RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 WNT8AQ9H1J5 351 aa15.57■□□□□ 0.08
HMGB3-204ENST00000448905 KAT14Q9H8E8 782 aa15.57■□□□□ 0.08
HMGB3-204ENST00000448905 THEGQ9P2T0 379 aa15.57■□□□□ 0.08
HMGB3-204ENST00000448905 CCDC171Q6TFL3 1326 aa15.57■□□□□ 0.08
HMGB3-204ENST00000448905 MCM3APO60318 1980 aa15.56■□□□□ 0.08
HMGB3-204ENST00000448905 HIP1O00291 1037 aa15.56■□□□□ 0.08
HMGB3-204ENST00000448905 SDSP20132 328 aa15.56■□□□□ 0.08
HMGB3-204ENST00000448905 EDNRBP24530 442 aa15.56■□□□□ 0.08
HMGB3-204ENST00000448905 USH1GQ495M9 461 aa15.56■□□□□ 0.08
HMGB3-204ENST00000448905 SLC30A10Q6XR72 485 aa15.56■□□□□ 0.08
HMGB3-204ENST00000448905 DEFB128Q7Z7B8 93 aa15.56■□□□□ 0.08
HMGB3-204ENST00000448905 CCDC155Q8N6L0 562 aa15.56■□□□□ 0.08
HMGB3-204ENST00000448905 PHOSPHO2Q8TCD6 241 aa15.56■□□□□ 0.08
HMGB3-204ENST00000448905 NSUN6Q8TEA1 469 aaKnown RBP15.56■□□□□ 0.08
HMGB3-204ENST00000448905 CTNNA3Q9UI47 895 aa15.56■□□□□ 0.08
HMGB3-204ENST00000448905 CDH23Q9H251 3354 aa15.56■□□□□ 0.08
HMGB3-204ENST00000448905 PITPNM1O00562 1244 aa15.55■□□□□ 0.08
HMGB3-204ENST00000448905 GOLGA8HP0CJ92 632 aa15.55■□□□□ 0.08
HMGB3-204ENST00000448905 RABGGTBP53611 331 aa15.55■□□□□ 0.08
HMGB3-204ENST00000448905 CHMP4BP1P59074 171 aa15.55■□□□□ 0.08
HMGB3-204ENST00000448905 STXBP2Q15833 593 aa15.55■□□□□ 0.08
HMGB3-204ENST00000448905 AAK1Q2M2I8 961 aa15.55■□□□□ 0.08
HMGB3-204ENST00000448905 ZNF589Q86UQ0 364 aaPredicted RBP15.55■□□□□ 0.08
HMGB3-204ENST00000448905 IWS1Q96ST2 819 aa15.55■□□□□ 0.08
HMGB3-204ENST00000448905 LNPKQ9C0E8 428 aa15.55■□□□□ 0.08
HMGB3-204ENST00000448905 UBA5Q9GZZ9 404 aa15.55■□□□□ 0.08
HMGB3-204ENST00000448905 YBX2Q9Y2T7 364 aaKnown RBP15.55■□□□□ 0.08
HMGB3-204ENST00000448905 ABCB11O95342 1321 aa15.54■□□□□ 0.08
HMGB3-204ENST00000448905 GTPBP6O43824 516 aaPredicted RBP15.54■□□□□ 0.08
HMGB3-204ENST00000448905 DHX16O60231 1041 aaKnown RBP15.54■□□□□ 0.08
HMGB3-204ENST00000448905 IQCF3P0C7M6 154 aa15.54■□□□□ 0.08
HMGB3-204ENST00000448905 CASTP20810 708 aaKnown RBP15.54■□□□□ 0.08
HMGB3-204ENST00000448905 ADGRE1Q14246 886 aa15.54■□□□□ 0.08
HMGB3-204ENST00000448905 PNMA1Q8ND90 353 aa15.54■□□□□ 0.08
HMGB3-204ENST00000448905 ZKSCAN3Q9BRR0 538 aa15.54■□□□□ 0.08
HMGB3-204ENST00000448905 DIAPH3Q9NSV4 1193 aa15.54■□□□□ 0.08
HMGB3-204ENST00000448905 MRPL11Q9Y3B7 192 aaKnown RBP15.54■□□□□ 0.08
HMGB3-204ENST00000448905 GREB1LQ9C091 1923 aaPredicted RBP15.54■□□□□ 0.08
HMGB3-204ENST00000448905 MYH4Q9Y623 1939 aa15.53■□□□□ 0.08
HMGB3-204ENST00000448905 PARNO95453 639 aaKnown RBP15.53■□□□□ 0.08
HMGB3-204ENST00000448905 GH1P01241 217 aa15.53■□□□□ 0.08
HMGB3-204ENST00000448905 PTGISQ16647 500 aa15.53■□□□□ 0.08
HMGB3-204ENST00000448905 IMMTQ16891 758 aaKnown RBP15.53■□□□□ 0.08
HMGB3-204ENST00000448905 ASPRV1Q53RT3 343 aa15.53■□□□□ 0.08
HMGB3-204ENST00000448905 B4GALNT3Q6L9W6 998 aa15.53■□□□□ 0.08
HMGB3-204ENST00000448905 ADGRF4Q8IZF3 695 aa15.53■□□□□ 0.08
HMGB3-204ENST00000448905 ANKS1AQ92625 1134 aa15.53■□□□□ 0.08
HMGB3-204ENST00000448905 ZSCAN10Q96SZ4 725 aaPredicted RBP15.53■□□□□ 0.08
HMGB3-204ENST00000448905 SLC9A7Q96T83 725 aa15.53■□□□□ 0.08
HMGB3-204ENST00000448905 KRT23Q9C075 422 aa15.53■□□□□ 0.08
HMGB3-204ENST00000448905 SPTBN5Q9NRC6 3674 aaKnown RBP15.52■□□□□ 0.08
HMGB3-204ENST00000448905 KDM4AO75164 1064 aa15.52■□□□□ 0.08
HMGB3-204ENST00000448905 EIF3JO75822 258 aaKnown RBP15.52■□□□□ 0.08
HMGB3-204ENST00000448905 TRAF1Q13077 416 aa15.52■□□□□ 0.08
HMGB3-204ENST00000448905 SKIV2LQ15477 1246 aaKnown RBP15.52■□□□□ 0.08
HMGB3-204ENST00000448905 CDC37Q16543 378 aaPredicted RBP15.52■□□□□ 0.08
HMGB3-204ENST00000448905 ARHGEF16Q5VV41 709 aa15.52■□□□□ 0.08
HMGB3-204ENST00000448905 CWC27Q6UX04 472 aaKnown RBP15.52■□□□□ 0.08
HMGB3-204ENST00000448905 SEPT14Q6ZU15 432 aa15.52■□□□□ 0.08
HMGB3-204ENST00000448905 CHD1LQ86WJ1 897 aa15.52■□□□□ 0.08
HMGB3-204ENST00000448905 FBXO11Q86XK2 927 aa15.52■□□□□ 0.08
HMGB3-204ENST00000448905 TBC1D10CQ8IV04 446 aa15.52■□□□□ 0.08
HMGB3-204ENST00000448905 CAGE1Q8TC20 777 aa15.52■□□□□ 0.08
HMGB3-204ENST00000448905 COPS5Q92905 334 aa15.52■□□□□ 0.08
HMGB3-204ENST00000448905 RMDN3Q96TC7 470 aa15.52■□□□□ 0.08
HMGB3-204ENST00000448905 UBAC1Q9BSL1 405 aa15.52■□□□□ 0.08
HMGB3-204ENST00000448905 CNNM2Q9H8M5 875 aa15.52■□□□□ 0.08
HMGB3-204ENST00000448905 VAT1LQ9HCJ6 419 aa15.52■□□□□ 0.08
HMGB3-204ENST00000448905 BAIAP3O94812 1187 aa15.51■□□□□ 0.07
HMGB3-204ENST00000448905 PARP1P09874 1014 aaKnown RBP15.51■□□□□ 0.07
HMGB3-204ENST00000448905 MYOGP15173 224 aa15.51■□□□□ 0.07
HMGB3-204ENST00000448905 KCNJ6P48051 423 aa15.51■□□□□ 0.07
HMGB3-204ENST00000448905 DGKDQ16760 1214 aa15.51■□□□□ 0.07
HMGB3-204ENST00000448905 LY6KQ17RY6 165 aa15.51■□□□□ 0.07
HMGB3-204ENST00000448905 CCDC62Q6P9F0 684 aa15.51■□□□□ 0.07
HMGB3-204ENST00000448905 CHST3Q7LGC8 479 aa15.51■□□□□ 0.07
HMGB3-204ENST00000448905 MICALL1Q8N3F8 863 aa15.51■□□□□ 0.07
HMGB3-204ENST00000448905 C7orf31Q8N865 590 aa15.51■□□□□ 0.07
HMGB3-204ENST00000448905 SYTL5Q8TDW5 730 aaPredicted RBP15.51■□□□□ 0.07
HMGB3-204ENST00000448905 ADAMTS19Q8TE59 1207 aa15.51■□□□□ 0.07
HMGB3-204ENST00000448905 AFAP1L1Q8TED9 768 aa15.51■□□□□ 0.07
HMGB3-204ENST00000448905 AFG1LQ8WV93 481 aa15.51■□□□□ 0.07
HMGB3-204ENST00000448905 TAAR1Q96RJ0 339 aa15.51■□□□□ 0.07
HMGB3-204ENST00000448905 ZBED2Q9BTP6 218 aa15.51■□□□□ 0.07
HMGB3-204ENST00000448905 OSBPL3Q9H4L5 887 aa15.51■□□□□ 0.07
HMGB3-204ENST00000448905 MAP3K20Q9NYL2 800 aaKnown RBP15.51■□□□□ 0.07
HMGB3-204ENST00000448905 ZSWIM5Q9P217 1185 aa15.51■□□□□ 0.07
HMGB3-204ENST00000448905 CA3P07451 260 aa15.5■□□□□ 0.07
HMGB3-204ENST00000448905 LAMC2Q13753 1193 aa15.5■□□□□ 0.07
HMGB3-204ENST00000448905 HERC6Q8IVU3 1022 aa15.5■□□□□ 0.07
HMGB3-204ENST00000448905 SMC5Q8IY18 1101 aa15.5■□□□□ 0.07
HMGB3-204ENST00000448905 UHRF1Q96T88 793 aaPredicted RBP15.5■□□□□ 0.07
HMGB3-204ENST00000448905 DSCC1Q9BVC3 393 aa15.5■□□□□ 0.07
HMGB3-204ENST00000448905 KATNAL1Q9BW62 490 aa15.5■□□□□ 0.07
HMGB3-204ENST00000448905 AMNQ9BXJ7 453 aa15.5■□□□□ 0.07
HMGB3-204ENST00000448905 POU3F3P20264 500 aaPredicted RBP15.49■□□□□ 0.07
HMGB3-204ENST00000448905 KCNV1Q6PIU1 500 aa15.49■□□□□ 0.07
HMGB3-204ENST00000448905 SESTD1Q86VW0 696 aa15.49■□□□□ 0.07
HMGB3-204ENST00000448905 PLEKHM2Q8IWE5 1019 aa15.49■□□□□ 0.07
HMGB3-204ENST00000448905 DHX37Q8IY37 1157 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms