RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 CCDC181Q5TID7 509 aa13.33□□□□□ -0.28
SMPD4-213ENST00000454468 POTEBQ6S5H4 581 aa13.33□□□□□ -0.28
SMPD4-213ENST00000454468 FAM114A1Q8IWE2 563 aa13.33□□□□□ -0.28
SMPD4-213ENST00000454468 MB21D1Q8N884 522 aa13.33□□□□□ -0.28
SMPD4-213ENST00000454468 GLIS3Q8NEA6 775 aa13.33□□□□□ -0.28
SMPD4-213ENST00000454468 ZMYND12Q9H0C1 365 aa13.33□□□□□ -0.28
SMPD4-213ENST00000454468 JMJD4Q9H9V9 463 aa13.33□□□□□ -0.28
SMPD4-213ENST00000454468 ZCCHC17Q9NP64 241 aaKnown RBP13.33□□□□□ -0.28
SMPD4-213ENST00000454468 CYLC1P35663 651 aaPredicted RBP13.33□□□□□ -0.28
SMPD4-213ENST00000454468 GYS2P54840 703 aa13.33□□□□□ -0.28
SMPD4-213ENST00000454468 ASPRV1Q53RT3 343 aa13.33□□□□□ -0.28
SMPD4-213ENST00000454468 NAALADL2Q58DX5 795 aa13.33□□□□□ -0.28
SMPD4-213ENST00000454468 ADSSL1Q8N142 457 aa13.33□□□□□ -0.28
SMPD4-213ENST00000454468 OGFOD1Q8N543 542 aa13.33□□□□□ -0.28
SMPD4-213ENST00000454468 NAPGQ99747 312 aaPredicted RBP13.33□□□□□ -0.28
SMPD4-213ENST00000454468 ZBTB12Q9Y330 459 aaPredicted RBP13.33□□□□□ -0.28
SMPD4-213ENST00000454468 ATP6V0A2Q9Y487 856 aa13.33□□□□□ -0.28
SMPD4-213ENST00000454468 MYH3P11055 1940 aa13.33□□□□□ -0.28
SMPD4-213ENST00000454468 BCL9LQ86UU0 1499 aa13.33□□□□□ -0.28
SMPD4-213ENST00000454468 DDTLA6NHG4 134 aaPredicted RBP13.32□□□□□ -0.28
SMPD4-213ENST00000454468 MYMKA6NI61 221 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 NPR1P16066 1061 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 CXCR5P32302 372 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 CDC37Q16543 378 aaPredicted RBP13.32□□□□□ -0.28
SMPD4-213ENST00000454468 ABCB5Q2M3G0 1257 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 NT5DC1Q5TFE4 455 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 GALNT17Q6IS24 598 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 TRIM65Q6PJ69 517 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 SP8Q8IXZ3 490 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 LARGE2Q8N3Y3 721 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 JAKMIP2Q96AA8 810 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.32□□□□□ -0.28
SMPD4-213ENST00000454468 FGRP09769 529 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 ADRA2BP18089 450 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 SP4Q02446 784 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 KIF5AQ12840 1032 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 RAPGEF1Q13905 1077 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 RDH13Q8NBN7 331 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 SPZ1Q9BXG8 430 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 PNMA6FA0A0J9YX94 578 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 ECE2O60344 883 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 ERVK-24P63145 666 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 PANK4Q9NVE7 773 aa13.32□□□□□ -0.28
SMPD4-213ENST00000454468 POTEFA5A3E0 1075 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 BUB1O43683 1085 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 POTEIP0CG38 1075 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 POTEGQ6S5H5 508 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 POTEEQ6S8J3 1075 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 SH3RF1Q7Z6J0 888 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 TPH2Q8IWU9 490 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 NEK11Q8NG66 645 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 PANX2Q96RD6 677 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 PHLPP2Q6ZVD8 1323 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 NDUFA10O95299 355 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 CCNE1P24864 410 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 DNM2P50570 870 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 HSP90B2PQ58FF3 399 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 PARD6BQ9BYG5 372 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.31□□□□□ -0.284e-6■■□□□ 13.5
SMPD4-213ENST00000454468 MKRN1Q9UHC7 482 aaKnown RBP13.31□□□□□ -0.28
SMPD4-213ENST00000454468 KRT86O43790 486 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 SORBS3O60504 671 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 ZNF543Q08ER8 600 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 SH2D3AQ9BRG2 576 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 MYH7P12883 1935 aa13.31□□□□□ -0.28
SMPD4-213ENST00000454468 F5H6K3 240 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 SRGNP10124 158 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 IL1R1P14778 569 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 KLRC3Q07444 240 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 FAM26FQ5R3K3 315 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 TMED8Q6PL24 325 aaPredicted RBP13.3□□□□□ -0.28
SMPD4-213ENST00000454468 PIGOQ8TEQ8 1089 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 DUSP10Q9Y6W6 482 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 ZBTB5O15062 677 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 PLEKP08567 350 aaPredicted RBP13.3□□□□□ -0.28
SMPD4-213ENST00000454468 NOP2P46087 812 aaKnown RBP13.3□□□□□ -0.28
SMPD4-213ENST00000454468 CDKAL1Q5VV42 579 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 KCNK18Q7Z418 384 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 RGS22Q8NE09 1264 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 MASTLQ96GX5 879 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 SPAG5Q96R06 1193 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 CRAMP1Q96RY5 1269 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 PCDHB13Q9Y5F0 798 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 FBXO11Q86XK2 927 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 MYOCDQ8IZQ8 938 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 C4orf32Q8N8J7 132 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 BCS1LQ9Y276 419 aa13.3□□□□□ -0.28
SMPD4-213ENST00000454468 PHLPP1O60346 1717 aa13.29□□□□□ -0.28
SMPD4-213ENST00000454468 EFCAB8A8MWE9 144 aa13.29□□□□□ -0.28
SMPD4-213ENST00000454468 CLIC2O15247 247 aa13.29□□□□□ -0.28
SMPD4-213ENST00000454468 USO1O60763 962 aaKnown RBP13.29□□□□□ -0.28
SMPD4-213ENST00000454468 TBCAO75347 108 aaKnown RBP13.29□□□□□ -0.28
SMPD4-213ENST00000454468 TMEM139Q8IV31 216 aa13.29□□□□□ -0.28
SMPD4-213ENST00000454468 AK8Q96MA6 479 aa13.29□□□□□ -0.28
SMPD4-213ENST00000454468 NAA15Q9BXJ9 866 aaKnown RBP13.29□□□□□ -0.28
SMPD4-213ENST00000454468 CCSER1Q9C0I3 900 aa13.29□□□□□ -0.28
SMPD4-213ENST00000454468 PI4KBQ9UBF8 816 aa13.29□□□□□ -0.28
SMPD4-213ENST00000454468 LGALS16A8MUM7 142 aa13.29□□□□□ -0.28
SMPD4-213ENST00000454468 FGFR1OPO95684 399 aaKnown RBP13.29□□□□□ -0.28
SMPD4-213ENST00000454468 APBA1Q02410 837 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms