RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 MMGT1Q8N4V1 131 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 INPP5DQ92835 1189 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 CAPZA3Q96KX2 299 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 GSDMAQ96QA5 445 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 OLFM1Q99784 485 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 KCNF1Q9H3M0 494 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 TAF1DQ9H5J8 278 aaPredicted RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 DNAAF2Q9NVR5 837 aaKnown RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 MROH7-TTC4A0A0A0MT08 1334 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 PDS5AQ29RF7 1337 aaKnown RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 MYH6P13533 1939 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 CENPBD1B2RD01 187 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 KDM6AO15550 1401 aaPredicted RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 CYP11B2P19099 503 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 SYKP43405 635 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 NT5C2P49902 561 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 CCNHP51946 323 aaPredicted RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 CCT2P78371 535 aaKnown RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 ARHGEF18Q6ZSZ5 1173 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 MPNDQ8N594 471 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 GRPEL2Q8TAA5 225 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 PARD3BQ8TEW8 1205 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 XPO4Q9C0E2 1151 aaKnown RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 EPB41L1Q9H4G0 881 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 CNPY2Q9Y2B0 182 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 LRRC42Q9Y546 428 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 FCHSD2O94868 740 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 LCA5LO95447 670 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 VCLP18206 1134 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 CETN2P41208 172 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 COL19A1Q14993 1142 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 FOXD4L6Q3SYB3 417 aaPredicted RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 C1QTNF12Q5T7M4 302 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 FOXD4L3Q6VB84 417 aaPredicted RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 SUN5Q8TC36 379 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 CYFIP2Q96F07 1278 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 FOXP3Q9BZS1 431 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 NACA2Q9H009 215 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 AP4S1Q9Y587 144 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 ATP4AP20648 1035 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 MLH1P40692 756 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 PLEKHM2Q8IWE5 1019 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 VPS52Q8N1B4 723 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 RAB3IL1Q8TBN0 382 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 TMEM98Q9Y2Y6 226 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 TOMM70O94826 608 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 APOEP02649 317 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 DNM1Q05193 864 aaKnown RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 MAPRE2Q15555 327 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 TBC1D25Q3MII6 688 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 ZMYM1Q5SVZ6 1142 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 GET4Q7L5D6 327 aaPredicted RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 RASGRP2Q7LDG7 609 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 AOPEPQ8N6M6 819 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 SSH1Q8WYL5 1049 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 DGCR14Q96DF8 476 aaKnown RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 SIKE1Q9BRV8 207 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 RNPEPL1Q9HAU8 725 aa3.18□□□□□ -1.9
CHD9-203ENST00000447540 HBS1LQ9Y450 684 aaKnown RBP3.18□□□□□ -1.9
CHD9-203ENST00000447540 CROCCQ5TZA2 2017 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 ARPC4-TTLL3A0A0A6YYG9 625 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 POTEB3A0JP26 581 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 ATP2A1O14983 1001 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 PAEPP09466 180 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 PRR29P0C7W0 189 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 KRT5P13647 590 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 POTEBQ6S5H4 581 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 C17orf53Q8N3J3 647 aaPredicted RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 LRRC27Q9C0I9 530 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 KIF17Q9P2E2 1029 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 TTLL3Q9Y4R7 772 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 PITPNM2Q9BZ72 1349 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 GOLGA8QA0A0J9YX86 632 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 GOLGA8OA6NCC3 632 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 GOLGA8NF8WBI6 632 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 KRT3P12035 628 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 PPP2R2AP63151 447 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 MED21Q13503 144 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 EP400NLQ6ZTU2 488 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 TRPM8Q7Z2W7 1104 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 HDDC2Q7Z4H3 204 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 RILPL2Q969X0 211 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 PHACTR1Q9C0D0 580 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 CARD9Q9H257 536 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 ARL2BPQ9Y2Y0 163 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 MAPK13O15264 365 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 CTNND1O60716 968 aaKnown RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 ALDH1B1P30837 517 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 KRT71Q3SY84 523 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 LINC00299Q6ZSB3 139 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.17□□□□□ -1.9
CHD9-203ENST00000447540 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.17□□□□□ -1.9
CHD9-203ENST00000447540 AIPL1Q9NZN9 384 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 LCMT1Q9UIC8 334 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 RABGEF1Q9UJ41 708 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 C2CD2Q9Y426 696 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 RTEL1-TNFRSF6BF6WH68 1400 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 ITIH6Q6UXX5 1313 aa3.17□□□□□ -1.9
CHD9-203ENST00000447540 FANCD2Q9BXW9 1451 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms