RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 TMOD2Q9NZR1 351 aa18.83■□□□□ 0.61
LAPTM4B-201ENST00000445593 PSDA5PKW4 1024 aaPredicted RBP18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 FANCGO15287 622 aa18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 ZBTB7AO95365 584 aa18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 GNG11P61952 73 aa18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 CC2D2BQ6DHV5 1058 aa18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 CCDC174Q6PII3 467 aa18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 SV2BQ7L1I2 683 aa18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 IRF2BP1Q8IU81 584 aa18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 EHD4Q9H223 541 aa18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 B4DLN1 442 aa18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 DLGAP5Q15398 846 aa18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 PRR16Q569H4 304 aa18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 REXO1L1PQ8IX06 675 aa18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 SMAP1Q8IYB5 467 aaPredicted RBP18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 AK8Q96MA6 479 aa18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 CTAGE1Q96RT6 745 aa18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 P2RX7Q99572 595 aaKnown RBP18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 BLOC1S4Q9NUP1 217 aa18.83■□□□□ 0.6
LAPTM4B-201ENST00000445593 MYH4Q9Y623 1939 aa18.82■□□□□ 0.6
LAPTM4B-201ENST00000445593 HMGB2P26583 209 aaKnown RBP18.82■□□□□ 0.6
LAPTM4B-201ENST00000445593 KLK7P49862 253 aa18.82■□□□□ 0.6
LAPTM4B-201ENST00000445593 RAD9BQ6WBX8 426 aa18.82■□□□□ 0.6
LAPTM4B-201ENST00000445593 TMEM179Q6ZVK1 233 aa18.82■□□□□ 0.6
LAPTM4B-201ENST00000445593 OGFOD1Q8N543 542 aa18.82■□□□□ 0.6
LAPTM4B-201ENST00000445593 LARP4BQ92615 738 aaKnown RBP18.82■□□□□ 0.6
LAPTM4B-201ENST00000445593 HAS1Q92839 578 aa18.82■□□□□ 0.6
LAPTM4B-201ENST00000445593 MRPL44Q9H9J2 332 aaKnown RBP18.82■□□□□ 0.6
LAPTM4B-201ENST00000445593 ANKRD40Q6AI12 368 aa18.82■□□□□ 0.6
LAPTM4B-201ENST00000445593 ANO3Q9BYT9 981 aa18.82■□□□□ 0.6
LAPTM4B-201ENST00000445593 PCDHA12Q9UN75 941 aa18.82■□□□□ 0.6
LAPTM4B-201ENST00000445593 ACRBPQ8NEB7 543 aa18.81■□□□□ 0.6
LAPTM4B-201ENST00000445593 MAGEC2Q9UBF1 373 aaPredicted RBP18.81■□□□□ 0.6
LAPTM4B-201ENST00000445593 NPHP3-ACAD11A0A0J9YXS1 232 aa18.81■□□□□ 0.6
LAPTM4B-201ENST00000445593 E9PMD0 336 aa18.81■□□□□ 0.6
LAPTM4B-201ENST00000445593 RHOBTB3O94955 611 aa18.81■□□□□ 0.6
LAPTM4B-201ENST00000445593 ELF2Q15723 593 aa18.81■□□□□ 0.6
LAPTM4B-201ENST00000445593 GIMAP8Q8ND71 665 aaPredicted RBP18.81■□□□□ 0.6
LAPTM4B-201ENST00000445593 CCDC47Q96A33 483 aaKnown RBP18.81■□□□□ 0.6
LAPTM4B-201ENST00000445593 WDR24Q96S15 920 aa18.81■□□□□ 0.6
LAPTM4B-201ENST00000445593 MEIS1O00470 390 aa18.81■□□□□ 0.6
LAPTM4B-201ENST00000445593 KIAA1755Q5JYT7 1200 aa18.81■□□□□ 0.6
LAPTM4B-201ENST00000445593 KIAA0895Q8NCT3 520 aa18.81■□□□□ 0.6
LAPTM4B-201ENST00000445593 ATF5Q9Y2D1 282 aaPredicted RBP18.81■□□□□ 0.6
LAPTM4B-201ENST00000445593 POTEB3A0JP26 581 aa18.8■□□□□ 0.6
LAPTM4B-201ENST00000445593 POTECB2RU33 542 aa18.8■□□□□ 0.6
LAPTM4B-201ENST00000445593 MFAP3LO75121 409 aa18.8■□□□□ 0.6
LAPTM4B-201ENST00000445593 ETF1P62495 437 aaKnown RBP18.8■□□□□ 0.6
LAPTM4B-201ENST00000445593 POTEBQ6S5H4 581 aa18.8■□□□□ 0.6
LAPTM4B-201ENST00000445593 CYP2W1Q8TAV3 490 aa18.8■□□□□ 0.6
LAPTM4B-201ENST00000445593 KIFC2Q96AC6 838 aa18.8■□□□□ 0.6
LAPTM4B-201ENST00000445593 NYAP2Q9P242 653 aa18.8■□□□□ 0.6
LAPTM4B-201ENST00000445593 KIAA1024Q9UPX6 916 aa18.8■□□□□ 0.6
LAPTM4B-201ENST00000445593 SMCHD1A6NHR9 2005 aa18.8■□□□□ 0.6
LAPTM4B-201ENST00000445593 BMP3P12645 472 aa18.8■□□□□ 0.6
LAPTM4B-201ENST00000445593 KRT9P35527 623 aa18.8■□□□□ 0.6
LAPTM4B-201ENST00000445593 MTIF2P46199 727 aaKnown RBP18.8■□□□□ 0.6
LAPTM4B-201ENST00000445593 FAM83BQ5T0W9 1011 aa18.8■□□□□ 0.6
LAPTM4B-201ENST00000445593 PDCL2Q8N4E4 241 aa18.8■□□□□ 0.6
LAPTM4B-201ENST00000445593 TBC1D5Q92609 795 aa18.8■□□□□ 0.6
LAPTM4B-201ENST00000445593 GLIS2Q9BZE0 524 aaPredicted RBP18.8■□□□□ 0.6
LAPTM4B-201ENST00000445593 FOCADQ5VW36 1801 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 SPDYE4A6NLX3 237 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 hCG_1984214I3L0E3 225 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 ZSCAN12O43309 604 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 STX10O60499 249 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 TPM1P09493 284 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 SF3B2Q13435 895 aaKnown RBP18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 CCDC93Q567U6 631 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 TATDN1Q6P1N9 297 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 FBXO11Q86XK2 927 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 ZNF713Q8N859 430 aaPredicted RBP18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 DDX12PQ92771 950 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 RAB34Q9BZG1 259 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 SPDYE2BA6NHP3 402 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 CFBP00751 764 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 SPDYE6P0CI01 402 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 CYP4A11Q02928 519 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 SYDE2Q5VT97 1194 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 RSBN1LQ6PCB5 846 aaPredicted RBP18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 LIMA1Q9UHB6 759 aaKnown RBP18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 TFR2Q9UP52 801 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 ABL1P00519 1130 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 AMPD3Q01432 767 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 TTI2Q6NXR4 508 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 TRIM65Q6PJ69 517 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 P2RX5Q93086 422 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 DUSP9Q99956 384 aaKnown RBP18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 ZSWIM4Q9H7M6 989 aa18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 ZNF70Q9UC06 446 aaPredicted RBP18.79■□□□□ 0.6
LAPTM4B-201ENST00000445593 MYO3BQ8WXR4 1341 aa18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 H7C1D1 291 aa18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 CTIFO43310 598 aaKnown RBP18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 PBX1P40424 430 aa18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 NCAPH2Q6IBW4 605 aa18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 CNOT6LQ96LI5 555 aaKnown RBP18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 AMNQ9BXJ7 453 aa18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 POTEFA5A3E0 1075 aa18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 MEIS2O14770 477 aa18.78■□□□□ 0.6
LAPTM4B-201ENST00000445593 POTEIP0CG38 1075 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms