86YQ8 564 aa4.11□□□□□ -1.75
LINC02540-201ENST00000455554 RNF34Q969K3 372 aa4.11□□□□□ -1.75
LINC02540-201ENST00000455554 PCED1AQ9H1Q7 454 aa4.11□□□□□ -1.75
LINC02540-201ENST00000455554 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.11□□□□□ -1.75
LINC02540-201ENST00000455554 PPP4R1LQ9P1A2 415 aa4.11□□□□□ -1.75
LINC02540-201ENST00000455554 C9orf118A6NHY6 69 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 DDX3XO00571 662 aaKnown RBP eCLIP4.1□□□□□ -1.75
LINC02540-201ENST00000455554 CBFA2T2O43439 604 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 B4GALT3O60512 393 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 NTRK1P04629 796 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 KLF10Q13118 480 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 ZYXQ15942 572 aaKnown RBP4.1□□□□□ -1.75
LINC02540-201ENST00000455554 PRR31Q5SQ13 230 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 CD300LDQ6UXZ3 194 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 UNC5AQ6ZN44 842 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 ZC3H18Q86VM9 953 aaKnown RBP4.1□□□□□ -1.75
LINC02540-201ENST00000455554 DCP2Q8IU60 420 aaKnown RBP4.1□□□□□ -1.75
LINC02540-201ENST00000455554 KIAA0825Q8IV33 1275 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 FAM26EQ8N5C1 309 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 ADCY4Q8NFM4 1077 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 FERD3LQ96RJ6 166 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 SPON2Q9BUD6 331 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 TRAIPQ9BWF2 469 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 CD248Q9HCU0 757 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 WHRNQ9P202 907 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 ZNF214Q9UL59 606 aaPredicted RBP4.1□□□□□ -1.75
LINC02540-201ENST00000455554 TIMELESSQ9UNS1 1208 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 BACE2Q9Y5Z0 518 aa4.1□□□□□ -1.75
LINC02540-201ENST00000455554 TRBV23OR9-2A0A075B6M9 112 aa4.09□□□□□ -1.75
LINC02540-201ENST00000455554 NPHP3-ACAD11A0A0J9YXS1 232 aa4.09□□□□□ -1.75
LINC02540-201ENST00000455554 NPEPPSL1A6NEC2 478 aa4.09□□□□□ -1.75
LINC02540-201ENST00000455554 C2orf71A6NGG8 1288 aa4.09□□□□□ -1.75
LINC02540-201ENST00000455554 NPHS1O60500 1241 aa4.09□□□□□ -1.75
LINC02540-201ENST00000455554 AMHP03971 560 aa4.09□□□□□ -1.75
LINC02540-201ENST00000455554 FUCA1P04066 466 aa4.09□□□□□ -1.75
LINC02540-201ENST00000455554 PAMP19021 973 aa4.09□□□□□ -1.75
LINC02540-201ENST00000455554 TGM1P22735 817 aa4.09□□□□□ -1.75
LINC02540-201ENST00000455554 GUCY2CP25092 1073 aa4.09□□□□□ -1.75
LINC02540-201ENST00000455554 ITGA1P56199 1179 aa4.09□□□□□ -1.75
LINC02540-201ENST00000455554 DPY19L1Q2PZI1 675 aa4.09□□□□□ -1.75
LINC02540-201ENST00000455554 CIR1Q86X95 450 aaPredicted RBP4.09□□□□□ -1.75
LINC02540-201ENST00000455554 MIB1Q86YT6 1006 aa4.09□□□□□ -1.75
LINC02540-201ENST00000455554 DNERQ8NFT8 737 aa4.09□□□□□ -1.75
LINC02540-201ENST00000455554 AP5M1Q9H0R1 490 aa4.09□□□□□ -1.75
LINC02540-201ENST00000455554 C7orf72A4D263 438 aa4.08□□□□□ -1.76
LINC02540-201ENST00000455554 GPR42O15529 346 aa4.08□□□□□ -1.76
LINC02540-201ENST00000455554 VAMP4O75379 141 aa4.08□□□□□ -1.76
LINC02540-201ENST00000455554 ZNF585AQ6P3V2 769 aa4.08□□□□□ -1.76
LINC02540-201ENST00000455554 ERICH6Q7L0X2 663 aa4.08□□□□□ -1.76
LINC02540-201ENST00000455554 PALM2Q8IXS6 379 aa4.08□□□□□ -1.76
LINC02540-201ENST00000455554 HAUS7Q99871 368 aa4.08□□□□□ -1.76
LINC02540-201ENST00000455554 GBP3Q9H0R5 595 aa4.08□□□□□ -1.76
LINC02540-201ENST00000455554 DEF6Q9H4E7 631 aa4.08□□□□□ -1.76
LINC02540-201ENST00000455554 HS3ST3A1Q9Y663 406 aa4.08□□□□□ -1.76
LINC02540-201ENST00000455554 CYP1A1P04798 512 aaPredicted RBP4.07□□□□□ -1.76
LINC02540-201ENST00000455554 ZNF28P17035 718 aa4.07□□□□□ -1.76
LINC02540-201ENST00000455554 SELENOPP49908 381 aa4.07□□□□□ -1.76
LINC02540-201ENST00000455554 AMPD2Q01433 879 aa4.07□□□□□ -1.76
LINC02540-201ENST00000455554 PRAMEF18Q5VWM3 479 aa4.07□□□□□ -1.76
LINC02540-201ENST00000455554 FBXW10Q5XX13 1052 aa4.07□□□□□ -1.76
LINC02540-201ENST00000455554 RUFY4Q6ZNE9 571 aa4.07□□□□□ -1.76
LINC02540-201ENST00000455554 RBBP8NLQ8NC74 664 aaPredicted RBP4.07□□□□□ -1.76
LINC02540-201ENST00000455554 PLEKHO2Q8TD55 490 aa4.07□□□□□ -1.76
LINC02540-201ENST00000455554 WWC2-AS2Q96NR7 200 aa4.07□□□□□ -1.76
LINC02540-201ENST00000455554 PTPN18Q99952 460 aa4.07□□□□□ -1.76
LINC02540-201ENST00000455554 KLHL25Q9H0H3 589 aa4.07□□□□□ -1.76
LINC02540-201ENST00000455554 TCAF1Q9Y4C2 921 aa4.07□□□□□ -1.76
LINC02540-201ENST00000455554 SGSM2O43147 1006 aa4.06□□□□□ -1.76
LINC02540-201ENST00000455554 PPM1BO75688 479 aa4.06□□□□□ -1.76
LINC02540-201ENST00000455554 EPHB4P54760 987 aa4.06□□□□□ -1.76
LINC02540-201ENST00000455554 GRB10Q13322 594 aa4.06□□□□□ -1.76
LINC02540-201ENST00000455554 HEATR6Q6AI08 1181 aaKnown RBP4.06□□□□□ -1.76
LINC02540-201ENST00000455554 ADAT2Q7Z6V5 191 aaKnown RBP4.06□□□□□ -1.76
LINC02540-201ENST00000455554 FAM126BQ8IXS8 530 aa4.06□□□□□ -1.76
LINC02540-201ENST00000455554 IGDCC4Q8TDY8 1250 aa4.06□□□□□ -1.76
LINC02540-201ENST00000455554 SEC14L1Q92503 715 aa4.06□□□□□ -1.76
LINC02540-201ENST00000455554 NGRNQ9NPE2 291 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms