RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 SLC30A10Q6XR72 485 aa11.72□□□□□ -0.53
CLCN4-204ENST00000454850 MORC4Q8TE76 937 aa11.72□□□□□ -0.53
CLCN4-204ENST00000454850 UIMC1Q96RL1 719 aa11.72□□□□□ -0.53
CLCN4-204ENST00000454850 SEC62Q99442 399 aaKnown RBP11.72□□□□□ -0.53
CLCN4-204ENST00000454850 NACAP1Q9BZK3 213 aa11.72□□□□□ -0.53
CLCN4-204ENST00000454850 NAPBQ9H115 298 aa11.72□□□□□ -0.53
CLCN4-204ENST00000454850 PLA2G6O60733 806 aa11.71□□□□□ -0.53
CLCN4-204ENST00000454850 BAIAP3O94812 1187 aa11.71□□□□□ -0.53
CLCN4-204ENST00000454850 ZFYP08048 801 aaPredicted RBP11.71□□□□□ -0.53
CLCN4-204ENST00000454850 SSTR3P32745 418 aaPredicted RBP11.71□□□□□ -0.53
CLCN4-204ENST00000454850 WDR5P61964 334 aaKnown RBP11.71□□□□□ -0.53
CLCN4-204ENST00000454850 DEFB103AP81534 67 aa11.71□□□□□ -0.53
CLCN4-204ENST00000454850 CTDSPL2Q05D32 466 aa11.71□□□□□ -0.53
CLCN4-204ENST00000454850 PDE4DQ08499 809 aa11.71□□□□□ -0.53
CLCN4-204ENST00000454850 PTGISQ16647 500 aa11.71□□□□□ -0.53
CLCN4-204ENST00000454850 TTBK2Q6IQ55 1244 aa11.71□□□□□ -0.53
CLCN4-204ENST00000454850 FAM117BQ6P1L5 589 aa11.71□□□□□ -0.53
CLCN4-204ENST00000454850 NFRKBQ6P4R8 1299 aa11.71□□□□□ -0.53
CLCN4-204ENST00000454850 GPATCH3Q96I76 525 aa11.71□□□□□ -0.53
CLCN4-204ENST00000454850 UBE2ZQ9H832 354 aaPredicted RBP11.71□□□□□ -0.53
CLCN4-204ENST00000454850 INCENPQ9NQS7 918 aa11.71□□□□□ -0.53
CLCN4-204ENST00000454850 ATG2AQ2TAZ0 1938 aa11.7□□□□□ -0.54
CLCN4-204ENST00000454850 FRMPD2Q68DX3 1309 aaPredicted RBP11.7□□□□□ -0.54
CLCN4-204ENST00000454850 RBM47A0AV96 593 aaKnown RBP11.7□□□□□ -0.54
CLCN4-204ENST00000454850 PI4K2BG5E9Z4 385 aa11.7□□□□□ -0.54
CLCN4-204ENST00000454850 KCNA5P22460 613 aa11.7□□□□□ -0.54
CLCN4-204ENST00000454850 PPP4R3BQ5MIZ7 849 aa11.7□□□□□ -0.54
CLCN4-204ENST00000454850 SYDE2Q5VT97 1194 aa11.7□□□□□ -0.54
CLCN4-204ENST00000454850 CCDC155Q8N6L0 562 aa11.7□□□□□ -0.54
CLCN4-204ENST00000454850 CRBNQ96SW2 442 aa11.7□□□□□ -0.54
CLCN4-204ENST00000454850 RANBP17Q9H2T7 1088 aaKnown RBP11.7□□□□□ -0.54
CLCN4-204ENST00000454850 GPCPD1Q9NPB8 672 aa11.7□□□□□ -0.54
CLCN4-204ENST00000454850 IL17RBQ9NRM6 502 aa11.7□□□□□ -0.54
CLCN4-204ENST00000454850 ZNF318Q5VUA4 2279 aa11.7□□□□□ -0.54
CLCN4-204ENST00000454850 RANBP6O60518 1105 aaKnown RBP11.69□□□□□ -0.54
CLCN4-204ENST00000454850 TXNP10599 105 aaKnown RBP11.69□□□□□ -0.54
CLCN4-204ENST00000454850 PTPN11Q06124 597 aaPredicted RBP11.69□□□□□ -0.54
CLCN4-204ENST00000454850 TCTN1Q2MV58 587 aa11.69□□□□□ -0.54
CLCN4-204ENST00000454850 RNF207Q6ZRF8 634 aa11.69□□□□□ -0.54
CLCN4-204ENST00000454850 GJD3Q8N144 294 aa11.69□□□□□ -0.54
CLCN4-204ENST00000454850 SCFD2Q8WU76 684 aa11.69□□□□□ -0.54
CLCN4-204ENST00000454850 DCAF4Q8WV16 495 aa11.69□□□□□ -0.54
CLCN4-204ENST00000454850 TGS1Q96RS0 853 aaKnown RBP11.69□□□□□ -0.54
CLCN4-204ENST00000454850 LINC01553A4QN01 128 aa11.68□□□□□ -0.54
CLCN4-204ENST00000454850 A6NJR5 290 aa11.68□□□□□ -0.54
CLCN4-204ENST00000454850 PRR33A8MZF0 331 aa11.68□□□□□ -0.54
CLCN4-204ENST00000454850 NKRFO15226 690 aaKnown RBP eCLIP11.68□□□□□ -0.54
CLCN4-204ENST00000454850 KPNA6O60684 536 aa11.68□□□□□ -0.54
CLCN4-204ENST00000454850 ARIH2O95376 493 aa11.68□□□□□ -0.54
CLCN4-204ENST00000454850 IL9P15248 144 aa11.68□□□□□ -0.54
CLCN4-204ENST00000454850 SELPP16109 830 aa11.68□□□□□ -0.54
CLCN4-204ENST00000454850 CSPP1Q1MSJ5 1256 aa11.68□□□□□ -0.54
CLCN4-204ENST00000454850 LRRFIP1Q32MZ4 808 aaKnown RBP11.68□□□□□ -0.54
CLCN4-204ENST00000454850 GDF6Q6KF10 455 aaPredicted RBP11.68□□□□□ -0.54
CLCN4-204ENST00000454850 LRRC8DQ7L1W4 858 aa11.68□□□□□ -0.54
CLCN4-204ENST00000454850 CHST3Q7LGC8 479 aa11.68□□□□□ -0.54
CLCN4-204ENST00000454850 FAM178BQ8IXR5 827 aa11.68□□□□□ -0.54
CLCN4-204ENST00000454850 CAGE1Q8TC20 777 aa11.68□□□□□ -0.54
CLCN4-204ENST00000454850 AFAP1L1Q8TED9 768 aa11.68□□□□□ -0.54
CLCN4-204ENST00000454850 MPHOSPH6Q99547 160 aaKnown RBP11.68□□□□□ -0.54
CLCN4-204ENST00000454850 FSD1Q9BTV5 496 aa11.68□□□□□ -0.54
CLCN4-204ENST00000454850 SUGCTQ9HAC7 445 aa11.68□□□□□ -0.54
CLCN4-204ENST00000454850 TOMM22Q9NS69 142 aa11.68□□□□□ -0.54
CLCN4-204ENST00000454850 LMCD1Q9NZU5 365 aa11.68□□□□□ -0.54
CLCN4-204ENST00000454850 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.68□□□□□ -0.54
CLCN4-204ENST00000454850 LOC102724159A0A0B4J2E5 919 aa11.67□□□□□ -0.54
CLCN4-204ENST00000454850 GJB5O95377 273 aa11.67□□□□□ -0.54
CLCN4-204ENST00000454850 RPS6P62753 249 aaKnown RBP11.67□□□□□ -0.54
CLCN4-204ENST00000454850 GPNMBQ14956 572 aa11.67□□□□□ -0.54
CLCN4-204ENST00000454850 PWP2Q15269 919 aaKnown RBP11.67□□□□□ -0.54
CLCN4-204ENST00000454850 PTCRAQ6ISU1 281 aaPredicted RBP11.67□□□□□ -0.54
CLCN4-204ENST00000454850 CNKSR3Q6P9H4 555 aa11.67□□□□□ -0.54
CLCN4-204ENST00000454850 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.67□□□□□ -0.54
CLCN4-204ENST00000454850 AFG1LQ8WV93 481 aa11.67□□□□□ -0.54
CLCN4-204ENST00000454850 CLEC4DQ8WXI8 215 aa11.67□□□□□ -0.54
CLCN4-204ENST00000454850 DHX38Q92620 1227 aaKnown RBP11.67□□□□□ -0.54
CLCN4-204ENST00000454850 CTAGE1Q96RT6 745 aa11.67□□□□□ -0.54
CLCN4-204ENST00000454850 RAD9AQ99638 391 aa11.67□□□□□ -0.54
CLCN4-204ENST00000454850 CHMP4BQ9H444 224 aaKnown RBP11.67□□□□□ -0.54
CLCN4-204ENST00000454850 RALGAPA2Q2PPJ7 1873 aa11.66□□□□□ -0.54
CLCN4-204ENST00000454850 NBNO60934 754 aa11.66□□□□□ -0.54
CLCN4-204ENST00000454850 MMP3P08254 477 aa11.66□□□□□ -0.54
CLCN4-204ENST00000454850 EDNRBP24530 442 aa11.66□□□□□ -0.54
CLCN4-204ENST00000454850 MRE11P49959 708 aa11.66□□□□□ -0.54
CLCN4-204ENST00000454850 ERVK-21P61565 698 aa11.66□□□□□ -0.54
CLCN4-204ENST00000454850 LEXMQ3ZCV2 418 aa11.66□□□□□ -0.54
CLCN4-204ENST00000454850 USH1GQ495M9 461 aa11.66□□□□□ -0.54
CLCN4-204ENST00000454850 RRP12Q5JTH9 1297 aaKnown RBP11.66□□□□□ -0.54
CLCN4-204ENST00000454850 EP400NLQ6ZTU2 488 aa11.66□□□□□ -0.54
CLCN4-204ENST00000454850 FBXO22Q8NEZ5 403 aa11.66□□□□□ -0.54
CLCN4-204ENST00000454850 C17orf80Q9BSJ5 609 aa11.66□□□□□ -0.54
CLCN4-204ENST00000454850 ALG1Q9BT22 464 aa11.66□□□□□ -0.54
CLCN4-204ENST00000454850 KAT6AQ92794 2004 aa11.65□□□□□ -0.54
CLCN4-204ENST00000454850 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.65□□□□□ -0.54
CLCN4-204ENST00000454850 ABHD14A-ACY1A0A1B0GW23 586 aa11.65□□□□□ -0.54
CLCN4-204ENST00000454850 B4DLN1 442 aa11.65□□□□□ -0.54
CLCN4-204ENST00000454850 H3BQ06 376 aaPredicted RBP11.65□□□□□ -0.54
CLCN4-204ENST00000454850 FOXP2O15409 715 aa11.65□□□□□ -0.54
CLCN4-204ENST00000454850 CKBP12277 381 aa11.65□□□□□ -0.54
CLCN4-204ENST00000454850 MRPL12P52815 198 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms