RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 NOC4LQ9BVI4 516 aaKnown RBP21.23■□□□□ 0.99
COL9A1-205ENST00000447041 ALDH8A1Q9H2A2 487 aaPredicted RBP21.23■□□□□ 0.99
COL9A1-205ENST00000447041 TXNP10599 105 aaKnown RBP21.22■□□□□ 0.99
COL9A1-205ENST00000447041 RASIP1Q5U651 963 aa21.22■□□□□ 0.99
COL9A1-205ENST00000447041 PPP1R13LQ8WUF5 828 aa21.22■□□□□ 0.99
COL9A1-205ENST00000447041 MTG1Q9BT17 334 aaPredicted RBP21.22■□□□□ 0.99
COL9A1-205ENST00000447041 WNT8AQ9H1J5 351 aa21.22■□□□□ 0.99
COL9A1-205ENST00000447041 IL23AQ9NPF7 189 aa21.22■□□□□ 0.99
COL9A1-205ENST00000447041 TRMT13Q9NUP7 481 aaKnown RBP21.22■□□□□ 0.99
COL9A1-205ENST00000447041 MAD2L2Q9UI95 211 aa21.22■□□□□ 0.99
COL9A1-205ENST00000447041 MRPL11Q9Y3B7 192 aaKnown RBP21.22■□□□□ 0.99
COL9A1-205ENST00000447041 SCN10AQ9Y5Y9 1956 aa21.22■□□□□ 0.99
COL9A1-205ENST00000447041 KIAA1217Q5T5P2 1943 aa21.21■□□□□ 0.99
COL9A1-205ENST00000447041 TMEM265A0A087WTH1 108 aa21.21■□□□□ 0.99
COL9A1-205ENST00000447041 B4DLN1 442 aa21.21■□□□□ 0.99
COL9A1-205ENST00000447041 DLL1O00548 723 aa21.21■□□□□ 0.99
COL9A1-205ENST00000447041 MRPL12P52815 198 aaKnown RBP21.21■□□□□ 0.99
COL9A1-205ENST00000447041 TRDNQ13061 729 aa21.21■□□□□ 0.99
COL9A1-205ENST00000447041 TTLL4Q14679 1199 aa21.21■□□□□ 0.99
COL9A1-205ENST00000447041 MCF2L2Q86YR7 1114 aa21.21■□□□□ 0.99
COL9A1-205ENST00000447041 SENP2Q9HC62 589 aa21.21■□□□□ 0.99
COL9A1-205ENST00000447041 A6NJR5 290 aa21.2■□□□□ 0.98
COL9A1-205ENST00000447041 GRXCR1A8MXD5 290 aa21.2■□□□□ 0.98
COL9A1-205ENST00000447041 KLRF2D3W0D1 207 aa21.2■□□□□ 0.98
COL9A1-205ENST00000447041 OPLAHO14841 1288 aa21.2■□□□□ 0.98
COL9A1-205ENST00000447041 SGSM2O43147 1006 aa21.2■□□□□ 0.98
COL9A1-205ENST00000447041 PPP1R11O60927 126 aaPredicted RBP21.2■□□□□ 0.98
COL9A1-205ENST00000447041 PBX2P40425 430 aa21.2■□□□□ 0.98
COL9A1-205ENST00000447041 STOX1Q6ZVD7 989 aa21.2■□□□□ 0.98
COL9A1-205ENST00000447041 NSUN6Q8TEA1 469 aaKnown RBP21.2■□□□□ 0.98
COL9A1-205ENST00000447041 MTMR8Q96EF0 704 aa21.2■□□□□ 0.98
COL9A1-205ENST00000447041 RMDN3Q96TC7 470 aa21.2■□□□□ 0.98
COL9A1-205ENST00000447041 MAF1Q9H063 256 aa21.2■□□□□ 0.98
COL9A1-205ENST00000447041 GPHNQ9NQX3 736 aaPredicted RBP21.2■□□□□ 0.98
COL9A1-205ENST00000447041 CXXC1Q9P0U4 656 aaPredicted RBP21.2■□□□□ 0.98
COL9A1-205ENST00000447041 U3KPZ7 1027 aaPredicted RBP21.2■□□□□ 0.98
COL9A1-205ENST00000447041 PALM3A6NDB9 673 aaPredicted RBP21.19■□□□□ 0.98
COL9A1-205ENST00000447041 CFBP00751 764 aa21.19■□□□□ 0.98
COL9A1-205ENST00000447041 CYP2C9P11712 490 aa21.19■□□□□ 0.98
COL9A1-205ENST00000447041 EIF2AK2P19525 551 aaKnown RBP21.19■□□□□ 0.98
COL9A1-205ENST00000447041 SLC35G1Q2M3R5 365 aa21.19■□□□□ 0.98
COL9A1-205ENST00000447041 NBPF20Q3BBV1 942 aa21.19■□□□□ 0.98
COL9A1-205ENST00000447041 BRDTQ58F21 947 aaPredicted RBP21.19■□□□□ 0.98
COL9A1-205ENST00000447041 FAM47CQ5HY64 1035 aa21.19■□□□□ 0.98
COL9A1-205ENST00000447041 CCDC62Q6P9F0 684 aa21.19■□□□□ 0.98
COL9A1-205ENST00000447041 SEPT14Q6ZU15 432 aa21.19■□□□□ 0.98
COL9A1-205ENST00000447041 CHST3Q7LGC8 479 aa21.19■□□□□ 0.98
COL9A1-205ENST00000447041 MAFAQ8NHW3 353 aaPredicted RBP21.19■□□□□ 0.98
COL9A1-205ENST00000447041 TIFAQ96CG3 184 aa21.19■□□□□ 0.98
COL9A1-205ENST00000447041 SCLYQ96I15 445 aa21.19■□□□□ 0.98
COL9A1-205ENST00000447041 AMNQ9BXJ7 453 aa21.19■□□□□ 0.98
COL9A1-205ENST00000447041 PBX4Q9BYU1 374 aa21.19■□□□□ 0.98
COL9A1-205ENST00000447041 GBF1Q92538 1859 aa21.19■□□□□ 0.98
COL9A1-205ENST00000447041 TANC1Q9C0D5 1861 aa21.18■□□□□ 0.98
COL9A1-205ENST00000447041 E7EWF7 191 aa21.18■□□□□ 0.98
COL9A1-205ENST00000447041 IFIT3O14879 490 aaKnown RBP21.18■□□□□ 0.98
COL9A1-205ENST00000447041 FOSL2P15408 326 aa21.18■□□□□ 0.98
COL9A1-205ENST00000447041 GRIN2CQ14957 1233 aa21.18■□□□□ 0.98
COL9A1-205ENST00000447041 LY6KQ17RY6 165 aa21.18■□□□□ 0.98
COL9A1-205ENST00000447041 ARHGEF16Q5VV41 709 aa21.18■□□□□ 0.98
COL9A1-205ENST00000447041 HOMER1Q86YM7 354 aa21.18■□□□□ 0.98
COL9A1-205ENST00000447041 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.18■□□□□ 0.98
COL9A1-205ENST00000447041 HERVK_113Q902F9 699 aa21.18■□□□□ 0.98
COL9A1-205ENST00000447041 PXMP2Q9NR77 195 aa21.18■□□□□ 0.98
COL9A1-205ENST00000447041 ZBTB5O15062 677 aa21.17■□□□□ 0.98
COL9A1-205ENST00000447041 HSD17B4P51659 736 aa21.17■□□□□ 0.98
COL9A1-205ENST00000447041 GRM4Q14833 912 aa21.17■□□□□ 0.98
COL9A1-205ENST00000447041 STXBP2Q15833 593 aa21.17■□□□□ 0.98
COL9A1-205ENST00000447041 OTOP2Q7RTS6 562 aa21.17■□□□□ 0.98
COL9A1-205ENST00000447041 RALYLQ86SE5 291 aaKnown RBP21.17■□□□□ 0.98
COL9A1-205ENST00000447041 NCOA7Q8NI08 942 aa21.17■□□□□ 0.98
COL9A1-205ENST00000447041 VWCEQ96DN2 955 aa21.17■□□□□ 0.98
COL9A1-205ENST00000447041 IWS1Q96ST2 819 aa21.17■□□□□ 0.98
COL9A1-205ENST00000447041 SCN5AQ14524 2016 aa21.17■□□□□ 0.98
COL9A1-205ENST00000447041 KPNA6O60684 536 aa21.16■□□□□ 0.98
COL9A1-205ENST00000447041 FGBP02675 491 aa21.16■□□□□ 0.98
COL9A1-205ENST00000447041 MMP3P08254 477 aa21.16■□□□□ 0.98
COL9A1-205ENST00000447041 SUPT20HL2P0C7V6 817 aa21.16■□□□□ 0.98
COL9A1-205ENST00000447041 GHRHRQ02643 423 aa21.16■□□□□ 0.98
COL9A1-205ENST00000447041 ARHGAP1Q07960 439 aa21.16■□□□□ 0.98
COL9A1-205ENST00000447041 WTAPQ15007 396 aa21.16■□□□□ 0.98
COL9A1-205ENST00000447041 NFRKBQ6P4R8 1299 aa21.16■□□□□ 0.98
COL9A1-205ENST00000447041 AFG1LQ8WV93 481 aa21.16■□□□□ 0.98
COL9A1-205ENST00000447041 PIGSQ96S52 555 aa21.16■□□□□ 0.98
COL9A1-205ENST00000447041 ZNF576Q9H609 170 aa21.16■□□□□ 0.98
COL9A1-205ENST00000447041 A0A0C4DFX4 3053 aa21.15■□□□□ 0.98
COL9A1-205ENST00000447041 ERICH2A1L162 156 aa21.15■□□□□ 0.98
COL9A1-205ENST00000447041 GH1P01241 217 aa21.15■□□□□ 0.98
COL9A1-205ENST00000447041 ANTXR2P58335 489 aa21.15■□□□□ 0.98
COL9A1-205ENST00000447041 CHMP4BP1P59074 171 aa21.15■□□□□ 0.98
COL9A1-205ENST00000447041 TROAPQ12815 778 aa21.15■□□□□ 0.98
COL9A1-205ENST00000447041 MAP4K1Q92918 833 aa21.15■□□□□ 0.98
COL9A1-205ENST00000447041 MTIF3Q9H2K0 278 aaKnown RBP21.15■□□□□ 0.98
COL9A1-205ENST00000447041 PCDHA1Q9Y5I3 950 aa21.15■□□□□ 0.98
COL9A1-205ENST00000447041 RBM8AQ9Y5S9 174 aaKnown RBP21.15■□□□□ 0.98
COL9A1-205ENST00000447041 CYTH3O43739 400 aa21.14■□□□□ 0.97
COL9A1-205ENST00000447041 NR3C2P08235 984 aa21.14■□□□□ 0.97
COL9A1-205ENST00000447041 HOXA13P31271 388 aaPredicted RBP21.14■□□□□ 0.97
COL9A1-205ENST00000447041 MB21D2Q8IYB1 491 aaPredicted RBP21.14■□□□□ 0.97
COL9A1-205ENST00000447041 RIOX1Q9H6W3 641 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms