RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 GRAMD1CQ8IYS0 662 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 TBC1D5Q92609 795 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 SMARCE1Q969G3 411 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 PDLIM2Q96JY6 352 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 BPIFA3Q9BQP9 254 aa16.1■□□□□ 0.17
USP39-207ENST00000450066 STAT6P42226 847 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 GHRHRQ02643 423 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 Q4G0T1 1027 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 RRAGBQ5VZM2 374 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 CABP7Q86V35 215 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 FCHSD1Q86WN1 690 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 TTC12Q9H892 705 aaPredicted RBP16.09■□□□□ 0.17
USP39-207ENST00000450066 KCNMB3Q9NPA1 279 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 LRWD1Q9UFC0 647 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 CTDP1Q9Y5B0 961 aaPredicted RBP16.09■□□□□ 0.17
USP39-207ENST00000450066 HSD17B4P51659 736 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 COG2Q14746 738 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 EAPPQ56P03 285 aaPredicted RBP16.09■□□□□ 0.17
USP39-207ENST00000450066 MCF2L2Q86YR7 1114 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 CPXCR1Q8N123 301 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 TRIML1Q8N9V2 468 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 RASSF8Q8NHQ8 419 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 CLEC4DQ8WXI8 215 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 WDR90Q96KV7 1748 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 EHMT1Q9H9B1 1298 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 RAVER2Q9HCJ3 691 aaKnown RBP16.09■□□□□ 0.17
USP39-207ENST00000450066 ADAMTS5Q9UNA0 930 aa16.09■□□□□ 0.17
USP39-207ENST00000450066 PARP14Q460N5 1801 aa16.08■□□□□ 0.16
USP39-207ENST00000450066 TBX3O15119 743 aa16.08■□□□□ 0.16
USP39-207ENST00000450066 MARCH6O60337 910 aa16.08■□□□□ 0.16
USP39-207ENST00000450066 DSG3P32926 999 aa16.08■□□□□ 0.16
USP39-207ENST00000450066 AFMP43652 599 aa16.08■□□□□ 0.16
USP39-207ENST00000450066 CATSPERGQ6ZRH7 1159 aa16.08■□□□□ 0.16
USP39-207ENST00000450066 SLFN12Q8IYM2 578 aa16.08■□□□□ 0.16
USP39-207ENST00000450066 ANKRD13AQ8IZ07 590 aa16.08■□□□□ 0.16
USP39-207ENST00000450066 SAMD3Q8N6K7 520 aa16.08■□□□□ 0.16
USP39-207ENST00000450066 MMTAG2Q9BU76 263 aaKnown RBP16.08■□□□□ 0.16
USP39-207ENST00000450066 CUEDC2Q9H467 287 aa16.08■□□□□ 0.16
USP39-207ENST00000450066 MAP3K20Q9NYL2 800 aaKnown RBP16.08■□□□□ 0.16
USP39-207ENST00000450066 PCDHA12Q9UN75 941 aa16.08■□□□□ 0.16
USP39-207ENST00000450066 OTOFQ9HC10 1997 aa16.08■□□□□ 0.16
USP39-207ENST00000450066 OAZ1P54368 228 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 PPATQ06203 517 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 DPYDQ12882 1025 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 NAALADL2Q58DX5 795 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 ATG4CQ96DT6 458 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 GSDMAQ96QA5 445 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 MAN1B1Q9UKM7 699 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 FAM86B1E9PN63 330 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 GOLGA6L19H0YKK7 550 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 FAM86B2P0C5J1 330 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 ALAS1P13196 640 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 MORC3Q14149 939 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 PRR16Q569H4 304 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 ISM2Q6H9L7 571 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 DHX40Q8IX18 779 aaKnown RBP16.07■□□□□ 0.16
USP39-207ENST00000450066 ETNPPLQ8TBG4 499 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 LENG9Q96B70 501 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 MTRQ99707 1265 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 MAGEF1Q9HAY2 307 aa16.07■□□□□ 0.16
USP39-207ENST00000450066 MYPNQ86TC9 1320 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 RLFQ13129 1914 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 BECN2A8MW95 431 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 NFIBO00712 420 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 GTPBP6O43824 516 aaPredicted RBP16.06■□□□□ 0.16
USP39-207ENST00000450066 BMP6P22004 513 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 ERO1BQ86YB8 467 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 REPS2Q8NFH8 660 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 CALML4Q96GE6 196 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 FAM20AQ96MK3 541 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 HOXC10Q9NYD6 342 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 MYL1P05976 194 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 PLCG1P19174 1290 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 ZNF76P36508 570 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 TTLL12Q14166 644 aaPredicted RBP16.06■□□□□ 0.16
USP39-207ENST00000450066 KRT79Q5XKE5 535 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 WNK4Q96J92 1243 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 ELP3Q9H9T3 547 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 KBTBD4Q9NVX7 518 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 RABGAP1Q9Y3P9 1069 aa16.06■□□□□ 0.16
USP39-207ENST00000450066 POTEMA6NI47 508 aa16.05■□□□□ 0.16
USP39-207ENST00000450066 ATP2A1O14983 1001 aa16.05■□□□□ 0.16
USP39-207ENST00000450066 MLKLQ8NB16 471 aa16.05■□□□□ 0.16
USP39-207ENST00000450066 CNKSR2Q8WXI2 1034 aa16.05■□□□□ 0.16
USP39-207ENST00000450066 IGLV3-22A0A075B6J6 115 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 SPDYE5A6NIY4 337 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 ADCY5O95622 1261 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 MUM1L1Q5H9M0 696 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 ARMC9Q7Z3E5 817 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 AOPEPQ8N6M6 819 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 STAMQ92783 540 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 GJA10Q969M2 543 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 CLMNQ96JQ2 1002 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 TRERF1Q96PN7 1200 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 PLIN2Q99541 437 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 HOMER2Q9NSB8 354 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 DACH1Q9UI36 760 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 CXCL11O14625 94 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 IRF6O14896 467 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 IKBKBO14920 756 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms