RNA–Protein interactions for RNA: ENST00000450650.5

CAPN13-202, Transcript of calpain 13, humanhuman

TSL 2

Gene CAPN13, Length 2,328 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-202ENST00000450650 MCM9Q9NXL9 1143 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 UTP6Q9NYH9 597 aaKnown RBP10.45□□□□□ -0.74
CAPN13-202ENST00000450650 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.45□□□□□ -0.74
CAPN13-202ENST00000450650 MYH2Q9UKX2 1941 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 COL11A2P13942 1736 aaPredicted RBP10.45□□□□□ -0.74
CAPN13-202ENST00000450650 DYTNA2CJ06 578 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 USP17L15C9J2P7 530 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 USP17L10C9JJH3 530 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 USP17L13C9JLJ4 530 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 USP17L11C9JVI0 530 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 USP17L18D6R9N7 530 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 USP17L22D6RA61 530 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 USP17L17D6RBQ6 530 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 USP17L19D6RCP7 530 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 USP17L20D6RJB6 530 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 FAM200BP0CF97 657 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 H2AFXP16104 143 aaPredicted RBP10.45□□□□□ -0.74
CAPN13-202ENST00000450650 IFNAR1P17181 557 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 TPP2P29144 1249 aaPredicted RBP10.45□□□□□ -0.74
CAPN13-202ENST00000450650 MRPL12P52815 198 aaKnown RBP10.45□□□□□ -0.74
CAPN13-202ENST00000450650 PDE4BQ07343 736 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 SSRP1Q08945 709 aaKnown RBP10.45□□□□□ -0.74
CAPN13-202ENST00000450650 USP17L24Q0WX57 530 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 LRRC41Q15345 812 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 BRAPQ7Z569 592 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 ELOA2Q8IYF1 753 aaPredicted RBP10.45□□□□□ -0.74
CAPN13-202ENST00000450650 ENAHQ8N8S7 591 aaPredicted RBP10.45□□□□□ -0.74
CAPN13-202ENST00000450650 FAM200AQ8TCP9 573 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 SH3RF3Q8TEJ3 882 aaPredicted RBP10.45□□□□□ -0.74
CAPN13-202ENST00000450650 RTFDC1Q9BY42 306 aaPredicted RBP10.45□□□□□ -0.74
CAPN13-202ENST00000450650 TMOD4Q9NZQ9 345 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 RCOR1Q9UKL0 485 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 PYCARDQ9ULZ3 195 aa10.45□□□□□ -0.74
CAPN13-202ENST00000450650 USP17L3A6NCW0 530 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 USP17L4A6NCW7 530 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 CYP2D6P10635 497 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 CEBPZQ03701 1054 aaKnown RBP10.44□□□□□ -0.74
CAPN13-202ENST00000450650 IFIT1BQ5T764 474 aaKnown RBP10.44□□□□□ -0.74
CAPN13-202ENST00000450650 USP17L2Q6R6M4 530 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 USP17L1Q7RTZ2 530 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 SLF2Q8IX21 1173 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 WASF1Q92558 559 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 USP28Q96RU2 1077 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 COA1Q9GZY4 146 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 CLSTN2Q9H4D0 955 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 USP25Q9UHP3 1055 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 DCTN4Q9UJW0 460 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 FAM205AQ6ZU69 1335 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 PRMT3O60678 531 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 ADCY5O95622 1261 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 NT5C2P49902 561 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 RACK1P63244 317 aaKnown RBP10.44□□□□□ -0.74
CAPN13-202ENST00000450650 ARHGAP4P98171 946 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 EVX2Q03828 476 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 PPP2R5BQ15173 497 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 CAMK4Q16566 473 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 DPP8Q6V1X1 898 aaPredicted RBP10.44□□□□□ -0.74
CAPN13-202ENST00000450650 TAX1BP1Q86VP1 789 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 IQCF2Q8IXL9 164 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 TRIM22Q8IYM9 498 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 PGBD3Q8N328 593 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 ARL10Q8N8L6 244 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 FANCBQ8NB91 859 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 SMCR8Q8TEV9 937 aaPredicted RBP10.44□□□□□ -0.74
CAPN13-202ENST00000450650 NUP133Q8WUM0 1156 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 LRRN4Q8WUT4 740 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 UPF1Q92900 1129 aaKnown RBP eCLIP10.44□□□□□ -0.74
CAPN13-202ENST00000450650 PGBD1Q96JS3 809 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 AIFM3Q96NN9 605 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 SLC26A6Q9BXS9 759 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 ZC3H12CQ9C0D7 883 aaKnown RBP10.44□□□□□ -0.74
CAPN13-202ENST00000450650 GJB4Q9NTQ9 266 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 PARP2Q9UGN5 583 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 INTUQ9ULD6 942 aa10.44□□□□□ -0.74
CAPN13-202ENST00000450650 GPR75-ASB3A0A0A6YYF3 556 aa10.43□□□□□ -0.74
CAPN13-202ENST00000450650 RIMBP2O15034 1052 aa10.43□□□□□ -0.74
CAPN13-202ENST00000450650 LILRB3O75022 631 aa10.43□□□□□ -0.74
CAPN13-202ENST00000450650 XRCC5P13010 732 aaKnown RBP10.43□□□□□ -0.74
CAPN13-202ENST00000450650 BTDP43251 543 aa10.43□□□□□ -0.74
CAPN13-202ENST00000450650 KIF23Q02241 960 aaPredicted RBP10.43□□□□□ -0.74
CAPN13-202ENST00000450650 TRIM29Q14134 588 aa10.43□□□□□ -0.74
CAPN13-202ENST00000450650 C12orf60Q5U649 245 aa10.43□□□□□ -0.74
CAPN13-202ENST00000450650 RSBN1LQ6PCB5 846 aaPredicted RBP10.43□□□□□ -0.74
CAPN13-202ENST00000450650 CCDC73Q6ZRK6 1079 aa10.43□□□□□ -0.74
CAPN13-202ENST00000450650 CATIPQ7Z7H3 387 aa10.43□□□□□ -0.74
CAPN13-202ENST00000450650 CLP1Q92989 425 aaKnown RBP10.43□□□□□ -0.74
CAPN13-202ENST00000450650 ERO1AQ96HE7 468 aa10.43□□□□□ -0.74
CAPN13-202ENST00000450650 C8orf48Q96LL4 319 aa10.43□□□□□ -0.74
CAPN13-202ENST00000450650 JPH2Q9BR39 696 aaPredicted RBP10.43□□□□□ -0.74
CAPN13-202ENST00000450650 FTOQ9C0B1 505 aaKnown RBP eCLIP10.43□□□□□ -0.74
CAPN13-202ENST00000450650 QSER1Q2KHR3 1735 aa10.43□□□□□ -0.74
CAPN13-202ENST00000450650 ECM29Q5VYK3 1845 aa10.43□□□□□ -0.74
CAPN13-202ENST00000450650 DLEC1Q9Y238 1755 aa10.43□□□□□ -0.74
CAPN13-202ENST00000450650 POLR3DP05423 398 aaPredicted RBP10.42□□□□□ -0.74
CAPN13-202ENST00000450650 MYL1P05976 194 aa10.42□□□□□ -0.74
CAPN13-202ENST00000450650 PLCG2P16885 1265 aa10.42□□□□□ -0.74
CAPN13-202ENST00000450650 ZNF24P17028 368 aa10.42□□□□□ -0.74
CAPN13-202ENST00000450650 NF2P35240 595 aa10.42□□□□□ -0.74
CAPN13-202ENST00000450650 PEX19P40855 299 aa10.42□□□□□ -0.74
CAPN13-202ENST00000450650 TYRO3Q06418 890 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms