RNA–Protein interactions for RNA: ENST00000444869.5

COMMD3-202, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-202ENST00000444869 RNF20Q5VTR2 975 aa16.33■□□□□ 0.2
COMMD3-202ENST00000444869 NOL8Q76FK4 1167 aaKnown RBP16.33■□□□□ 0.2
COMMD3-202ENST00000444869 SAMD3Q8N6K7 520 aa16.33■□□□□ 0.2
COMMD3-202ENST00000444869 NSUN6Q8TEA1 469 aaKnown RBP16.33■□□□□ 0.2
COMMD3-202ENST00000444869 TRIM43Q96BQ3 446 aaPredicted RBP16.33■□□□□ 0.2
COMMD3-202ENST00000444869 LBHD1Q9BQE6 289 aaPredicted RBP16.33■□□□□ 0.2
COMMD3-202ENST00000444869 SPZ1Q9BXG8 430 aa16.33■□□□□ 0.2
COMMD3-202ENST00000444869 WDR11Q9BZH6 1224 aa16.33■□□□□ 0.2
COMMD3-202ENST00000444869 AP5M1Q9H0R1 490 aa16.33■□□□□ 0.2
COMMD3-202ENST00000444869 PCDHA1Q9Y5I3 950 aa16.33■□□□□ 0.2
COMMD3-202ENST00000444869 LAMA3Q16787 3333 aa16.33■□□□□ 0.2
COMMD3-202ENST00000444869 SCN10AQ9Y5Y9 1956 aa16.33■□□□□ 0.2
COMMD3-202ENST00000444869 PNMA6FA0A0J9YX94 578 aa16.32■□□□□ 0.2
COMMD3-202ENST00000444869 A0A0U1RQG5 324 aaPredicted RBP16.32■□□□□ 0.2
COMMD3-202ENST00000444869 KIAA0355O15063 1070 aa16.32■□□□□ 0.2
COMMD3-202ENST00000444869 NKRFO15226 690 aaKnown RBP eCLIP16.32■□□□□ 0.2
COMMD3-202ENST00000444869 PQBP1O60828 265 aaKnown RBP16.32■□□□□ 0.2
COMMD3-202ENST00000444869 CABYRO75952 493 aa16.32■□□□□ 0.2
COMMD3-202ENST00000444869 NEFLP07196 543 aa16.32■□□□□ 0.2
COMMD3-202ENST00000444869 SMARCA1P28370 1054 aa16.32■□□□□ 0.2
COMMD3-202ENST00000444869 FAAP100Q0VG06 881 aa16.32■□□□□ 0.2
COMMD3-202ENST00000444869 LRIT3Q3SXY7 679 aa16.32■□□□□ 0.2
COMMD3-202ENST00000444869 MROH7Q68CQ1 1323 aa16.32■□□□□ 0.2
COMMD3-202ENST00000444869 SGMS1Q86VZ5 419 aa16.32■□□□□ 0.2
COMMD3-202ENST00000444869 HOMER1Q86YM7 354 aa16.32■□□□□ 0.2
COMMD3-202ENST00000444869 SLC43A3Q8NBI5 491 aa16.32■□□□□ 0.2
COMMD3-202ENST00000444869 SPDYE1Q8NFV5 336 aaPredicted RBP16.32■□□□□ 0.2
COMMD3-202ENST00000444869 CTCFLQ8NI51 663 aaPredicted RBP16.32■□□□□ 0.2
COMMD3-202ENST00000444869 SCFD2Q8WU76 684 aa16.32■□□□□ 0.2
COMMD3-202ENST00000444869 IWS1Q96ST2 819 aa16.32■□□□□ 0.2
COMMD3-202ENST00000444869 RMDN3Q96TC7 470 aa16.32■□□□□ 0.2
COMMD3-202ENST00000444869 MYL10Q9BUA6 226 aa16.32■□□□□ 0.2
COMMD3-202ENST00000444869 PRDM5Q9NQX1 630 aaPredicted RBP16.32■□□□□ 0.2
COMMD3-202ENST00000444869 ARVCFO00192 962 aa16.31■□□□□ 0.2
COMMD3-202ENST00000444869 SOX1O00570 391 aaPredicted RBP16.31■□□□□ 0.2
COMMD3-202ENST00000444869 CFBP00751 764 aa16.31■□□□□ 0.2
COMMD3-202ENST00000444869 KIF5BP33176 963 aa16.31■□□□□ 0.2
COMMD3-202ENST00000444869 PPP2R5BQ15173 497 aa16.31■□□□□ 0.2
COMMD3-202ENST00000444869 CCDC62Q6P9F0 684 aa16.31■□□□□ 0.2
COMMD3-202ENST00000444869 CXCL17Q6UXB2 119 aa16.31■□□□□ 0.2
COMMD3-202ENST00000444869 RASEFQ8IZ41 740 aa16.31■□□□□ 0.2
COMMD3-202ENST00000444869 PXMP2Q9NR77 195 aa16.31■□□□□ 0.2
COMMD3-202ENST00000444869 TBX21Q9UL17 535 aa16.31■□□□□ 0.2
COMMD3-202ENST00000444869 CCDC69A6NI79 296 aa16.3■□□□□ 0.2
COMMD3-202ENST00000444869 DCDC2CA8MYV0 355 aa16.3■□□□□ 0.2
COMMD3-202ENST00000444869 ZEB2O60315 1214 aa16.3■□□□□ 0.2
COMMD3-202ENST00000444869 ARIH2O95376 493 aa16.3■□□□□ 0.2
COMMD3-202ENST00000444869 CALM1P0DP23 149 aa16.3■□□□□ 0.2
COMMD3-202ENST00000444869 CALM2P0DP24 149 aa16.3■□□□□ 0.2
COMMD3-202ENST00000444869 CALM3P0DP25 149 aa16.3■□□□□ 0.2
COMMD3-202ENST00000444869 ITGB8P26012 769 aa16.3■□□□□ 0.2
COMMD3-202ENST00000444869 EXOSC10Q01780 885 aaKnown RBP16.3■□□□□ 0.2
COMMD3-202ENST00000444869 FAM126BQ8IXS8 530 aa16.3■□□□□ 0.2
COMMD3-202ENST00000444869 BADQ92934 168 aa16.3■□□□□ 0.2
COMMD3-202ENST00000444869 KCNB2Q92953 911 aa16.3■□□□□ 0.2
COMMD3-202ENST00000444869 NEK1Q96PY6 1258 aa16.3■□□□□ 0.2
COMMD3-202ENST00000444869 LZTS2Q9BRK4 669 aa16.3■□□□□ 0.2
COMMD3-202ENST00000444869 SZT2Q5T011 3432 aa16.29■□□□□ 0.2
COMMD3-202ENST00000444869 GRIN2DO15399 1336 aa16.29■□□□□ 0.2
COMMD3-202ENST00000444869 FRMPD4Q14CM0 1322 aa16.29■□□□□ 0.2
COMMD3-202ENST00000444869 PLEKHA8P1O95397 391 aa16.29■□□□□ 0.2
COMMD3-202ENST00000444869 EIF2AK2P19525 551 aaKnown RBP16.29■□□□□ 0.2
COMMD3-202ENST00000444869 GNAQP50148 359 aa16.29■□□□□ 0.2
COMMD3-202ENST00000444869 CPT1AP50416 773 aa16.29■□□□□ 0.2
COMMD3-202ENST00000444869 TTLL4Q14679 1199 aa16.29■□□□□ 0.2
COMMD3-202ENST00000444869 STXBP2Q15833 593 aa16.29■□□□□ 0.2
COMMD3-202ENST00000444869 ADCK5Q3MIX3 580 aa16.29■□□□□ 0.2
COMMD3-202ENST00000444869 ARHGEF16Q5VV41 709 aa16.29■□□□□ 0.2
COMMD3-202ENST00000444869 NFXL1Q6ZNB6 911 aa16.29■□□□□ 0.2
COMMD3-202ENST00000444869 PDCD2LQ9BRP1 358 aa16.29■□□□□ 0.2
COMMD3-202ENST00000444869 SEZ6LQ9BYH1 1024 aa16.29■□□□□ 0.2
COMMD3-202ENST00000444869 LRRC2Q9BYS8 371 aa16.29■□□□□ 0.2
COMMD3-202ENST00000444869 A6NJR5 290 aa16.28■□□□□ 0.2
COMMD3-202ENST00000444869 CD4P01730 458 aa16.28■□□□□ 0.2
COMMD3-202ENST00000444869 NR3C2P08235 984 aa16.28■□□□□ 0.2
COMMD3-202ENST00000444869 TXNP10599 105 aaKnown RBP16.28■□□□□ 0.2
COMMD3-202ENST00000444869 PURAQ00577 322 aaKnown RBP16.28■□□□□ 0.2
COMMD3-202ENST00000444869 KRT32Q14532 448 aa16.28■□□□□ 0.2
COMMD3-202ENST00000444869 APOA5Q6Q788 366 aa16.28■□□□□ 0.2
COMMD3-202ENST00000444869 DHX32Q7L7V1 743 aaKnown RBP16.28■□□□□ 0.2
COMMD3-202ENST00000444869 SRBD1Q8N5C6 995 aaKnown RBP16.28■□□□□ 0.2
COMMD3-202ENST00000444869 OR6J1Q8NGC5 347 aa16.28■□□□□ 0.2
COMMD3-202ENST00000444869 COPS5Q92905 334 aa16.28■□□□□ 0.2
COMMD3-202ENST00000444869 LRCH3Q96II8 777 aa16.28■□□□□ 0.2
COMMD3-202ENST00000444869 TMEM39AQ9NV64 488 aa16.28■□□□□ 0.2
COMMD3-202ENST00000444869 POLR3EQ9NVU0 708 aa16.28■□□□□ 0.2
COMMD3-202ENST00000444869 SLC12A7Q9Y666 1083 aa16.28■□□□□ 0.2
COMMD3-202ENST00000444869 MYH7BA7E2Y1 1941 aa16.27■□□□□ 0.2
COMMD3-202ENST00000444869 GCOM1H8Y6P7 765 aaPredicted RBP16.27■□□□□ 0.2
COMMD3-202ENST00000444869 EIF3JO75822 258 aaKnown RBP16.27■□□□□ 0.2
COMMD3-202ENST00000444869 POLR2MP0CAP2 368 aa16.27■□□□□ 0.2
COMMD3-202ENST00000444869 RAG1P15918 1043 aa16.27■□□□□ 0.2
COMMD3-202ENST00000444869 RXRAP19793 462 aa16.27■□□□□ 0.2
COMMD3-202ENST00000444869 HOXA13P31271 388 aaPredicted RBP16.27■□□□□ 0.2
COMMD3-202ENST00000444869 HSPA4P34932 840 aa16.27■□□□□ 0.2
COMMD3-202ENST00000444869 ITGA7Q13683 1181 aa16.27■□□□□ 0.2
COMMD3-202ENST00000444869 ERICH6BQ5W0A0 696 aa16.27■□□□□ 0.2
COMMD3-202ENST00000444869 GPR153Q6NV75 609 aa16.27■□□□□ 0.2
COMMD3-202ENST00000444869 VTI1AQ96AJ9 217 aa16.27■□□□□ 0.2
COMMD3-202ENST00000444869 RRP36Q96EU6 259 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms