RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 STK17AQ9UEE5 414 aa21.21■□□□□ 0.99
SDCBP-204ENST00000447182 GOLGA6BA6NDN3 693 aa21.2■□□□□ 0.98
SDCBP-204ENST00000447182 SMCO2A6NFE2 343 aa21.2■□□□□ 0.98
SDCBP-204ENST00000447182 PJA2O43164 708 aa21.2■□□□□ 0.98
SDCBP-204ENST00000447182 FGFR1OPO95684 399 aaKnown RBP21.2■□□□□ 0.98
SDCBP-204ENST00000447182 TECP42680 631 aa21.2■□□□□ 0.98
SDCBP-204ENST00000447182 FOXR2Q6PJQ5 311 aa21.2■□□□□ 0.98
SDCBP-204ENST00000447182 UNC13DQ70J99 1090 aa21.2■□□□□ 0.98
SDCBP-204ENST00000447182 SV2BQ7L1I2 683 aa21.2■□□□□ 0.98
SDCBP-204ENST00000447182 SPATA4Q8NEY3 305 aa21.2■□□□□ 0.98
SDCBP-204ENST00000447182 STX8Q9UNK0 236 aa21.2■□□□□ 0.98
SDCBP-204ENST00000447182 LDHBP07195 334 aaKnown RBP21.2■□□□□ 0.98
SDCBP-204ENST00000447182 GUF1Q8N442 669 aaKnown RBP21.2■□□□□ 0.98
SDCBP-204ENST00000447182 FAM76AQ8TAV0 307 aa21.2■□□□□ 0.98
SDCBP-204ENST00000447182 WDR66Q8TBY9 1149 aa21.2■□□□□ 0.98
SDCBP-204ENST00000447182 SMCR8Q8TEV9 937 aaPredicted RBP21.2■□□□□ 0.98
SDCBP-204ENST00000447182 GDAP1L1Q96MZ0 367 aa21.2■□□□□ 0.98
SDCBP-204ENST00000447182 ALS2CR12Q96Q35 445 aa21.2■□□□□ 0.98
SDCBP-204ENST00000447182 OSBPL9Q96SU4 736 aa21.2■□□□□ 0.98
SDCBP-204ENST00000447182 RSPH14Q9UHP6 348 aa21.2■□□□□ 0.98
SDCBP-204ENST00000447182 HYOU1Q9Y4L1 999 aa21.2■□□□□ 0.98
SDCBP-204ENST00000447182 BAG3O95817 575 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 EIF4A3P38919 411 aaKnown RBP21.19■□□□□ 0.98
SDCBP-204ENST00000447182 MAGEA9P43362 315 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 GSTO1P78417 241 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 LRRC63Q05C16 580 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 ARHGAP27Q6ZUM4 889 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 LINC00116Q8NCU8 138 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 EDEM3Q9BZQ6 932 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 ZNF287Q9HBT7 754 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 SLC39A2Q9NP94 309 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 BLOC1S4Q9NUP1 217 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 MYH10P35580 1976 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 ESYT2A0FGR8 921 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 EPHB6O15197 1021 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 GOLGA8HP0CJ92 632 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 CORO7P57737 925 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 GRB10Q13322 594 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 BICDL1Q6ZP65 573 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 RRP36Q96EU6 259 aaKnown RBP21.19■□□□□ 0.98
SDCBP-204ENST00000447182 LRRC1Q9BTT6 524 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 MLXIPQ9HAP2 919 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 JAG2Q9Y219 1238 aa21.19■□□□□ 0.98
SDCBP-204ENST00000447182 COL24A1Q17RW2 1714 aa21.18■□□□□ 0.98
SDCBP-204ENST00000447182 MOCS3O95396 460 aa21.18■□□□□ 0.98
SDCBP-204ENST00000447182 TNFRSF8P28908 595 aa21.18■□□□□ 0.98
SDCBP-204ENST00000447182 CCDC155Q8N6L0 562 aa21.18■□□□□ 0.98
SDCBP-204ENST00000447182 SLC44A5Q8NCS7 719 aa21.18■□□□□ 0.98
SDCBP-204ENST00000447182 TBCKQ8TEA7 893 aa21.18■□□□□ 0.98
SDCBP-204ENST00000447182 HPS3Q969F9 1004 aa21.18■□□□□ 0.98
SDCBP-204ENST00000447182 MTMR9Q96QG7 549 aa21.18■□□□□ 0.98
SDCBP-204ENST00000447182 SH3GL2Q99962 352 aa21.18■□□□□ 0.98
SDCBP-204ENST00000447182 DEF6Q9H4E7 631 aa21.18■□□□□ 0.98
SDCBP-204ENST00000447182 FAM207AQ9NSI2 230 aaPredicted RBP21.18■□□□□ 0.98
SDCBP-204ENST00000447182 GOLGA6CA6NDK9 693 aa21.17■□□□□ 0.98
SDCBP-204ENST00000447182 MYMKA6NI61 221 aa21.17■□□□□ 0.98
SDCBP-204ENST00000447182 GOLGA6DP0CG33 693 aa21.17■□□□□ 0.98
SDCBP-204ENST00000447182 FXR2P51116 673 aaKnown RBP eCLIP21.17■□□□□ 0.98
SDCBP-204ENST00000447182 BAP1Q92560 729 aa21.17■□□□□ 0.98
SDCBP-204ENST00000447182 GOLGA6AQ9NYA3 693 aa21.17■□□□□ 0.98
SDCBP-204ENST00000447182 DMGDHQ9UI17 866 aaKnown RBP21.17■□□□□ 0.98
SDCBP-204ENST00000447182 AKR1B10O60218 316 aa21.17■□□□□ 0.98
SDCBP-204ENST00000447182 MAPK8IP2Q13387 824 aaPredicted RBP21.17■□□□□ 0.98
SDCBP-204ENST00000447182 ASTE1Q2TB18 679 aaPredicted RBP21.17■□□□□ 0.98
SDCBP-204ENST00000447182 SOGA3Q5TF21 947 aa21.17■□□□□ 0.98
SDCBP-204ENST00000447182 EMBQ6PCB8 327 aa21.17■□□□□ 0.98
SDCBP-204ENST00000447182 POTEDQ86YR6 584 aa21.17■□□□□ 0.98
SDCBP-204ENST00000447182 TGFBRAP1Q8WUH2 860 aa21.17■□□□□ 0.98
SDCBP-204ENST00000447182 MTMR7Q9Y216 660 aa21.17■□□□□ 0.98
SDCBP-204ENST00000447182 NRAPQ86VF7 1730 aa21.16■□□□□ 0.98
SDCBP-204ENST00000447182 SNED1Q8TER0 1413 aa21.16■□□□□ 0.98
SDCBP-204ENST00000447182 SSU72P8A0A1W2PR75 194 aa21.16■□□□□ 0.98
SDCBP-204ENST00000447182 LRRC53A6NM62 1247 aa21.16■□□□□ 0.98
SDCBP-204ENST00000447182 EPHB4P54760 987 aa21.16■□□□□ 0.98
SDCBP-204ENST00000447182 SF3B2Q13435 895 aaKnown RBP21.16■□□□□ 0.98
SDCBP-204ENST00000447182 EZH2Q15910 746 aaKnown RBP21.16■□□□□ 0.98
SDCBP-204ENST00000447182 SND1Q7KZF4 910 aaKnown RBP eCLIP21.16■□□□□ 0.983e-10■■■□□ 16.4
SDCBP-204ENST00000447182 REXO1Q8N1G1 1221 aaKnown RBP21.16■□□□□ 0.98
SDCBP-204ENST00000447182 HDAC7Q8WUI4 952 aa21.16■□□□□ 0.98
SDCBP-204ENST00000447182 LARP4BQ92615 738 aaKnown RBP21.16■□□□□ 0.98
SDCBP-204ENST00000447182 MMRN2Q9H8L6 949 aa21.16■□□□□ 0.98
SDCBP-204ENST00000447182 SEC63Q9UGP8 760 aaKnown RBP21.16■□□□□ 0.98
SDCBP-204ENST00000447182 CNTNAP4Q9C0A0 1308 aa21.16■□□□□ 0.98
SDCBP-204ENST00000447182 GOLGA8KD6RF30 607 aa21.16■□□□□ 0.98
SDCBP-204ENST00000447182 DNAJC21Q5F1R6 531 aaKnown RBP21.16■□□□□ 0.98
SDCBP-204ENST00000447182 GBP6Q6ZN66 633 aa21.16■□□□□ 0.98
SDCBP-204ENST00000447182 LRRC55Q6ZSA7 311 aa21.16■□□□□ 0.98
SDCBP-204ENST00000447182 CERS3Q8IU89 383 aa21.16■□□□□ 0.98
SDCBP-204ENST00000447182 RNF10Q8N5U6 811 aaKnown RBP21.16■□□□□ 0.98
SDCBP-204ENST00000447182 NEDD1Q8NHV4 660 aa21.16■□□□□ 0.98
SDCBP-204ENST00000447182 PNMA5Q96PV4 448 aa21.16■□□□□ 0.98
SDCBP-204ENST00000447182 CPVLQ9H3G5 476 aa21.16■□□□□ 0.98
SDCBP-204ENST00000447182 STIM2Q9P246 746 aa21.16■□□□□ 0.98
SDCBP-204ENST00000447182 hCG_1984214I3L0E3 225 aa21.15■□□□□ 0.98
SDCBP-204ENST00000447182 EPB41P11171 864 aaKnown RBP21.15■□□□□ 0.98
SDCBP-204ENST00000447182 TM4SF1P30408 202 aa21.15■□□□□ 0.98
SDCBP-204ENST00000447182 MAGEA1P43355 309 aa21.15■□□□□ 0.98
SDCBP-204ENST00000447182 EHHADHQ08426 723 aa21.15■□□□□ 0.98
SDCBP-204ENST00000447182 PPFIA1Q13136 1202 aa21.15■□□□□ 0.98
SDCBP-204ENST00000447182 PSMD2Q13200 908 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms