RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 KLF18A0A0U1RQI7 1052 aa18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 A0A1W2PQ45 241 aaPredicted RBP18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 A0A1W2PQY0 241 aa18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 PIK3CDO00329 1044 aa18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 MEIS2O14770 477 aa18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 ZBTB43O43298 467 aa18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 ARIH2O95376 493 aa18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 NR3C2P08235 984 aa18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 HOXA13P31271 388 aaPredicted RBP18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 CDK7P50613 346 aa18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 ATN1P54259 1190 aaPredicted RBP18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 PDE4DQ08499 809 aa18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 VSIG10LQ86VR7 867 aa18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 C7orf61Q8IZ16 206 aa18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 PIBF1Q8WXW3 757 aa18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 GDF15Q99988 308 aa18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 PDCD2LQ9BRP1 358 aa18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 FRMPD4Q14CM0 1322 aa18.64■□□□□ 0.57
SCAMP4-205ENST00000452128 GCOM1H8Y6P7 765 aaPredicted RBP18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 DYNC1LI2O43237 492 aaPredicted RBP18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 ASGR1P07306 291 aa18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 C6orf222P0C671 652 aaPredicted RBP18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 POLR2MP0CAP2 368 aa18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 PSMA5P28066 241 aa18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 ADD1P35611 737 aaKnown RBP18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 RTP1P59025 263 aa18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 APOBRQ0VD83 1088 aa18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 TOB2Q14106 344 aaPredicted RBP18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 GNASQ5JWF2 1037 aa18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 RUFY3Q7L099 469 aa18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 TLK2Q86UE8 772 aa18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 SLC43A3Q8NBI5 491 aa18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 IL31RAQ8NI17 732 aa18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 BRF1Q92994 677 aa18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 RBM28Q9NW13 759 aaKnown RBP18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 COLQQ9Y215 455 aaPredicted RBP18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 ELP1O95163 1332 aa18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 CNTNAP5Q8WYK1 1306 aa18.63■□□□□ 0.57
SCAMP4-205ENST00000452128 hCG_1642624A0A1W2PR95 340 aa18.62■□□□□ 0.57
SCAMP4-205ENST00000452128 EIF3JO75822 258 aaKnown RBP18.62■□□□□ 0.57
SCAMP4-205ENST00000452128 SEC24BO95487 1268 aa18.62■□□□□ 0.57
SCAMP4-205ENST00000452128 CASTP20810 708 aaKnown RBP18.62■□□□□ 0.57
SCAMP4-205ENST00000452128 BEX3Q00994 111 aa18.62■□□□□ 0.57
SCAMP4-205ENST00000452128 PPP2R5BQ15173 497 aa18.62■□□□□ 0.57
SCAMP4-205ENST00000452128 NTRK3Q16288 839 aa18.62■□□□□ 0.57
SCAMP4-205ENST00000452128 RTN1Q16799 776 aa18.62■□□□□ 0.57
SCAMP4-205ENST00000452128 TYW1BQ6NUM6 668 aa18.62■□□□□ 0.57
SCAMP4-205ENST00000452128 SYNE3Q6ZMZ3 975 aa18.62■□□□□ 0.57
SCAMP4-205ENST00000452128 CCDC82Q8N4S0 544 aa18.62■□□□□ 0.57
SCAMP4-205ENST00000452128 PCSK9Q8NBP7 692 aaKnown RBP18.62■□□□□ 0.57
SCAMP4-205ENST00000452128 SCFD2Q8WU76 684 aa18.62■□□□□ 0.57
SCAMP4-205ENST00000452128 GRIN2DO15399 1336 aa18.62■□□□□ 0.57
SCAMP4-205ENST00000452128 TRIOBPQ9H2D6 2365 aa18.62■□□□□ 0.57
SCAMP4-205ENST00000452128 B4DLN1 442 aa18.61■□□□□ 0.57
SCAMP4-205ENST00000452128 MYCNP04198 464 aaPredicted RBP18.61■□□□□ 0.57
SCAMP4-205ENST00000452128 EIF2AK2P19525 551 aaKnown RBP18.61■□□□□ 0.57
SCAMP4-205ENST00000452128 MRPL12P52815 198 aaKnown RBP18.61■□□□□ 0.57
SCAMP4-205ENST00000452128 PGM5Q15124 567 aa18.61■□□□□ 0.57
SCAMP4-205ENST00000452128 STXBP2Q15833 593 aa18.61■□□□□ 0.57
SCAMP4-205ENST00000452128 FSCN1Q16658 493 aaKnown RBP18.61■□□□□ 0.57
SCAMP4-205ENST00000452128 TRIM60Q495X7 471 aa18.61■□□□□ 0.57
SCAMP4-205ENST00000452128 ARHGEF16Q5VV41 709 aa18.61■□□□□ 0.57
SCAMP4-205ENST00000452128 ANKRD33Q7Z3H0 272 aa18.61■□□□□ 0.57
SCAMP4-205ENST00000452128 PCDH10Q9P2E7 1040 aa18.61■□□□□ 0.57
SCAMP4-205ENST00000452128 ZMYND8Q9ULU4 1186 aaPredicted RBP18.61■□□□□ 0.57
SCAMP4-205ENST00000452128 V9GY48 417 aaPredicted RBP18.61■□□□□ 0.57
SCAMP4-205ENST00000452128 MYH6P13533 1939 aa18.61■□□□□ 0.57
SCAMP4-205ENST00000452128 A6NJR5 290 aa18.6■□□□□ 0.57
SCAMP4-205ENST00000452128 NKRFO15226 690 aaKnown RBP eCLIP18.6■□□□□ 0.572e-6■□□□□ 8.4
SCAMP4-205ENST00000452128 PDIA3P30101 505 aaKnown RBP18.6■□□□□ 0.57
SCAMP4-205ENST00000452128 MRPS9P82933 396 aaKnown RBP18.6■□□□□ 0.57
SCAMP4-205ENST00000452128 TLE2Q04725 743 aa18.6■□□□□ 0.57
SCAMP4-205ENST00000452128 USP17L6PQ6QN14 398 aa18.6■□□□□ 0.57
SCAMP4-205ENST00000452128 COPS5Q92905 334 aa18.6■□□□□ 0.57
SCAMP4-205ENST00000452128 TOX2Q96NM4 488 aa18.6■□□□□ 0.57
SCAMP4-205ENST00000452128 MPHOSPH6Q99547 160 aaKnown RBP18.6■□□□□ 0.57
SCAMP4-205ENST00000452128 SPC25Q9HBM1 224 aa18.6■□□□□ 0.57
SCAMP4-205ENST00000452128 DDX41Q9UJV9 622 aaKnown RBP18.6■□□□□ 0.57
SCAMP4-205ENST00000452128 LAMA3Q16787 3333 aa18.59■□□□□ 0.57
SCAMP4-205ENST00000452128 GOLGA8AA7E2F4 631 aa18.59■□□□□ 0.57
SCAMP4-205ENST00000452128 GOLGA8BA8MQT2 603 aa18.59■□□□□ 0.57
SCAMP4-205ENST00000452128 BMP8BP34820 402 aa18.59■□□□□ 0.57
SCAMP4-205ENST00000452128 PKN1Q16512 942 aa18.59■□□□□ 0.57
SCAMP4-205ENST00000452128 HABP4Q5JVS0 413 aaKnown RBP18.59■□□□□ 0.57
SCAMP4-205ENST00000452128 WWC2Q6AWC2 1192 aa18.59■□□□□ 0.57
SCAMP4-205ENST00000452128 AP5M1Q9H0R1 490 aa18.59■□□□□ 0.57
SCAMP4-205ENST00000452128 ALDH8A1Q9H2A2 487 aaPredicted RBP18.59■□□□□ 0.57
SCAMP4-205ENST00000452128 RBM27Q9P2N5 1060 aaKnown RBP18.59■□□□□ 0.57
SCAMP4-205ENST00000452128 SEC63Q9UGP8 760 aaKnown RBP18.59■□□□□ 0.57
SCAMP4-205ENST00000452128 TRIM43BA6NCK2 446 aa18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 SLC34A2O95436 690 aa18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 TXNP10599 105 aaKnown RBP18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 SYN1P17600 705 aa18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 ANAPC15P60006 121 aa18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 ARHGAP1Q07960 439 aa18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 TTLL4Q14679 1199 aa18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 CXCL17Q6UXB2 119 aa18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 CHRDL2Q6WN34 429 aa18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 NOL8Q76FK4 1167 aaKnown RBP18.58■□□□□ 0.56
SCAMP4-205ENST00000452128 SH3RF1Q7Z6J0 888 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms