RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 GMPSP49915 693 aaPredicted RBP10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 USP11P51784 963 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 NR1I3Q14994 352 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 PRR16Q569H4 304 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 BTNL9Q6UXG8 535 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 DYMQ7RTS9 669 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 MICALL2Q8IY33 904 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 ZBED3Q96IU2 234 aaPredicted RBP10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 PNMA5Q96PV4 448 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 P2RX7Q99572 595 aaKnown RBP10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 FEZ1Q99689 392 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 TRIM9Q9C026 710 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 MAGEF1Q9HAY2 307 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 EXOC1Q9NV70 894 aa10.69□□□□□ -0.7
COL6A4P1-201ENST00000446690 TEX33O43247 280 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 CFBP00751 764 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 ARHGAP4P98171 946 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 RBM10P98175 930 aaKnown RBP10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 STIM1Q13586 685 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 KCNB1Q14721 858 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 FILIP1LQ4L180 1135 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 SPECC1LQ69YQ0 1117 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 HPS3Q969F9 1004 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 NAP1L4Q99733 375 aaKnown RBP10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 C7orf25Q9BPX7 421 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 VCPKMTQ9H867 229 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 CNOT7Q9UIV1 285 aaKnown RBP10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 ASTN2O75129 1339 aaPredicted RBP10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 RHOBTB3O94955 611 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 SSBP05455 408 aaKnown RBP eCLIP10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 ASNSP08243 561 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 ZNF76P36508 570 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 ADKP55263 362 aaKnown RBP10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 AP3B2Q13367 1082 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 CDKAL1Q5VV42 579 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 ADSSL1Q8N142 457 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 CHURC1Q8WUH1 139 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 LARP4BQ92615 738 aaKnown RBP10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 CTAGE1Q96RT6 745 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 ZNF341Q9BYN7 854 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 BLOC1S4Q9NUP1 217 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 FBXO28Q9NVF7 368 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 SYNPO2Q9UMS6 1093 aa10.68□□□□□ -0.7
COL6A4P1-201ENST00000446690 A0A1B0GTH6 734 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 FCER1AP12319 257 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 TNNT1P13805 278 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 STAT3P40763 770 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 PMS1P54277 932 aaKnown RBP10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 STK4Q13043 487 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 ECM1Q16610 540 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 GIMAP8Q8ND71 665 aaPredicted RBP10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 CPLX3Q8WVH0 158 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 TBC1D5Q92609 795 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 ZNF592Q92610 1267 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 EEF2KMTQ96G04 330 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 VPS16Q9H269 839 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 SH2D4AQ9H788 454 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 SLC39A2Q9NP94 309 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 PGAP2Q9UHJ9 254 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 CD2APQ9Y5K6 639 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 UQCRHLA0A096LP55 91 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 MYMKA6NI61 221 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 KCNJ18B7U540 433 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 PSMA7O14818 248 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 OPLAHO14841 1288 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 N4BP3O15049 544 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 UQCRHP07919 91 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 IDEP14735 1019 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 TNFAIP1Q13829 316 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 KCNJ12Q14500 433 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 KCNK18Q7Z418 384 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 ANKRD20A12PQ8NF67 263 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 RAD54LQ92698 747 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 TRIM47Q96LD4 638 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 MAP7D2Q96T17 732 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 STK17AQ9UEE5 414 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 ADD3Q9UEY8 706 aaKnown RBP10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 HACL1Q9UJ83 578 aa10.67□□□□□ -0.7
COL6A4P1-201ENST00000446690 FAM86B1E9PN63 330 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 PES1O00541 588 aaKnown RBP10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 FOSP01100 380 aaPredicted RBP10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 FAM86B2P0C5J1 330 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 RPS12P25398 132 aaKnown RBP10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 ZNF280AP59817 542 aaPredicted RBP10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 KRT31Q15323 416 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 TCP11X2Q5H9J9 407 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 APTXQ7Z2E3 356 aaKnown RBP10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 CCAR2Q8N163 923 aaKnown RBP10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 NLGN2Q8NFZ4 835 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 SRRTQ9BXP5 876 aaKnown RBP10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 TAB2Q9NYJ8 693 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 KIAA1024Q9UPX6 916 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 CYP3A7-CYP3A51PA0A087WV96 503 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 PHF20L1A8MW92 1017 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 H7C1D1 291 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 CYP3A7P24462 503 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 PRELPP51888 382 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 UBXN2AP68543 259 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 DGKZQ13574 1117 aa10.66□□□□□ -0.7
COL6A4P1-201ENST00000446690 PTPN14Q15678 1187 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms