RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ERCC3P19447 782 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 IER5Q5VY09 327 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 CATSPER4Q7RTX7 472 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 RNF186Q9NXI6 227 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 AKAP7Q9P0M2 348 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 HEMK1Q9Y5R4 338 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 IRF6O14896 467 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 PRKAB2O43741 272 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 PRPF6O94906 941 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 FOXR1Q6PIV2 292 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 Q6ZUG5 572 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 ZNF654Q8IZM8 581 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 PARD3BQ8TEW8 1205 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 NSUN4Q96CB9 384 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 SPATA33Q96N06 139 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 FNBP1Q96RU3 617 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 DCP1AQ9NPI6 582 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 CLDND1Q9NY35 253 aa6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 RBM19Q9Y4C8 960 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-209ENST00000448940 GPR75-ASB3A0A0A6YYF3 556 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 H0YCG3 227 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 INO80B-WBP1J3KQ70 363 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 PRKAR2AP13861 404 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 CCT6AP40227 531 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 KRT33BQ14525 404 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 PRR16Q569H4 304 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 RBM23Q86U06 439 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 ATG4CQ96DT6 458 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 AGTPBP1Q9UPW5 1226 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 TACC3Q9Y6A5 838 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 KPNA6O60684 536 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 IL1R1P14778 569 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 BRPF1P55201 1214 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 SETQ01105 290 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 UAP1L1Q3KQV9 507 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 ARHGAP15Q53QZ3 475 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 NSUN7Q8NE18 718 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 NEMP1O14524 444 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 NNMTP40261 264 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 FOXO4P98177 505 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 FPGSQ05932 587 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 PPP2R5AQ15172 486 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 BMP2KLQ5H9B9 411 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 C20orf194Q5TEA3 1177 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 HAUS2Q9NVX0 235 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 AOX1Q06278 1338 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 CABYRO75952 493 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 C4orf50Q6ZRC1 276 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 NAT10Q9H0A0 1025 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 ANTXR1Q9H6X2 564 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 TLE6Q9H808 572 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 FLT1P17948 1338 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 PTPAQ15257 358 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 DGKHQ86XP1 1220 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 ZNF296Q8WUU4 475 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 CYP4A11Q02928 519 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 CYP4A22Q5TCH4 519 aa6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 ASCC2Q9H1I8 757 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 NOP58Q9Y2X3 529 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-209ENST00000448940 KAT6AQ92794 2004 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 SPDYE5A6NIY4 337 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 BNIP3LO60238 219 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 NDUFS2O75306 463 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 INHAP05111 366 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 DNAJB2P25686 324 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 BFSP1Q12934 665 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 DTHD1Q6ZMT9 781 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 OTUD6BQ8N6M0 293 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 FBXO22Q8NEZ5 403 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 KIF2CQ99661 725 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 UNCXA6NJT0 531 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 FIBPO43427 364 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 DDAH1O94760 285 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 AKR1B1P15121 316 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 RPF1Q9H9Y2 349 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 ATP6V0A4Q9HBG4 840 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 SEPT9Q9UHD8 586 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 TLL2Q9Y6L7 1015 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 CYP2D7A0A087X1C5 515 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 FGAP02671 866 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 PSAPP07602 524 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 NFIAQ12857 509 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 PAK2Q13177 524 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 CREB3L3Q68CJ9 461 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 DSTYKQ6XUX3 929 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 RSRC2Q7L4I2 434 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 ANKRD23Q86SG2 305 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 FERMT3Q86UX7 667 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 NUP88Q99567 741 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 APBA2Q99767 749 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 ESYT1Q9BSJ8 1104 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 NYAP2Q9P242 653 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 LRRIQ4A6NIV6 560 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 SPDYE16A6NNV3 312 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 RSPH10B2B2RC85 870 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 EPB41L2O43491 1005 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 RPLP2P05387 115 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 RSPH10BP0C881 870 aa6.27□□□□□ -1.41
CDC42BPA-209ENST00000448940 ACADMP11310 421 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms