RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 PITPNM1O00562 1244 aa21.21■□□□□ 0.99
CHCHD3-203ENST00000448878 ARHGEF15O94989 841 aa21.21■□□□□ 0.99
CHCHD3-203ENST00000448878 TOP1P11387 765 aaKnown RBP21.21■□□□□ 0.99
CHCHD3-203ENST00000448878 MRPL12P52815 198 aaKnown RBP21.21■□□□□ 0.99
CHCHD3-203ENST00000448878 RPS6P62753 249 aaKnown RBP21.21■□□□□ 0.99
CHCHD3-203ENST00000448878 PTGISQ16647 500 aa21.21■□□□□ 0.99
CHCHD3-203ENST00000448878 VPS53Q5VIR6 699 aa21.21■□□□□ 0.99
CHCHD3-203ENST00000448878 DIEXFQ68CQ4 756 aaKnown RBP21.21■□□□□ 0.99
CHCHD3-203ENST00000448878 BTNL9Q6UXG8 535 aa21.21■□□□□ 0.99
CHCHD3-203ENST00000448878 TMEM47Q9BQJ4 181 aa21.21■□□□□ 0.99
CHCHD3-203ENST00000448878 ZBTB47Q9UFB7 747 aaPredicted RBP21.21■□□□□ 0.99
CHCHD3-203ENST00000448878 PTPN11Q06124 597 aaPredicted RBP21.2■□□□□ 0.98
CHCHD3-203ENST00000448878 GRB10Q13322 594 aa21.2■□□□□ 0.98
CHCHD3-203ENST00000448878 CCDC155Q8N6L0 562 aa21.2■□□□□ 0.98
CHCHD3-203ENST00000448878 CLEC4DQ8WXI8 215 aa21.2■□□□□ 0.98
CHCHD3-203ENST00000448878 ANAPC4Q9UJX5 808 aa21.2■□□□□ 0.98
CHCHD3-203ENST00000448878 A6NJR5 290 aa21.19■□□□□ 0.98
CHCHD3-203ENST00000448878 FOXP2O15409 715 aa21.19■□□□□ 0.98
CHCHD3-203ENST00000448878 ORC4O43929 436 aa21.19■□□□□ 0.98
CHCHD3-203ENST00000448878 MX1P20591 662 aa21.19■□□□□ 0.98
CHCHD3-203ENST00000448878 USH1GQ495M9 461 aa21.19■□□□□ 0.98
CHCHD3-203ENST00000448878 CHST3Q7LGC8 479 aa21.19■□□□□ 0.98
CHCHD3-203ENST00000448878 PNMA2Q9UL42 364 aa21.19■□□□□ 0.98
CHCHD3-203ENST00000448878 HCN4Q9Y3Q4 1203 aa21.19■□□□□ 0.98
CHCHD3-203ENST00000448878 XIRP2A4UGR9 3374 aa21.19■□□□□ 0.98
CHCHD3-203ENST00000448878 BAIAP3O94812 1187 aa21.18■□□□□ 0.98
CHCHD3-203ENST00000448878 TMCO2Q7Z6W1 182 aaPredicted RBP21.18■□□□□ 0.98
CHCHD3-203ENST00000448878 DNERQ8NFT8 737 aa21.18■□□□□ 0.98
CHCHD3-203ENST00000448878 LRFN3Q9BTN0 628 aa21.18■□□□□ 0.98
CHCHD3-203ENST00000448878 PDHBP11177 359 aa21.17■□□□□ 0.98
CHCHD3-203ENST00000448878 NOVP48745 357 aa21.17■□□□□ 0.98
CHCHD3-203ENST00000448878 TMEM31Q5JXX7 168 aa21.17■□□□□ 0.98
CHCHD3-203ENST00000448878 SEPT14Q6ZU15 432 aa21.17■□□□□ 0.98
CHCHD3-203ENST00000448878 SPRED2Q7Z698 418 aa21.17■□□□□ 0.98
CHCHD3-203ENST00000448878 CRBNQ96SW2 442 aa21.17■□□□□ 0.98
CHCHD3-203ENST00000448878 MTUS1Q9ULD2 1270 aa21.17■□□□□ 0.98
CHCHD3-203ENST00000448878 PRRC2BQ5JSZ5 2229 aaKnown RBP21.16■□□□□ 0.98
CHCHD3-203ENST00000448878 ARIH2O95376 493 aa21.16■□□□□ 0.98
CHCHD3-203ENST00000448878 CAGE1Q8TC20 777 aa21.16■□□□□ 0.98
CHCHD3-203ENST00000448878 AFG1LQ8WV93 481 aa21.16■□□□□ 0.98
CHCHD3-203ENST00000448878 LCHNA4D1U4 455 aa21.15■□□□□ 0.98
CHCHD3-203ENST00000448878 FGAP02671 866 aa21.15■□□□□ 0.98
CHCHD3-203ENST00000448878 EDNRBP24530 442 aa21.15■□□□□ 0.98
CHCHD3-203ENST00000448878 HAND2P61296 217 aa21.15■□□□□ 0.98
CHCHD3-203ENST00000448878 WDR5P61964 334 aaKnown RBP21.15■□□□□ 0.98
CHCHD3-203ENST00000448878 ZNF543Q08ER8 600 aa21.15■□□□□ 0.98
CHCHD3-203ENST00000448878 LY6KQ17RY6 165 aa21.15■□□□□ 0.98
CHCHD3-203ENST00000448878 GDF6Q6KF10 455 aaPredicted RBP21.15■□□□□ 0.98
CHCHD3-203ENST00000448878 AFAP1L1Q8TED9 768 aa21.15■□□□□ 0.98
CHCHD3-203ENST00000448878 GDPD5Q8WTR4 605 aa21.15■□□□□ 0.98
CHCHD3-203ENST00000448878 HELLSQ9NRZ9 838 aa21.15■□□□□ 0.98
CHCHD3-203ENST00000448878 SCN10AQ9Y5Y9 1956 aa21.14■□□□□ 0.98
CHCHD3-203ENST00000448878 GH1P01241 217 aa21.14■□□□□ 0.97
CHCHD3-203ENST00000448878 GOLGA8HP0CJ92 632 aa21.14■□□□□ 0.97
CHCHD3-203ENST00000448878 ALX1Q15699 326 aa21.14■□□□□ 0.97
CHCHD3-203ENST00000448878 FAM117BQ6P1L5 589 aa21.14■□□□□ 0.97
CHCHD3-203ENST00000448878 LRRC8DQ7L1W4 858 aa21.14■□□□□ 0.97
CHCHD3-203ENST00000448878 EVI5LQ96CN4 794 aa21.14■□□□□ 0.97
CHCHD3-203ENST00000448878 ALG1Q9BT22 464 aa21.14■□□□□ 0.97
CHCHD3-203ENST00000448878 UBA5Q9GZZ9 404 aa21.14■□□□□ 0.97
CHCHD3-203ENST00000448878 TCP11L1Q9NUJ3 509 aa21.14■□□□□ 0.97
CHCHD3-203ENST00000448878 TANC1Q9C0D5 1861 aa21.13■□□□□ 0.97
CHCHD3-203ENST00000448878 WDR19Q8NEZ3 1342 aa21.13■□□□□ 0.97
CHCHD3-203ENST00000448878 LPXNO60711 386 aa21.13■□□□□ 0.97
CHCHD3-203ENST00000448878 MMP3P08254 477 aa21.13■□□□□ 0.97
CHCHD3-203ENST00000448878 FGRP09769 529 aa21.13■□□□□ 0.97
CHCHD3-203ENST00000448878 SELPP16109 830 aa21.13■□□□□ 0.97
CHCHD3-203ENST00000448878 CASTP20810 708 aaKnown RBP21.13■□□□□ 0.97
CHCHD3-203ENST00000448878 DEFB103AP81534 67 aa21.13■□□□□ 0.97
CHCHD3-203ENST00000448878 CNKSR3Q6P9H4 555 aa21.13■□□□□ 0.97
CHCHD3-203ENST00000448878 MFSD6Q6ZSS7 791 aa21.13■□□□□ 0.97
CHCHD3-203ENST00000448878 C7orf31Q8N865 590 aa21.13■□□□□ 0.97
CHCHD3-203ENST00000448878 CPVLQ9H3G5 476 aa21.13■□□□□ 0.97
CHCHD3-203ENST00000448878 BDP1A6H8Y1 2624 aa21.13■□□□□ 0.97
CHCHD3-203ENST00000448878 FAM86C2PA6NEL3 165 aa21.12■□□□□ 0.97
CHCHD3-203ENST00000448878 MCMDC2Q4G0Z9 681 aa21.12■□□□□ 0.97
CHCHD3-203ENST00000448878 ANKRD45Q5TZF3 282 aa21.12■□□□□ 0.97
CHCHD3-203ENST00000448878 TBC1D5Q92609 795 aa21.12■□□□□ 0.97
CHCHD3-203ENST00000448878 FAM227BQ96M60 508 aa21.12■□□□□ 0.97
CHCHD3-203ENST00000448878 TTC14Q96N46 770 aa21.12■□□□□ 0.97
CHCHD3-203ENST00000448878 TAAR1Q96RJ0 339 aa21.12■□□□□ 0.97
CHCHD3-203ENST00000448878 ZKSCAN3Q9BRR0 538 aa21.12■□□□□ 0.97
CHCHD3-203ENST00000448878 PCDHB15Q9Y5E8 787 aa21.12■□□□□ 0.97
CHCHD3-203ENST00000448878 TRANK1O15050 2925 aa21.12■□□□□ 0.97
CHCHD3-203ENST00000448878 TRIP12Q14669 1992 aaPredicted RBP21.12■□□□□ 0.97
CHCHD3-203ENST00000448878 STXBP2Q15833 593 aa21.11■□□□□ 0.97
CHCHD3-203ENST00000448878 CCDC62Q6P9F0 684 aa21.11■□□□□ 0.97
CHCHD3-203ENST00000448878 KHSRPQ92945 711 aaKnown RBP eCLIP21.11■□□□□ 0.971e-6■■■□□ 15.2
CHCHD3-203ENST00000448878 HDAC6Q9UBN7 1215 aa21.11■□□□□ 0.97
CHCHD3-203ENST00000448878 DHX16O60231 1041 aaKnown RBP21.1■□□□□ 0.97
CHCHD3-203ENST00000448878 PARNO95453 639 aaKnown RBP21.1■□□□□ 0.97
CHCHD3-203ENST00000448878 HSPD1P10809 573 aaKnown RBP21.1■□□□□ 0.97
CHCHD3-203ENST00000448878 CKBP12277 381 aa21.1■□□□□ 0.97
CHCHD3-203ENST00000448878 IKBKEQ14164 716 aa21.1■□□□□ 0.97
CHCHD3-203ENST00000448878 GPNMBQ14956 572 aa21.1■□□□□ 0.97
CHCHD3-203ENST00000448878 DGKDQ16760 1214 aa21.1■□□□□ 0.97
CHCHD3-203ENST00000448878 GPATCH4Q5T3I0 446 aaKnown RBP21.1■□□□□ 0.97
CHCHD3-203ENST00000448878 NSUN6Q8TEA1 469 aaKnown RBP21.1■□□□□ 0.97
CHCHD3-203ENST00000448878 DHX38Q92620 1227 aaKnown RBP21.1■□□□□ 0.97
CHCHD3-203ENST00000448878 TGS1Q96RS0 853 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms