RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 KIF2BQ8N4N8 673 aa20.56■□□□□ 0.88
PTPA-223ENST00000452489 FAM81AQ8TBF8 368 aa20.56■□□□□ 0.88
PTPA-223ENST00000452489 XPO6Q96QU8 1125 aaKnown RBP20.56■□□□□ 0.88
PTPA-223ENST00000452489 ESF1Q9H501 851 aaKnown RBP20.56■□□□□ 0.88
PTPA-223ENST00000452489 CABP5Q9NP86 173 aa20.56■□□□□ 0.88
PTPA-223ENST00000452489 AATFQ9NY61 560 aaKnown RBP eCLIP20.56■□□□□ 0.88
PTPA-223ENST00000452489 METP08581 1390 aa20.56■□□□□ 0.88
PTPA-223ENST00000452489 IGF2BP3O00425 579 aaKnown RBP eCLIP20.55■□□□□ 0.88
PTPA-223ENST00000452489 ZNF213O14771 459 aa20.55■□□□□ 0.88
PTPA-223ENST00000452489 ZBTB43O43298 467 aa20.55■□□□□ 0.88
PTPA-223ENST00000452489 PIP4K2AP48426 406 aaPredicted RBP20.55■□□□□ 0.88
PTPA-223ENST00000452489 CEBPAP49715 358 aaPredicted RBP20.55■□□□□ 0.88
PTPA-223ENST00000452489 PMS1P54277 932 aaKnown RBP20.55■□□□□ 0.88
PTPA-223ENST00000452489 TYW1BQ6NUM6 668 aa20.55■□□□□ 0.88
PTPA-223ENST00000452489 DDX60Q8IY21 1712 aaKnown RBP20.55■□□□□ 0.88
PTPA-223ENST00000452489 PDS5AQ29RF7 1337 aaKnown RBP20.55■□□□□ 0.88
PTPA-223ENST00000452489 NEURL1BA8MQ27 555 aa20.55■□□□□ 0.88
PTPA-223ENST00000452489 BUB1O43683 1085 aa20.55■□□□□ 0.88
PTPA-223ENST00000452489 ECHS1P30084 290 aa20.55■□□□□ 0.88
PTPA-223ENST00000452489 PRCPP42785 496 aa20.55■□□□□ 0.88
PTPA-223ENST00000452489 NCALDP61601 193 aa20.55■□□□□ 0.88
PTPA-223ENST00000452489 SSRP1Q08945 709 aaKnown RBP20.55■□□□□ 0.88
PTPA-223ENST00000452489 GCKRQ14397 625 aa20.55■□□□□ 0.88
PTPA-223ENST00000452489 TRPM8Q7Z2W7 1104 aa20.55■□□□□ 0.88
PTPA-223ENST00000452489 RIC3Q7Z5B4 369 aa20.55■□□□□ 0.88
PTPA-223ENST00000452489 HOMEZQ8IX15 550 aa20.55■□□□□ 0.88
PTPA-223ENST00000452489 CNBD1Q8NA66 436 aa20.55■□□□□ 0.88
PTPA-223ENST00000452489 STK38LQ9Y2H1 464 aa20.55■□□□□ 0.88
PTPA-223ENST00000452489 LRRD1A4D1F6 860 aa20.54■□□□□ 0.88
PTPA-223ENST00000452489 KRT16P08779 473 aa20.54■□□□□ 0.88
PTPA-223ENST00000452489 ERMARDQ5T6L9 678 aa20.54■□□□□ 0.88
PTPA-223ENST00000452489 KLHDC7AQ5VTJ3 777 aa20.54■□□□□ 0.88
PTPA-223ENST00000452489 RUFY4Q6ZNE9 571 aa20.54■□□□□ 0.88
PTPA-223ENST00000452489 DDX42Q86XP3 938 aaKnown RBP eCLIP20.54■□□□□ 0.88
PTPA-223ENST00000452489 CCDC82Q8N4S0 544 aa20.54■□□□□ 0.88
PTPA-223ENST00000452489 RBM41Q96IZ5 413 aaKnown RBP20.54■□□□□ 0.88
PTPA-223ENST00000452489 ZNF317Q96PQ6 595 aaPredicted RBP20.54■□□□□ 0.88
PTPA-223ENST00000452489 LGR5O75473 907 aa20.54■□□□□ 0.88
PTPA-223ENST00000452489 UBOX5O94941 541 aa20.54■□□□□ 0.88
PTPA-223ENST00000452489 KIF5BP33176 963 aa20.54■□□□□ 0.88
PTPA-223ENST00000452489 ZBED6P86452 979 aa20.54■□□□□ 0.88
PTPA-223ENST00000452489 KLHL7Q8IXQ5 586 aa20.54■□□□□ 0.88
PTPA-223ENST00000452489 UBLCP1Q8WVY7 318 aaPredicted RBP20.54■□□□□ 0.88
PTPA-223ENST00000452489 PCMTD1Q96MG8 357 aaPredicted RBP20.54■□□□□ 0.88
PTPA-223ENST00000452489 FAM129AQ9BZQ8 928 aa20.54■□□□□ 0.88
PTPA-223ENST00000452489 PDHA1P08559 390 aa20.53■□□□□ 0.88
PTPA-223ENST00000452489 RARAP10276 462 aa20.53■□□□□ 0.88
PTPA-223ENST00000452489 ERVK-9P63128 1117 aa20.53■□□□□ 0.88
PTPA-223ENST00000452489 NCAPG2Q86XI2 1143 aa20.53■□□□□ 0.88
PTPA-223ENST00000452489 PROCA1Q8NCQ7 364 aaPredicted RBP20.53■□□□□ 0.88
PTPA-223ENST00000452489 ZFAND2BQ8WV99 257 aa20.53■□□□□ 0.88
PTPA-223ENST00000452489 MTMR8Q96EF0 704 aa20.53■□□□□ 0.88
PTPA-223ENST00000452489 MTRQ99707 1265 aa20.53■□□□□ 0.88
PTPA-223ENST00000452489 SYT15Q9BQS2 421 aa20.53■□□□□ 0.88
PTPA-223ENST00000452489 UBAC1Q9BSL1 405 aa20.53■□□□□ 0.88
PTPA-223ENST00000452489 MTFR1LQ9H019 292 aa20.53■□□□□ 0.88
PTPA-223ENST00000452489 ADAM22Q9P0K1 906 aa20.53■□□□□ 0.88
PTPA-223ENST00000452489 SWAP70Q9UH65 585 aa20.53■□□□□ 0.88
PTPA-223ENST00000452489 AFF2P51816 1311 aa20.53■□□□□ 0.88
PTPA-223ENST00000452489 STK36Q9NRP7 1315 aa20.53■□□□□ 0.88
PTPA-223ENST00000452489 NWD1Q149M9 1564 aa20.53■□□□□ 0.88
PTPA-223ENST00000452489 IFIT1P09914 478 aaKnown RBP20.53■□□□□ 0.88
PTPA-223ENST00000452489 ELAC2Q9BQ52 826 aaKnown RBP20.53■□□□□ 0.88
PTPA-223ENST00000452489 NEUROG2Q9H2A3 272 aa20.53■□□□□ 0.88
PTPA-223ENST00000452489 GPR75-ASB3A0A0A6YYF3 556 aa20.52■□□□□ 0.88
PTPA-223ENST00000452489 FLT3P36888 993 aa20.52■□□□□ 0.88
PTPA-223ENST00000452489 ADAM9Q13443 819 aa20.52■□□□□ 0.88
PTPA-223ENST00000452489 AGBL2Q5U5Z8 902 aa20.52■□□□□ 0.88
PTPA-223ENST00000452489 PROSER2Q86WR7 435 aaPredicted RBP20.52■□□□□ 0.88
PTPA-223ENST00000452489 TBC1D10CQ8IV04 446 aa20.52■□□□□ 0.88
PTPA-223ENST00000452489 MYD88Q99836 296 aa20.52■□□□□ 0.88
PTPA-223ENST00000452489 ECT2Q9H8V3 914 aa20.52■□□□□ 0.88
PTPA-223ENST00000452489 ARHGAP20Q9P2F6 1191 aa20.52■□□□□ 0.88
PTPA-223ENST00000452489 WDR35Q9P2L0 1181 aa20.52■□□□□ 0.88
PTPA-223ENST00000452489 ASB3Q9Y575 518 aa20.52■□□□□ 0.88
PTPA-223ENST00000452489 SLIT1O75093 1534 aa20.52■□□□□ 0.88
PTPA-223ENST00000452489 DDX58O95786 925 aaKnown RBP20.52■□□□□ 0.87
PTPA-223ENST00000452489 SRGNP10124 158 aa20.52■□□□□ 0.87
PTPA-223ENST00000452489 ITIH4Q14624 930 aa20.52■□□□□ 0.87
PTPA-223ENST00000452489 PIGWQ7Z7B1 504 aa20.52■□□□□ 0.87
PTPA-223ENST00000452489 LRRC34Q8IZ02 419 aa20.52■□□□□ 0.87
PTPA-223ENST00000452489 CMTR1Q8N1G2 835 aaKnown RBP20.52■□□□□ 0.87
PTPA-223ENST00000452489 FOXP1Q9H334 677 aaPredicted RBP20.52■□□□□ 0.87
PTPA-223ENST00000452489 PCMTD2Q9NV79 361 aa20.52■□□□□ 0.87
PTPA-223ENST00000452489 FBXL5Q9UKA1 691 aa20.52■□□□□ 0.87
PTPA-223ENST00000452489 H7C1D1 291 aa20.51■□□□□ 0.87
PTPA-223ENST00000452489 KIF11P52732 1056 aa20.51■□□□□ 0.87
PTPA-223ENST00000452489 FKBP4Q02790 459 aaKnown RBP eCLIP20.51■□□□□ 0.87
PTPA-223ENST00000452489 HLFQ16534 295 aa20.51■□□□□ 0.87
PTPA-223ENST00000452489 IFI16Q16666 785 aaKnown RBP20.51■□□□□ 0.87
PTPA-223ENST00000452489 TEX9Q8N6V9 391 aa20.51■□□□□ 0.87
PTPA-223ENST00000452489 TRIM4Q9C037 500 aa20.51■□□□□ 0.87
PTPA-223ENST00000452489 PUS7LQ9H0K6 701 aaKnown RBP20.51■□□□□ 0.87
PTPA-223ENST00000452489 PICK1Q9NRD5 415 aa20.51■□□□□ 0.87
PTPA-223ENST00000452489 WDR19Q8NEZ3 1342 aa20.51■□□□□ 0.87
PTPA-223ENST00000452489 MYH7P12883 1935 aa20.51■□□□□ 0.87
PTPA-223ENST00000452489 KDM3BQ7LBC6 1761 aa20.51■□□□□ 0.87
PTPA-223ENST00000452489 B4E1Z4 1266 aa20.51■□□□□ 0.87
PTPA-223ENST00000452489 WNT7AO00755 349 aa20.51■□□□□ 0.87
PTPA-223ENST00000452489 FMNL1O95466 1100 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms