RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 CAPN9O14815 690 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 KLHL41O60662 606 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 SOCS5O75159 536 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 TPD52P55327 224 aaPredicted RBP4.49□□□□□ -1.69
UBR3-206ENST00000444475 CTAG1AP78358 180 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 MRPL28Q13084 256 aaKnown RBP4.49□□□□□ -1.69
UBR3-206ENST00000444475 SEMA5AQ13591 1074 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 CNNM4Q6P4Q7 775 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 SRGAP1Q7Z6B7 1085 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 REM2Q8IYK8 340 aaPredicted RBP4.49□□□□□ -1.69
UBR3-206ENST00000444475 VPS52Q8N1B4 723 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 RABGGTAQ92696 567 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 GPKOWQ92917 476 aaPredicted RBP eCLIP4.49□□□□□ -1.69
UBR3-206ENST00000444475 ORAI3Q9BRQ5 295 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 TLR6Q9Y2C9 796 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 SOS1Q07889 1333 aaPredicted RBP4.49□□□□□ -1.69
UBR3-206ENST00000444475 IPO7O95373 1038 aaKnown RBP4.49□□□□□ -1.69
UBR3-206ENST00000444475 HDCP19113 662 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 PPM1AP35813 382 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 RBM6P78332 1123 aaKnown RBP4.49□□□□□ -1.69
UBR3-206ENST00000444475 SLC7A5Q01650 507 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 DNM1Q05193 864 aaKnown RBP4.49□□□□□ -1.69
UBR3-206ENST00000444475 EIF4A2Q14240 407 aaKnown RBP4.49□□□□□ -1.69
UBR3-206ENST00000444475 WTAPQ15007 396 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 PCBP2Q15366 365 aaKnown RBP eCLIP4.49□□□□□ -1.69
UBR3-206ENST00000444475 ZNF423Q2M1K9 1284 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 C10orf76Q5T2E6 689 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 HGSNATQ68CP4 663 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 KCNV1Q6PIU1 500 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 CNSTQ6PJW8 725 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 LMBR1LQ6UX01 489 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 FBXO27Q8NI29 283 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 GTPBP4Q9BZE4 634 aaKnown RBP4.49□□□□□ -1.69
UBR3-206ENST00000444475 RXFP3Q9NSD7 469 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 POGKQ9P215 609 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 CGNQ9P2M7 1197 aaKnown RBP4.49□□□□□ -1.69
UBR3-206ENST00000444475 DUSP12Q9UNI6 340 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 CEP83Q9Y592 693 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 SCRIBQ14160 1630 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 A0A087X0M5 115 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 A0A1B0GX30 115 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 PCDHGA12O60330 932 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 ALAS1P13196 640 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 CDC16Q13042 620 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 SSPNQ14714 243 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 ACAP1Q15027 740 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 RASA2Q15283 850 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 C11orf91Q3C1V1 193 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 CRTC1Q6UUV9 634 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 SLC9B2Q86UD5 537 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 CCDC144CPQ8IYA2 1237 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 SLFN12Q8IYM2 578 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 TBC1D21Q8IYX1 336 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 TMEM102Q8N9M5 508 aaPredicted RBP4.49□□□□□ -1.69
UBR3-206ENST00000444475 DRAXINQ8NBI3 349 aaPredicted RBP4.49□□□□□ -1.69
UBR3-206ENST00000444475 PPP1R16BQ96T49 567 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 TMEM120AQ9BXJ8 343 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 TXLNGYQ9BZA5 131 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 SLC7A5P2Q9GIP4 190 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 EFCC1Q9HA90 598 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 TRPV5Q9NQA5 729 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 PCDHGA9Q9Y5G4 932 aaKnown RBP4.49□□□□□ -1.69
UBR3-206ENST00000444475 PCDHGA8Q9Y5G5 932 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 PCDHGA7Q9Y5G6 932 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 PCDHGA6Q9Y5G7 932 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 PCDHGA3Q9Y5H0 932 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 PCDHGA2Q9Y5H1 932 aa4.49□□□□□ -1.69
UBR3-206ENST00000444475 SYNJ2BP-COX16A0A087WUM0 186 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 A0A087WV62 115 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 FSD2A1L4K1 749 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 LRRC10BA6NIK2 292 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 GRIN3BO60391 1043 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 USO1O60763 962 aaKnown RBP4.48□□□□□ -1.69
UBR3-206ENST00000444475 GOSR1O95249 250 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 PF4P02776 101 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 CKMT1AP12532 417 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 MX2P20592 715 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 NOP2P46087 812 aaKnown RBP4.48□□□□□ -1.69
UBR3-206ENST00000444475 IL1RL1Q01638 556 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 NSUN2Q08J23 767 aaKnown RBP eCLIP4.48□□□□□ -1.69
UBR3-206ENST00000444475 PKN1Q16512 942 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 CHADLQ6NUI6 762 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 LLGL2Q6P1M3 1020 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 LBX2Q6XYB7 198 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 TRMT44Q8IYL2 757 aaKnown RBP4.48□□□□□ -1.69
UBR3-206ENST00000444475 TNS4Q8IZW8 715 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 AHI1Q8N157 1196 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 IL17RDQ8NFM7 739 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 ITM2CQ9NQX7 267 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 ZEB2O60315 1214 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 E2F6O75461 281 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 KRT10P13645 584 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 ELF1P32519 619 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 LIFRP42702 1097 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 TUBP50607 506 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 BTKQ06187 659 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 CLUL1Q15846 466 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 BTNL9Q6UXG8 535 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 CCDC149Q6ZUS6 474 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 SH3BP5LQ7L8J4 393 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms