RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 Q4G0T1 1027 aa12.72□□□□□ -0.37
NDUFA3-209ENST00000451517 SNRNP48Q6IEG0 339 aaKnown RBP12.72□□□□□ -0.37
NDUFA3-209ENST00000451517 LBX2Q6XYB7 198 aa12.72□□□□□ -0.37
NDUFA3-209ENST00000451517 FASTKD5Q7L8L6 764 aaKnown RBP12.72□□□□□ -0.37
NDUFA3-209ENST00000451517 FCHSD1Q86WN1 690 aa12.72□□□□□ -0.37
NDUFA3-209ENST00000451517 TRERF1Q96PN7 1200 aa12.72□□□□□ -0.37
NDUFA3-209ENST00000451517 PYM1Q9BRP8 204 aaKnown RBP12.72□□□□□ -0.37
NDUFA3-209ENST00000451517 TEX13BQ9BXU2 312 aa12.72□□□□□ -0.37
NDUFA3-209ENST00000451517 CCSER1Q9C0I3 900 aa12.72□□□□□ -0.37
NDUFA3-209ENST00000451517 MAF1Q9H063 256 aa12.72□□□□□ -0.37
NDUFA3-209ENST00000451517 KCNMB3Q9NPA1 279 aa12.72□□□□□ -0.37
NDUFA3-209ENST00000451517 RNF146Q9NTX7 359 aa12.72□□□□□ -0.37
NDUFA3-209ENST00000451517 USP25Q9UHP3 1055 aa12.72□□□□□ -0.37
NDUFA3-209ENST00000451517 AGTPBP1Q9UPW5 1226 aa12.72□□□□□ -0.37
NDUFA3-209ENST00000451517 RIPK3Q9Y572 518 aa12.72□□□□□ -0.37
NDUFA3-209ENST00000451517 FRMPD4Q14CM0 1322 aa12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 CELF2O95319 508 aaKnown RBP12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 ITGBL1O95965 494 aaPredicted RBP12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 CCDC192P0DO97 292 aa12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 SNAPC2Q13487 334 aa12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 GPAT2Q6NUI2 795 aa12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 CHADLQ6NUI6 762 aa12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 POTEEQ6S8J3 1075 aa12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 MB21D1Q8N884 522 aa12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 C2orf69Q8N8R5 385 aa12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 IGSF22Q8N9C0 903 aa12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 CNNM3Q8NE01 707 aa12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 SYTL5Q8TDW5 730 aaPredicted RBP12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 HAS1Q92839 578 aa12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 LENG9Q96B70 501 aa12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 RBSNQ9H1K0 784 aa12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 COL20A1Q9P218 1284 aa12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 SERTAD1Q9UHV2 236 aa12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 RABGAP1Q9Y3P9 1069 aa12.71□□□□□ -0.37
NDUFA3-209ENST00000451517 MYH7BA7E2Y1 1941 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 PP2D1A8MPX8 630 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 FAM86B1E9PN63 330 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 TBX3O15119 743 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 FAM86B2P0C5J1 330 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 SLFN14P0C7P3 912 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 TXLNAP40222 546 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 STAT3P40763 770 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 TXKP42681 527 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 MRE11P49959 708 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 IRX3P78415 501 aaPredicted RBP12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 MDM2Q00987 491 aaPredicted RBP12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 TYRO3Q06418 890 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 PABPC4Q13310 644 aaKnown RBP eCLIP12.7□□□□□ -0.388e-13■■■■■ 37
NDUFA3-209ENST00000451517 PDIA5Q14554 519 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 E2F4Q16254 413 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 TMEM266Q2M3C6 531 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 L1TD1Q5T7N2 865 aaKnown RBP12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 KANK3Q6NY19 840 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 SASS6Q6UVJ0 657 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 ETNPPLQ8TBG4 499 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 ZNF526Q8TF50 670 aaPredicted RBP12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 ASCC2Q9H1I8 757 aaPredicted RBP12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 GRPEL1Q9HAV7 217 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 HOMER2Q9NSB8 354 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 KIAA1468Q9P260 1216 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 RBBP6Q7Z6E9 1792 aaKnown RBP12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 SMCHD1A6NHR9 2005 aa12.7□□□□□ -0.38
NDUFA3-209ENST00000451517 IGLV3-22A0A075B6J6 115 aa12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 OSBPP22059 807 aa12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 UBA7P41226 1012 aa12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 TECP42680 631 aa12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 RPS6P62753 249 aaKnown RBP12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 SLC30A10Q6XR72 485 aa12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 RNF207Q6ZRF8 634 aa12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 SH3RF1Q7Z6J0 888 aa12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 CABP7Q86V35 215 aa12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 SLFN12Q8IYM2 578 aa12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 PDILTQ8N807 584 aa12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 IQUBQ8NA54 791 aa12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 DHX58Q96C10 678 aa12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 PANK2Q9BZ23 570 aa12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 RAB34Q9BZG1 259 aa12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 BTBD7Q9P203 1132 aa12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 HOOK1Q9UJC3 728 aaKnown RBP12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 TUBE1Q9UJT0 475 aa12.69□□□□□ -0.38
NDUFA3-209ENST00000451517 COL11A1P12107 1806 aaPredicted RBP12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 CNMDO75829 334 aa12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 CDC25AP30304 524 aa12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 DEKP35659 375 aaKnown RBP12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 ZNF76P36508 570 aa12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 GTF2A2P52657 109 aa12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 HERVK_113P62684 666 aa12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 KARSQ15046 597 aaKnown RBP12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 PRR16Q569H4 304 aa12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 CST9Q5W186 159 aa12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 PDXDC2PQ6P474 469 aa12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 RIOX2Q8IUF8 465 aa12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 CEP57L1Q8IYX8 460 aa12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 CHST13Q8NET6 341 aa12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 CCDC34Q96HJ3 373 aa12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 MS4A4AQ96JQ5 239 aa12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 FAM20AQ96MK3 541 aa12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 MMTAG2Q9BU76 263 aaKnown RBP12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 ACAD9Q9H845 621 aa12.68□□□□□ -0.38
NDUFA3-209ENST00000451517 TTC12Q9H892 705 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms