RNA–Protein interactions for RNA: ENST00000451343.4

TNXB-203, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 3,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-203ENST00000451343 FAM71BQ8TC56 605 aa12.82□□□□□ -0.36
TNXB-203ENST00000451343 HDAC7Q8WUI4 952 aa12.82□□□□□ -0.36
TNXB-203ENST00000451343 BIN2Q9UBW5 565 aaPredicted RBP12.82□□□□□ -0.36
TNXB-203ENST00000451343 OR52Z1P0C646 297 aa12.82□□□□□ -0.36
TNXB-203ENST00000451343 CYLC1P35663 651 aaPredicted RBP12.82□□□□□ -0.36
TNXB-203ENST00000451343 KRT83P78385 493 aa12.82□□□□□ -0.36
TNXB-203ENST00000451343 CCDC96Q2M329 555 aa12.82□□□□□ -0.36
TNXB-203ENST00000451343 ZNF444Q8N0Y2 327 aaPredicted RBP12.82□□□□□ -0.36
TNXB-203ENST00000451343 SEMA6BQ9H3T3 888 aa12.82□□□□□ -0.36
TNXB-203ENST00000451343 TCP11L1Q9NUJ3 509 aa12.82□□□□□ -0.36
TNXB-203ENST00000451343 HPCAL4Q9UM19 191 aa12.82□□□□□ -0.36
TNXB-203ENST00000451343 IPO7O95373 1038 aaKnown RBP12.82□□□□□ -0.36
TNXB-203ENST00000451343 MOCS3O95396 460 aa12.82□□□□□ -0.36
TNXB-203ENST00000451343 POTEDQ86YR6 584 aa12.82□□□□□ -0.36
TNXB-203ENST00000451343 GLIS3Q8NEA6 775 aa12.82□□□□□ -0.36
TNXB-203ENST00000451343 COG1Q8WTW3 980 aa12.82□□□□□ -0.36
TNXB-203ENST00000451343 NLRP3Q96P20 1036 aa12.82□□□□□ -0.36
TNXB-203ENST00000451343 UBA5Q9GZZ9 404 aa12.82□□□□□ -0.36
TNXB-203ENST00000451343 RABEP2Q9H5N1 569 aa12.82□□□□□ -0.36
TNXB-203ENST00000451343 SH3GLB2Q9NR46 395 aa12.82□□□□□ -0.36
TNXB-203ENST00000451343 MKRN1Q9UHC7 482 aaKnown RBP12.82□□□□□ -0.36
TNXB-203ENST00000451343 RTCBQ9Y3I0 505 aaKnown RBP12.82□□□□□ -0.36
TNXB-203ENST00000451343 KIAA1551Q9HCM1 1747 aa12.81□□□□□ -0.36
TNXB-203ENST00000451343 SMCO2A6NFE2 343 aa12.81□□□□□ -0.36
TNXB-203ENST00000451343 TRIM37O94972 964 aa12.81□□□□□ -0.36
TNXB-203ENST00000451343 TXKP42681 527 aa12.81□□□□□ -0.36
TNXB-203ENST00000451343 ZBED6P86452 979 aa12.81□□□□□ -0.36
TNXB-203ENST00000451343 DNAJC14Q6Y2X3 702 aaPredicted RBP12.81□□□□□ -0.36
TNXB-203ENST00000451343 FAM196AQ6ZSG2 479 aa12.81□□□□□ -0.36
TNXB-203ENST00000451343 C2CD5Q86YS7 1000 aa12.81□□□□□ -0.36
TNXB-203ENST00000451343 CCDC155Q8N6L0 562 aa12.81□□□□□ -0.36
TNXB-203ENST00000451343 DHTKD1Q96HY7 919 aaPredicted RBP12.81□□□□□ -0.36
TNXB-203ENST00000451343 SETDB2Q96T68 719 aa12.81□□□□□ -0.36
TNXB-203ENST00000451343 MMTAG2Q9BU76 263 aaKnown RBP12.81□□□□□ -0.36
TNXB-203ENST00000451343 RRP15Q9Y3B9 282 aaKnown RBP12.81□□□□□ -0.36
TNXB-203ENST00000451343 LAMB2P55268 1798 aa12.81□□□□□ -0.36
TNXB-203ENST00000451343 MPHOSPH10O00566 681 aaKnown RBP12.81□□□□□ -0.36
TNXB-203ENST00000451343 NCK2O43639 380 aa12.81□□□□□ -0.36
TNXB-203ENST00000451343 LRRC41Q15345 812 aa12.81□□□□□ -0.36
TNXB-203ENST00000451343 CCDC42Q96M95 316 aa12.81□□□□□ -0.36
TNXB-203ENST00000451343 ZC3H4Q9UPT8 1303 aaKnown RBP12.81□□□□□ -0.36
TNXB-203ENST00000451343 LDHBP07195 334 aaKnown RBP12.8□□□□□ -0.36
TNXB-203ENST00000451343 RASA1P20936 1047 aa12.8□□□□□ -0.36
TNXB-203ENST00000451343 GGCXP38435 758 aa12.8□□□□□ -0.36
TNXB-203ENST00000451343 SLC7A5Q01650 507 aa12.8□□□□□ -0.36
TNXB-203ENST00000451343 CLEC4GQ6UXB4 293 aa12.8□□□□□ -0.36
TNXB-203ENST00000451343 LRRC31Q6UY01 552 aa12.8□□□□□ -0.36
TNXB-203ENST00000451343 ARHGEF1Q92888 912 aaKnown RBP12.8□□□□□ -0.36
TNXB-203ENST00000451343 GJA10Q969M2 543 aa12.8□□□□□ -0.36
TNXB-203ENST00000451343 PIGSQ96S52 555 aa12.8□□□□□ -0.36
TNXB-203ENST00000451343 SELENOOQ9BVL4 669 aa12.8□□□□□ -0.36
TNXB-203ENST00000451343 MMRN2Q9H8L6 949 aa12.8□□□□□ -0.36
TNXB-203ENST00000451343 ARHGAP20Q9P2F6 1191 aa12.8□□□□□ -0.36
TNXB-203ENST00000451343 PALM3A6NDB9 673 aaPredicted RBP12.8□□□□□ -0.36
TNXB-203ENST00000451343 EIF3CLB5ME19 914 aaKnown RBP12.8□□□□□ -0.36
TNXB-203ENST00000451343 RFC4P35249 363 aa12.8□□□□□ -0.36
TNXB-203ENST00000451343 DNA2P51530 1060 aa12.8□□□□□ -0.36
TNXB-203ENST00000451343 KIF5AQ12840 1032 aa12.8□□□□□ -0.36
TNXB-203ENST00000451343 SRLQ86TD4 932 aa12.8□□□□□ -0.36
TNXB-203ENST00000451343 TBCKQ8TEA7 893 aa12.8□□□□□ -0.36
TNXB-203ENST00000451343 EIF3CQ99613 913 aaKnown RBP12.8□□□□□ -0.36
TNXB-203ENST00000451343 ANKIB1Q9P2G1 1089 aa12.8□□□□□ -0.36
TNXB-203ENST00000451343 LAMB1P07942 1786 aa12.8□□□□□ -0.36
TNXB-203ENST00000451343 TUBB4BP68371 445 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 NONOQ15233 471 aaKnown RBP eCLIP12.79□□□□□ -0.36
TNXB-203ENST00000451343 NFRKBQ6P4R8 1299 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 RRP36Q96EU6 259 aaKnown RBP12.79□□□□□ -0.36
TNXB-203ENST00000451343 CWC15Q9P013 229 aaKnown RBP12.79□□□□□ -0.36
TNXB-203ENST00000451343 DMGDHQ9UI17 866 aaKnown RBP12.79□□□□□ -0.36
TNXB-203ENST00000451343 FRMPD2Q68DX3 1309 aaPredicted RBP12.79□□□□□ -0.36
TNXB-203ENST00000451343 MYMKA6NI61 221 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 PRPF6O94906 941 aaKnown RBP12.79□□□□□ -0.36
TNXB-203ENST00000451343 EIF4A3P38919 411 aaKnown RBP12.79□□□□□ -0.36
TNXB-203ENST00000451343 NOP2P46087 812 aaKnown RBP12.79□□□□□ -0.36
TNXB-203ENST00000451343 VAV2P52735 878 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 NFIXQ14938 502 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 TMC4Q7Z404 712 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 CLEC10AQ8IUN9 316 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 DAGLBQ8NCG7 672 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 FAM212AQ96EL1 285 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 NUDT12Q9BQG2 462 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 IFIH1Q9BYX4 1025 aaKnown RBP12.79□□□□□ -0.36
TNXB-203ENST00000451343 POTEMA6NI47 508 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 GNAQP50148 359 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 SPA17Q15506 151 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 AFAP1L1Q8TED9 768 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 LRRC1Q9BTT6 524 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 ACBD3Q9H3P7 528 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 KANSL2Q9H9L4 492 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 LRRC4BQ9NT99 713 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 SALL4Q9UJQ4 1053 aa12.79□□□□□ -0.36
TNXB-203ENST00000451343 BICDL2A1A5D9 508 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 AGPSO00116 658 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 CKAP4Q07065 602 aaKnown RBP12.78□□□□□ -0.36
TNXB-203ENST00000451343 BIRC2Q13490 618 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 RRAGAQ7L523 313 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 NEK8Q86SG6 692 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 CCDC47Q96A33 483 aaKnown RBP12.78□□□□□ -0.36
TNXB-203ENST00000451343 ZMYND12Q9H0C1 365 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 EHD4Q9H223 541 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms