RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 PRAMEF19Q5SWL8 479 aa16.32■□□□□ 0.2
SREBF1-207ENST00000447641 LHX8Q68G74 356 aa16.32■□□□□ 0.2
SREBF1-207ENST00000447641 DNERQ8NFT8 737 aa16.32■□□□□ 0.2
SREBF1-207ENST00000447641 SYTL5Q8TDW5 730 aaPredicted RBP16.32■□□□□ 0.2
SREBF1-207ENST00000447641 PIBF1Q8WXW3 757 aa16.32■□□□□ 0.2
SREBF1-207ENST00000447641 LARP6Q9BRS8 491 aaKnown RBP16.32■□□□□ 0.2
SREBF1-207ENST00000447641 KATNBL1Q9H079 304 aa16.32■□□□□ 0.2
SREBF1-207ENST00000447641 COL20A1Q9P218 1284 aa16.32■□□□□ 0.2
SREBF1-207ENST00000447641 SEC63Q9UGP8 760 aaKnown RBP16.32■□□□□ 0.2
SREBF1-207ENST00000447641 TPCN1Q9ULQ1 816 aa16.32■□□□□ 0.2
SREBF1-207ENST00000447641 V9GY48 417 aaPredicted RBP16.32■□□□□ 0.2
SREBF1-207ENST00000447641 hCG_1642624A0A1W2PR95 340 aa16.31■□□□□ 0.2
SREBF1-207ENST00000447641 ASB14A6NK59 587 aa16.31■□□□□ 0.2
SREBF1-207ENST00000447641 IFNAR1P17181 557 aa16.31■□□□□ 0.2
SREBF1-207ENST00000447641 EDNRBP24530 442 aa16.31■□□□□ 0.2
SREBF1-207ENST00000447641 CALML3P27482 149 aa16.31■□□□□ 0.2
SREBF1-207ENST00000447641 ARMCX2Q7L311 632 aa16.31■□□□□ 0.2
SREBF1-207ENST00000447641 COL25A1Q9BXS0 654 aaPredicted RBP16.31■□□□□ 0.2
SREBF1-207ENST00000447641 UBE2OQ9C0C9 1292 aaKnown RBP16.31■□□□□ 0.2
SREBF1-207ENST00000447641 NCOA5Q9HCD5 579 aaKnown RBP16.31■□□□□ 0.2
SREBF1-207ENST00000447641 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.31■□□□□ 0.2
SREBF1-207ENST00000447641 ADD3Q9UEY8 706 aaKnown RBP16.31■□□□□ 0.2
SREBF1-207ENST00000447641 NAP1L2Q9ULW6 460 aaPredicted RBP16.31■□□□□ 0.2
SREBF1-207ENST00000447641 SEPT4O43236 478 aa16.3■□□□□ 0.2
SREBF1-207ENST00000447641 PRPF3O43395 683 aaKnown RBP16.3■□□□□ 0.2
SREBF1-207ENST00000447641 ALDH5A1P51649 535 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-207ENST00000447641 TBC1D32Q96NH3 1257 aa16.3■□□□□ 0.2
SREBF1-207ENST00000447641 GUCD1Q96NT3 240 aa16.3■□□□□ 0.2
SREBF1-207ENST00000447641 ABHD16BQ9H3Z7 469 aa16.3■□□□□ 0.2
SREBF1-207ENST00000447641 DAXXQ9UER7 740 aaPredicted RBP16.3■□□□□ 0.2
SREBF1-207ENST00000447641 LRRC37A2A6NM11 1700 aa16.29■□□□□ 0.2
SREBF1-207ENST00000447641 PIK3CDO00329 1044 aa16.29■□□□□ 0.2
SREBF1-207ENST00000447641 PFKFB2O60825 505 aa16.29■□□□□ 0.2
SREBF1-207ENST00000447641 CFBP00751 764 aa16.29■□□□□ 0.2
SREBF1-207ENST00000447641 CCT2P78371 535 aaKnown RBP16.29■□□□□ 0.2
SREBF1-207ENST00000447641 ACVR2BQ13705 512 aa16.29■□□□□ 0.2
SREBF1-207ENST00000447641 PKN1Q16512 942 aa16.29■□□□□ 0.2
SREBF1-207ENST00000447641 TEX2Q8IWB9 1127 aa16.29■□□□□ 0.2
SREBF1-207ENST00000447641 TAAR1Q96RJ0 339 aa16.29■□□□□ 0.2
SREBF1-207ENST00000447641 DDX20Q9UHI6 824 aaKnown RBP16.29■□□□□ 0.2
SREBF1-207ENST00000447641 CNPY2Q9Y2B0 182 aa16.29■□□□□ 0.2
SREBF1-207ENST00000447641 GCOM1H8Y6P7 765 aaPredicted RBP16.28■□□□□ 0.2
SREBF1-207ENST00000447641 hCG_1984214I3L0E3 225 aa16.28■□□□□ 0.2
SREBF1-207ENST00000447641 MEIS2O14770 477 aa16.28■□□□□ 0.2
SREBF1-207ENST00000447641 MSCO60682 206 aa16.28■□□□□ 0.2
SREBF1-207ENST00000447641 POLR2MP0CAP2 368 aa16.28■□□□□ 0.2
SREBF1-207ENST00000447641 MDM2Q00987 491 aaPredicted RBP16.28■□□□□ 0.2
SREBF1-207ENST00000447641 SCRN1Q12765 414 aa16.28■□□□□ 0.2
SREBF1-207ENST00000447641 PFKFB3Q16875 520 aaPredicted RBP16.28■□□□□ 0.2
SREBF1-207ENST00000447641 WWC2Q6AWC2 1192 aa16.28■□□□□ 0.2
SREBF1-207ENST00000447641 TYW1BQ6NUM6 668 aa16.28■□□□□ 0.2
SREBF1-207ENST00000447641 ZNF713Q8N859 430 aaPredicted RBP16.28■□□□□ 0.2
SREBF1-207ENST00000447641 NSUN6Q8TEA1 469 aaKnown RBP16.28■□□□□ 0.2
SREBF1-207ENST00000447641 IWS1Q96ST2 819 aa16.28■□□□□ 0.2
SREBF1-207ENST00000447641 RNF26Q9BY78 433 aaPredicted RBP16.28■□□□□ 0.2
SREBF1-207ENST00000447641 BARHL2Q9NY43 387 aa16.28■□□□□ 0.2
SREBF1-207ENST00000447641 DDX49Q9Y6V7 483 aaKnown RBP16.28■□□□□ 0.2
SREBF1-207ENST00000447641 STXBP3O00186 592 aa16.27■□□□□ 0.2
SREBF1-207ENST00000447641 SCG2P13521 617 aa16.27■□□□□ 0.2
SREBF1-207ENST00000447641 HOXA13P31271 388 aaPredicted RBP16.27■□□□□ 0.2
SREBF1-207ENST00000447641 BECN1Q14457 450 aa16.27■□□□□ 0.2
SREBF1-207ENST00000447641 ME3Q16798 604 aa16.27■□□□□ 0.2
SREBF1-207ENST00000447641 TAPT1Q6NXT6 567 aa16.27■□□□□ 0.2
SREBF1-207ENST00000447641 GPKOWQ92917 476 aaPredicted RBP eCLIP16.27■□□□□ 0.25e-7■■■■□ 23.9
SREBF1-207ENST00000447641 PHKBQ93100 1093 aa16.27■□□□□ 0.2
SREBF1-207ENST00000447641 RMDN3Q96TC7 470 aa16.27■□□□□ 0.2
SREBF1-207ENST00000447641 PSTPIP2Q9H939 334 aa16.27■□□□□ 0.2
SREBF1-207ENST00000447641 FRMPD4Q14CM0 1322 aa16.26■□□□□ 0.19
SREBF1-207ENST00000447641 RBM47A0AV96 593 aaKnown RBP16.26■□□□□ 0.19
SREBF1-207ENST00000447641 CNGA1P29973 690 aa16.26■□□□□ 0.19
SREBF1-207ENST00000447641 STK3Q13188 491 aa16.26■□□□□ 0.19
SREBF1-207ENST00000447641 RABEP1Q15276 862 aa16.26■□□□□ 0.19
SREBF1-207ENST00000447641 PPP1R18Q6NYC8 613 aa16.26■□□□□ 0.19
SREBF1-207ENST00000447641 HEATR3Q7Z4Q2 680 aa16.26■□□□□ 0.19
SREBF1-207ENST00000447641 SLKQ9H2G2 1235 aaPredicted RBP16.26■□□□□ 0.19
SREBF1-207ENST00000447641 VTA1Q9NP79 307 aa16.26■□□□□ 0.19
SREBF1-207ENST00000447641 PXMP2Q9NR77 195 aa16.26■□□□□ 0.19
SREBF1-207ENST00000447641 FAM184BQ9ULE4 1060 aa16.26■□□□□ 0.19
SREBF1-207ENST00000447641 KIAA1217Q5T5P2 1943 aa16.25■□□□□ 0.19
SREBF1-207ENST00000447641 B4DLN1 442 aa16.25■□□□□ 0.19
SREBF1-207ENST00000447641 ADCY6O43306 1168 aa16.25■□□□□ 0.19
SREBF1-207ENST00000447641 LARGE1O95461 756 aa16.25■□□□□ 0.19
SREBF1-207ENST00000447641 CTDNEP1O95476 244 aa16.25■□□□□ 0.19
SREBF1-207ENST00000447641 AKR1A1P14550 325 aa16.25■□□□□ 0.19
SREBF1-207ENST00000447641 MRPL12P52815 198 aaKnown RBP16.25■□□□□ 0.19
SREBF1-207ENST00000447641 NKX3-2P78367 333 aa16.25■□□□□ 0.19
SREBF1-207ENST00000447641 CCDC144BQ3MJ40 725 aa16.25■□□□□ 0.19
SREBF1-207ENST00000447641 USP17L6PQ6QN14 398 aa16.25■□□□□ 0.19
SREBF1-207ENST00000447641 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.25■□□□□ 0.19
SREBF1-207ENST00000447641 RIC8AQ9NPQ8 531 aa16.25■□□□□ 0.19
SREBF1-207ENST00000447641 LIMCH1Q9UPQ0 1083 aa16.25■□□□□ 0.19
SREBF1-207ENST00000447641 ESYT2A0FGR8 921 aa16.24■□□□□ 0.19
SREBF1-207ENST00000447641 NR3C2P08235 984 aa16.24■□□□□ 0.19
SREBF1-207ENST00000447641 PDE4DQ08499 809 aa16.24■□□□□ 0.19
SREBF1-207ENST00000447641 SSRP1Q08945 709 aaKnown RBP16.24■□□□□ 0.19
SREBF1-207ENST00000447641 ARHGEF16Q5VV41 709 aa16.24■□□□□ 0.19
SREBF1-207ENST00000447641 IQSEC1Q6DN90 963 aa16.24■□□□□ 0.19
SREBF1-207ENST00000447641 VSIG10LQ86VR7 867 aa16.24■□□□□ 0.19
SREBF1-207ENST00000447641 GTF3C6Q969F1 213 aa16.24■□□□□ 0.19
SREBF1-207ENST00000447641 MPHOSPH6Q99547 160 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms