RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 PDHBP11177 359 aa28.65■■■□□ 2.18
PMS1-214ENST00000446877 POU3F3P20264 500 aaPredicted RBP28.65■■■□□ 2.18
PMS1-214ENST00000446877 CHMP4BP1P59074 171 aa28.65■■■□□ 2.18
PMS1-214ENST00000446877 TFF2Q03403 129 aa28.65■■■□□ 2.18
PMS1-214ENST00000446877 MTCH2Q9Y6C9 303 aa28.65■■■□□ 2.18
PMS1-214ENST00000446877 LRRC37A2A6NM11 1700 aa28.65■■■□□ 2.18
PMS1-214ENST00000446877 PPP1R13LQ8WUF5 828 aa28.64■■■□□ 2.18
PMS1-214ENST00000446877 TTC14Q96N46 770 aa28.64■■■□□ 2.18
PMS1-214ENST00000446877 NECAB3Q96P71 396 aaPredicted RBP28.64■■■□□ 2.18
PMS1-214ENST00000446877 WDR19Q8NEZ3 1342 aa28.64■■■□□ 2.17
PMS1-214ENST00000446877 EDNRBP24530 442 aa28.63■■■□□ 2.17
PMS1-214ENST00000446877 ZNF543Q08ER8 600 aa28.63■■■□□ 2.17
PMS1-214ENST00000446877 MCMDC2Q4G0Z9 681 aa28.63■■■□□ 2.17
PMS1-214ENST00000446877 HERC6Q8IVU3 1022 aa28.63■■■□□ 2.17
PMS1-214ENST00000446877 ARNTL2Q8WYA1 636 aa28.63■■■□□ 2.17
PMS1-214ENST00000446877 COPS5Q92905 334 aa28.63■■■□□ 2.17
PMS1-214ENST00000446877 RAPGEFL1Q9UHV5 662 aa28.63■■■□□ 2.17
PMS1-214ENST00000446877 ANKRD45Q5TZF3 282 aa28.62■■■□□ 2.17
PMS1-214ENST00000446877 C1QTNF1Q9BXJ1 281 aa28.62■■■□□ 2.17
PMS1-214ENST00000446877 MFSD6Q6ZSS7 791 aa28.61■■■□□ 2.17
PMS1-214ENST00000446877 CCDC155Q8N6L0 562 aa28.61■■■□□ 2.17
PMS1-214ENST00000446877 COG5Q9UP83 839 aa28.61■■■□□ 2.17
PMS1-214ENST00000446877 TRANK1O15050 2925 aa28.61■■■□□ 2.17
PMS1-214ENST00000446877 BAIAP3O94812 1187 aa28.6■■■□□ 2.17
PMS1-214ENST00000446877 PCP11498 1178 aaKnown RBP28.6■■■□□ 2.17
PMS1-214ENST00000446877 KCNJ6P48051 423 aa28.6■■■□□ 2.17
PMS1-214ENST00000446877 KCNQ1P51787 676 aa28.6■■■□□ 2.17
PMS1-214ENST00000446877 TAP1Q03518 808 aa28.6■■■□□ 2.17
PMS1-214ENST00000446877 PTGISQ16647 500 aa28.6■■■□□ 2.17
PMS1-214ENST00000446877 RGS22Q8NE09 1264 aa28.6■■■□□ 2.17
PMS1-214ENST00000446877 FAM227BQ96M60 508 aa28.6■■■□□ 2.17
PMS1-214ENST00000446877 SALL3Q9BXA9 1300 aa28.6■■■□□ 2.17
PMS1-214ENST00000446877 HSPD1P10809 573 aaKnown RBP28.59■■■□□ 2.17
PMS1-214ENST00000446877 HAND2P61296 217 aa28.59■■■□□ 2.17
PMS1-214ENST00000446877 USH1GQ495M9 461 aa28.59■■■□□ 2.17
PMS1-214ENST00000446877 GPATCH4Q5T3I0 446 aaKnown RBP28.59■■■□□ 2.17
PMS1-214ENST00000446877 REV3LO60673 3130 aa28.58■■■□□ 2.17
PMS1-214ENST00000446877 TLL1O43897 1013 aa28.58■■■□□ 2.17
PMS1-214ENST00000446877 TICAM2Q86XR7 235 aa28.58■■■□□ 2.17
PMS1-214ENST00000446877 CAGE1Q8TC20 777 aa28.58■■■□□ 2.17
PMS1-214ENST00000446877 GBF1Q92538 1859 aa28.57■■■□□ 2.16
PMS1-214ENST00000446877 A0A0D9SFI3 127 aa28.57■■■□□ 2.16
PMS1-214ENST00000446877 EPOPA6NHQ4 379 aa28.57■■■□□ 2.16
PMS1-214ENST00000446877 SNHG28P0DPA3 235 aa28.57■■■□□ 2.16
PMS1-214ENST00000446877 AFAP1L1Q8TED9 768 aa28.57■■■□□ 2.16
PMS1-214ENST00000446877 AFG1LQ8WV93 481 aa28.57■■■□□ 2.16
PMS1-214ENST00000446877 RNF41Q9H4P4 317 aaPredicted RBP28.57■■■□□ 2.16
PMS1-214ENST00000446877 ARIH2O95376 493 aa28.56■■■□□ 2.16
PMS1-214ENST00000446877 ZMYM6O95789 1325 aa28.56■■■□□ 2.16
PMS1-214ENST00000446877 GH1P01241 217 aa28.56■■■□□ 2.16
PMS1-214ENST00000446877 PDE1AP54750 535 aa28.56■■■□□ 2.16
PMS1-214ENST00000446877 SEPT14Q6ZU15 432 aa28.56■■■□□ 2.16
PMS1-214ENST00000446877 ESR2Q92731 530 aa28.56■■■□□ 2.16
PMS1-214ENST00000446877 ZBED2Q9BTP6 218 aa28.56■■■□□ 2.16
PMS1-214ENST00000446877 MAF1Q9H063 256 aa28.56■■■□□ 2.16
PMS1-214ENST00000446877 GOLGA8HP0CJ92 632 aa28.55■■■□□ 2.16
PMS1-214ENST00000446877 CASTP20810 708 aaKnown RBP28.55■■■□□ 2.16
PMS1-214ENST00000446877 KRT40Q6A162 431 aa28.55■■■□□ 2.16
PMS1-214ENST00000446877 CCDC62Q6P9F0 684 aa28.55■■■□□ 2.16
PMS1-214ENST00000446877 NSUN6Q8TEA1 469 aaKnown RBP28.55■■■□□ 2.16
PMS1-214ENST00000446877 HLA-CQ95604 372 aa28.55■■■□□ 2.16
PMS1-214ENST00000446877 UBA5Q9GZZ9 404 aa28.55■■■□□ 2.16
PMS1-214ENST00000446877 PRRC2BQ5JSZ5 2229 aaKnown RBP28.55■■■□□ 2.16
PMS1-214ENST00000446877 LCTP09848 1927 aa28.55■■■□□ 2.16
PMS1-214ENST00000446877 SELPP16109 830 aa28.54■■■□□ 2.16
PMS1-214ENST00000446877 GRB10Q13322 594 aa28.54■■■□□ 2.16
PMS1-214ENST00000446877 CHST3Q7LGC8 479 aa28.54■■■□□ 2.16
PMS1-214ENST00000446877 FAM122AQ96E09 287 aa28.54■■■□□ 2.16
PMS1-214ENST00000446877 ARHGEF15O94989 841 aa28.53■■■□□ 2.16
PMS1-214ENST00000446877 PARNO95453 639 aaKnown RBP28.53■■■□□ 2.16
PMS1-214ENST00000446877 MMP3P08254 477 aa28.53■■■□□ 2.16
PMS1-214ENST00000446877 NMIQ13287 307 aaPredicted RBP28.53■■■□□ 2.16
PMS1-214ENST00000446877 STXBP2Q15833 593 aa28.53■■■□□ 2.16
PMS1-214ENST00000446877 LY6KQ17RY6 165 aa28.53■■■□□ 2.16
PMS1-214ENST00000446877 ZNF589Q86UQ0 364 aaPredicted RBP28.53■■■□□ 2.16
PMS1-214ENST00000446877 SESTD1Q86VW0 696 aa28.53■■■□□ 2.16
PMS1-214ENST00000446877 DGKHQ86XP1 1220 aa28.53■■■□□ 2.16
PMS1-214ENST00000446877 MCF2L2Q86YR7 1114 aa28.53■■■□□ 2.16
PMS1-214ENST00000446877 SCN10AQ9Y5Y9 1956 aa28.53■■■□□ 2.16
PMS1-214ENST00000446877 ABCB11O95342 1321 aa28.52■■■□□ 2.16
PMS1-214ENST00000446877 CCDC171Q6TFL3 1326 aa28.52■■■□□ 2.16
PMS1-214ENST00000446877 PLA2G5P39877 138 aa28.52■■■□□ 2.16
PMS1-214ENST00000446877 MFAP1P55081 439 aaKnown RBP28.52■■■□□ 2.16
PMS1-214ENST00000446877 CCDC178Q5BJE1 867 aa28.52■■■□□ 2.16
PMS1-214ENST00000446877 GDF6Q6KF10 455 aaPredicted RBP28.52■■■□□ 2.16
PMS1-214ENST00000446877 LRRC8DQ7L1W4 858 aa28.52■■■□□ 2.16
PMS1-214ENST00000446877 IWS1Q96ST2 819 aa28.52■■■□□ 2.16
PMS1-214ENST00000446877 ZKSCAN3Q9BRR0 538 aa28.52■■■□□ 2.16
PMS1-214ENST00000446877 CPVLQ9H3G5 476 aa28.52■■■□□ 2.16
PMS1-214ENST00000446877 TRIM6-TRIM34B2RNG4 842 aa28.51■■■□□ 2.15
PMS1-214ENST00000446877 WDR5P61964 334 aaKnown RBP28.51■■■□□ 2.15
PMS1-214ENST00000446877 ARHGAP1Q07960 439 aa28.51■■■□□ 2.15
PMS1-214ENST00000446877 CDC37Q16543 378 aaPredicted RBP28.51■■■□□ 2.15
PMS1-214ENST00000446877 DGKDQ16760 1214 aa28.51■■■□□ 2.15
PMS1-214ENST00000446877 TBC1D10CQ8IV04 446 aa28.51■■■□□ 2.15
PMS1-214ENST00000446877 C7orf31Q8N865 590 aa28.51■■■□□ 2.15
PMS1-214ENST00000446877 SYTL5Q8TDW5 730 aaPredicted RBP28.51■■■□□ 2.15
PMS1-214ENST00000446877 TBC1D5Q92609 795 aa28.51■■■□□ 2.15
PMS1-214ENST00000446877 TAAR1Q96RJ0 339 aa28.51■■■□□ 2.15
PMS1-214ENST00000446877 RMDN3Q96TC7 470 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms