RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 TOMM22Q9NS69 142 aa9.44□□□□□ -0.9
NIF3L1-209ENST00000454952 CXXC1Q9P0U4 656 aaPredicted RBP9.44□□□□□ -0.9
NIF3L1-209ENST00000454952 GRIN2DO15399 1336 aa9.44□□□□□ -0.9
NIF3L1-209ENST00000454952 TNKSO95271 1327 aa9.44□□□□□ -0.9
NIF3L1-209ENST00000454952 ZMYM6O95789 1325 aa9.44□□□□□ -0.9
NIF3L1-209ENST00000454952 WDR19Q8NEZ3 1342 aa9.44□□□□□ -0.9
NIF3L1-209ENST00000454952 SCN10AQ9Y5Y9 1956 aa9.44□□□□□ -0.9
NIF3L1-209ENST00000454952 ZBBXA8MT70 800 aa9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 NMT2O60551 498 aa9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 MFAP1P55081 439 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 PSMC6P62333 389 aa9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 PURAQ00577 322 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 BFSP2Q13515 415 aa9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 BAATQ14032 418 aaPredicted RBP9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 PPP2R5BQ15173 497 aa9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 MCMDC2Q4G0Z9 681 aa9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 CCDC178Q5BJE1 867 aa9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 TMEM67Q5HYA8 995 aa9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 RNF207Q6ZRF8 634 aa9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 CCDC155Q8N6L0 562 aa9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 OR6J1Q8NGC5 347 aa9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 PHOSPHO2Q8TCD6 241 aa9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 SLC9A7Q96T83 725 aa9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 WNT8AQ9H1J5 351 aa9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 RNF41Q9H4P4 317 aaPredicted RBP9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 MTMR7Q9Y216 660 aa9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 CDH23Q9H251 3354 aa9.43□□□□□ -0.9
NIF3L1-209ENST00000454952 UMODL1Q5DID0 1318 aa9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 PRUNE2Q8WUY3 3088 aa9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 KIF28PB7ZC32 967 aa9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 PARNO95453 639 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 MYL3P08590 195 aa9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 CALML3P27482 149 aa9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 SNAP25P60880 206 aa9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 TTLL4Q14679 1199 aa9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 FAM47CQ5HY64 1035 aa9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 RRP12Q5JTH9 1297 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 GPATCH4Q5T3I0 446 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 RGS22Q8NE09 1264 aa9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 ADAMTS19Q8TE59 1207 aa9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 CHMP4CQ96CF2 233 aa9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 TMEM47Q9BQJ4 181 aa9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 NOD1Q9Y239 953 aa9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 YBX2Q9Y2T7 364 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 TANC1Q9C0D5 1861 aa9.42□□□□□ -0.9
NIF3L1-209ENST00000454952 MYH6P13533 1939 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 FRMPD2Q68DX3 1309 aaPredicted RBP9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 A6NJR5 290 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 NFIBO00712 420 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 FOXP2O15409 715 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 BAIAP3O94812 1187 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 FGAP02671 866 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 PDHBP11177 359 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 POU3F3P20264 500 aaPredicted RBP9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 EDNRBP24530 442 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 TIE1P35590 1138 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 SLC16A2P36021 539 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 ZNF543Q08ER8 600 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 ADGRE1Q14246 886 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 CCDC85BQ15834 202 aaPredicted RBP9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 ANKRD45Q5TZF3 282 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 TTBK2Q6IQ55 1244 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 MFSD6Q6ZSS7 791 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 OTUD7AQ8TE49 926 aaPredicted RBP9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 CLEC4DQ8WXI8 215 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 ESR2Q92731 530 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 UHRF1Q96T88 793 aaPredicted RBP9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 GPCPD1Q9NPB8 672 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 TRMT13Q9NUP7 481 aaKnown RBP9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 PCDHB15Q9Y5E8 787 aa9.41□□□□□ -0.9
NIF3L1-209ENST00000454952 EYSQ5T1H1 3165 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 SALL3Q9BXA9 1300 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 SCN5AQ14524 2016 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 TXNP10599 105 aaKnown RBP9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 HSPD1P10809 573 aaKnown RBP9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 CYP2C9P11712 490 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 RABGGTBP53611 331 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 PDE1AP54750 535 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 RPS6P62753 249 aaKnown RBP9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 NBPF20Q3BBV1 942 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 TPRNQ4KMQ1 711 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 VPS53Q5VIR6 699 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 SLC30A10Q6XR72 485 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 DEFB128Q7Z7B8 93 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 IQCA1Q86XH1 822 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 DGKHQ86XP1 1220 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 MCF2L2Q86YR7 1114 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 CAGE1Q8TC20 777 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 AFAP1L1Q8TED9 768 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 SCLYQ96I15 445 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 FTOQ9C0B1 505 aaKnown RBP eCLIP9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 INCENPQ9NQS7 918 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 COG5Q9UP83 839 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 TRIP12Q14669 1992 aaPredicted RBP9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 VCANP13611 3396 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 KIAA1217Q5T5P2 1943 aa9.4□□□□□ -0.9
NIF3L1-209ENST00000454952 PRRC2BQ5JSZ5 2229 aaKnown RBP9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 ABCB11O95342 1321 aa9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 CCDC171Q6TFL3 1326 aa9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 TTLL13PA6NNM8 815 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms