RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 ADCY3O60266 1144 aa13.63□□□□□ -0.23
LINC00339-205ENST00000452322 FOSP01100 380 aaPredicted RBP13.63□□□□□ -0.23
LINC00339-205ENST00000452322 IGHA2P01877 340 aa13.63□□□□□ -0.23
LINC00339-205ENST00000452322 HSP90AA1P07900 732 aaKnown RBP13.63□□□□□ -0.23
LINC00339-205ENST00000452322 NPY5RQ15761 445 aa13.63□□□□□ -0.23
LINC00339-205ENST00000452322 KRT40Q6A162 431 aa13.63□□□□□ -0.23
LINC00339-205ENST00000452322 FBXO46Q6PJ61 603 aaPredicted RBP13.63□□□□□ -0.23
LINC00339-205ENST00000452322 MAMDC4Q6UXC1 1216 aa13.63□□□□□ -0.23
LINC00339-205ENST00000452322 FCHSD1Q86WN1 690 aa13.63□□□□□ -0.23
LINC00339-205ENST00000452322 BLIDQ8IZY5 108 aa13.63□□□□□ -0.23
LINC00339-205ENST00000452322 SLAIN1Q8ND83 568 aa13.63□□□□□ -0.23
LINC00339-205ENST00000452322 FBXO18Q8NFZ0 1043 aa13.63□□□□□ -0.23
LINC00339-205ENST00000452322 NSUN6Q8TEA1 469 aaKnown RBP13.63□□□□□ -0.23
LINC00339-205ENST00000452322 TRIB2Q92519 343 aa13.63□□□□□ -0.23
LINC00339-205ENST00000452322 TAAR1Q96RJ0 339 aa13.63□□□□□ -0.23
LINC00339-205ENST00000452322 RMDN3Q96TC7 470 aa13.63□□□□□ -0.23
LINC00339-205ENST00000452322 MPHOSPH6Q99547 160 aaKnown RBP13.63□□□□□ -0.23
LINC00339-205ENST00000452322 SYNGAP1Q96PV0 1343 aa13.63□□□□□ -0.23
LINC00339-205ENST00000452322 ASB14A6NK59 587 aa13.62□□□□□ -0.23
LINC00339-205ENST00000452322 B4DLN1 442 aa13.62□□□□□ -0.23
LINC00339-205ENST00000452322 M0R2N6 131 aa13.62□□□□□ -0.23
LINC00339-205ENST00000452322 MMP1P03956 469 aa13.62□□□□□ -0.23
LINC00339-205ENST00000452322 CCL14Q16627 93 aa13.62□□□□□ -0.23
LINC00339-205ENST00000452322 IWS1Q96ST2 819 aa13.62□□□□□ -0.23
LINC00339-205ENST00000452322 TINF2Q9BSI4 451 aa13.62□□□□□ -0.23
LINC00339-205ENST00000452322 BRMS1Q9HCU9 246 aa13.62□□□□□ -0.23
LINC00339-205ENST00000452322 PXMP2Q9NR77 195 aa13.62□□□□□ -0.23
LINC00339-205ENST00000452322 FLRT1Q9NZU1 646 aa13.62□□□□□ -0.23
LINC00339-205ENST00000452322 BIN2Q9UBW5 565 aaPredicted RBP13.62□□□□□ -0.23
LINC00339-205ENST00000452322 RPTORQ8N122 1335 aa13.62□□□□□ -0.23
LINC00339-205ENST00000452322 HMGCRP04035 888 aa13.61□□□□□ -0.23
LINC00339-205ENST00000452322 PDCP20941 246 aa13.61□□□□□ -0.23
LINC00339-205ENST00000452322 EDNRBP24530 442 aa13.61□□□□□ -0.23
LINC00339-205ENST00000452322 GRK4P32298 578 aa13.61□□□□□ -0.23
LINC00339-205ENST00000452322 KRT2P35908 639 aa13.61□□□□□ -0.23
LINC00339-205ENST00000452322 ANP32AP39687 249 aaKnown RBP13.61□□□□□ -0.23
LINC00339-205ENST00000452322 FOSBP53539 338 aa13.61□□□□□ -0.23
LINC00339-205ENST00000452322 ARHGEF16Q5VV41 709 aa13.61□□□□□ -0.23
LINC00339-205ENST00000452322 JAKMIP3Q5VZ66 844 aa13.61□□□□□ -0.23
LINC00339-205ENST00000452322 MORC4Q8TE76 937 aa13.61□□□□□ -0.23
LINC00339-205ENST00000452322 PDCD2LQ9BRP1 358 aa13.61□□□□□ -0.23
LINC00339-205ENST00000452322 ANO3Q9BYT9 981 aa13.61□□□□□ -0.23
LINC00339-205ENST00000452322 EHMT1Q9H9B1 1298 aa13.61□□□□□ -0.23
LINC00339-205ENST00000452322 FOXD4L1Q9NU39 408 aa13.61□□□□□ -0.23
LINC00339-205ENST00000452322 TMEM260Q9NX78 707 aa13.61□□□□□ -0.23
LINC00339-205ENST00000452322 PCDHA6Q9UN73 950 aa13.61□□□□□ -0.23
LINC00339-205ENST00000452322 PCDHA8Q9Y5H6 950 aa13.61□□□□□ -0.23
LINC00339-205ENST00000452322 LRRC37A2A6NM11 1700 aa13.6□□□□□ -0.23
LINC00339-205ENST00000452322 ADAMTS3O15072 1205 aa13.6□□□□□ -0.23
LINC00339-205ENST00000452322 ELNP15502 786 aa13.6□□□□□ -0.23
LINC00339-205ENST00000452322 EIF2AK2P19525 551 aaKnown RBP13.6□□□□□ -0.23
LINC00339-205ENST00000452322 GUCY1B3Q02153 619 aa13.6□□□□□ -0.23
LINC00339-205ENST00000452322 PGM5Q15124 567 aa13.6□□□□□ -0.23
LINC00339-205ENST00000452322 SAFBQ15424 915 aaKnown RBP eCLIP13.6□□□□□ -0.23
LINC00339-205ENST00000452322 MFSD14CQ5VZR4 134 aa13.6□□□□□ -0.23
LINC00339-205ENST00000452322 LARP1BQ659C4 914 aaKnown RBP13.6□□□□□ -0.23
LINC00339-205ENST00000452322 ARMCX2Q7L311 632 aa13.6□□□□□ -0.23
LINC00339-205ENST00000452322 DIS3L2Q8IYB7 885 aaKnown RBP13.6□□□□□ -0.23
LINC00339-205ENST00000452322 RASGRP4Q8TDF6 673 aa13.6□□□□□ -0.23
LINC00339-205ENST00000452322 TSHZ2Q9NRE2 1034 aa13.6□□□□□ -0.23
LINC00339-205ENST00000452322 NR3C2P08235 984 aa13.59□□□□□ -0.23
LINC00339-205ENST00000452322 CYP2C19P33261 490 aa13.59□□□□□ -0.23
LINC00339-205ENST00000452322 SREBF1P36956 1147 aa13.59□□□□□ -0.23
LINC00339-205ENST00000452322 PDE4DQ08499 809 aa13.59□□□□□ -0.23
LINC00339-205ENST00000452322 SLC9C1Q4G0N8 1177 aa13.59□□□□□ -0.23
LINC00339-205ENST00000452322 PGBD1Q96JS3 809 aa13.59□□□□□ -0.23
LINC00339-205ENST00000452322 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.59□□□□□ -0.23
LINC00339-205ENST00000452322 NRBP1Q9UHY1 535 aa13.59□□□□□ -0.23
LINC00339-205ENST00000452322 MCM3APO60318 1980 aa13.59□□□□□ -0.23
LINC00339-205ENST00000452322 BTBD18B2RXH4 712 aa13.58□□□□□ -0.23
LINC00339-205ENST00000452322 H3BQV1 296 aa13.58□□□□□ -0.23
LINC00339-205ENST00000452322 SNAI1O95863 264 aaPredicted RBP13.58□□□□□ -0.23
LINC00339-205ENST00000452322 INHAP05111 366 aa13.58□□□□□ -0.23
LINC00339-205ENST00000452322 CCND2P30279 289 aa13.58□□□□□ -0.23
LINC00339-205ENST00000452322 UBXN2AP68543 259 aa13.58□□□□□ -0.23
LINC00339-205ENST00000452322 STXBP2Q15833 593 aa13.58□□□□□ -0.23
LINC00339-205ENST00000452322 MAP3K21Q5TCX8 1036 aa13.58□□□□□ -0.23
LINC00339-205ENST00000452322 IFFO2Q5TF58 517 aa13.58□□□□□ -0.23
LINC00339-205ENST00000452322 PCNX4Q63HM2 1172 aa13.58□□□□□ -0.23
LINC00339-205ENST00000452322 XRRA1Q6P2D8 792 aa13.58□□□□□ -0.23
LINC00339-205ENST00000452322 KRT25Q7Z3Z0 450 aa13.58□□□□□ -0.23
LINC00339-205ENST00000452322 VSIG10LQ86VR7 867 aa13.58□□□□□ -0.23
LINC00339-205ENST00000452322 IL31RAQ8NI17 732 aa13.58□□□□□ -0.23
LINC00339-205ENST00000452322 OXER1Q8TDS5 423 aa13.58□□□□□ -0.23
LINC00339-205ENST00000452322 TNFRSF25Q93038 417 aa13.58□□□□□ -0.23
LINC00339-205ENST00000452322 FOXP1Q9H334 677 aaPredicted RBP13.58□□□□□ -0.23
LINC00339-205ENST00000452322 ABHD16BQ9H3Z7 469 aa13.58□□□□□ -0.23
LINC00339-205ENST00000452322 CNPY2Q9Y2B0 182 aa13.58□□□□□ -0.23
LINC00339-205ENST00000452322 CCDC194A0A1B0GVG4 234 aa13.58□□□□□ -0.24
LINC00339-205ENST00000452322 EIF3JO75822 258 aaKnown RBP13.58□□□□□ -0.24
LINC00339-205ENST00000452322 STAM2O75886 525 aa13.58□□□□□ -0.24
LINC00339-205ENST00000452322 SYT1P21579 422 aa13.58□□□□□ -0.24
LINC00339-205ENST00000452322 ARHGAP4P98171 946 aa13.58□□□□□ -0.24
LINC00339-205ENST00000452322 CACNB2Q08289 660 aaPredicted RBP13.58□□□□□ -0.24
LINC00339-205ENST00000452322 NR5A1Q13285 461 aa13.58□□□□□ -0.24
LINC00339-205ENST00000452322 NONOQ15233 471 aaKnown RBP eCLIP13.58□□□□□ -0.24
LINC00339-205ENST00000452322 SPRYD3Q8NCJ5 442 aa13.58□□□□□ -0.24
LINC00339-205ENST00000452322 SH3TC2Q8TF17 1288 aa13.58□□□□□ -0.24
LINC00339-205ENST00000452322 CRYGNQ8WXF5 182 aa13.58□□□□□ -0.24
LINC00339-205ENST00000452322 MCOLN1Q9GZU1 580 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms