RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 TRIM11Q96F44 468 aa12.27□□□□□ -0.45
FN1-211ENST00000443816 RAB3IPQ96QF0 476 aaPredicted RBP12.27□□□□□ -0.45
FN1-211ENST00000443816 CCDC160A6NGH7 325 aa12.27□□□□□ -0.45
FN1-211ENST00000443816 EBAG9O00559 213 aa12.27□□□□□ -0.45
FN1-211ENST00000443816 BRINP3Q76B58 766 aa12.27□□□□□ -0.45
FN1-211ENST00000443816 MAP7D3Q8IWC1 876 aa12.27□□□□□ -0.45
FN1-211ENST00000443816 PI4K2BQ8TCG2 481 aa12.27□□□□□ -0.45
FN1-211ENST00000443816 MICAL1Q8TDZ2 1067 aa12.27□□□□□ -0.45
FN1-211ENST00000443816 TCP11Q8WWU5 503 aa12.27□□□□□ -0.45
FN1-211ENST00000443816 DONSONQ9NYP3 566 aa12.27□□□□□ -0.45
FN1-211ENST00000443816 E9PCH4 1651 aa12.27□□□□□ -0.45
FN1-211ENST00000443816 PFKFB2O60825 505 aa12.27□□□□□ -0.45
FN1-211ENST00000443816 MFAP3P55082 362 aa12.27□□□□□ -0.45
FN1-211ENST00000443816 ME3Q16798 604 aa12.27□□□□□ -0.45
FN1-211ENST00000443816 EAF2Q96CJ1 260 aaPredicted RBP12.27□□□□□ -0.45
FN1-211ENST00000443816 CEP170P1Q96L14 293 aa12.27□□□□□ -0.45
FN1-211ENST00000443816 ERCC3P19447 782 aa12.27□□□□□ -0.45
FN1-211ENST00000443816 PNOCQ13519 176 aa12.27□□□□□ -0.45
FN1-211ENST00000443816 RYBPQ8N488 228 aaPredicted RBP12.27□□□□□ -0.45
FN1-211ENST00000443816 CCDC127Q96BQ5 260 aa12.27□□□□□ -0.45
FN1-211ENST00000443816 MRRFQ96E11 262 aaKnown RBP12.27□□□□□ -0.45
FN1-211ENST00000443816 MAN1A1P33908 653 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 MFSD14CQ5VZR4 134 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 EDC3Q96F86 508 aaKnown RBP12.26□□□□□ -0.45
FN1-211ENST00000443816 ZKSCAN5Q9Y2L8 839 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 URGCPQ8TCY9 931 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 FBXO40Q9UH90 709 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 STK25O00506 426 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 UNC13BO14795 1591 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 GTPBP6O43824 516 aaPredicted RBP12.26□□□□□ -0.45
FN1-211ENST00000443816 MYL3P08590 195 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 COPB2P35606 906 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 ADAM9Q13443 819 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 HHATQ5VTY9 493 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 U2AF1L4Q8WU68 220 aaKnown RBP12.26□□□□□ -0.45
FN1-211ENST00000443816 FTOQ9C0B1 505 aaKnown RBP eCLIP12.26□□□□□ -0.45
FN1-211ENST00000443816 PSMC2P35998 433 aaKnown RBP12.26□□□□□ -0.45
FN1-211ENST00000443816 ZMYM1Q5SVZ6 1142 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 MYSM1Q5VVJ2 828 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 RUNDC3BQ96NL0 473 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 RPF1Q9H9Y2 349 aaKnown RBP12.26□□□□□ -0.45
FN1-211ENST00000443816 ZSWIM6Q9HCJ5 1215 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 KCNH4Q9UQ05 1017 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 CYP4A11Q02928 519 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 ALCAMQ13740 583 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 NBPF11Q86T75 865 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 THEM5Q8N1Q8 247 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 TRIM58Q8NG06 486 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 GJD4Q96KN9 370 aaPredicted RBP12.26□□□□□ -0.45
FN1-211ENST00000443816 NLRC4Q9NPP4 1024 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 SEC31BQ9NQW1 1179 aa12.26□□□□□ -0.45
FN1-211ENST00000443816 ARHGAP6O43182 974 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 RNF139Q8WU17 664 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 VPS18Q9P253 973 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 NARFQ9UHQ1 456 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 S100BP04271 92 aaPredicted RBP12.25□□□□□ -0.45
FN1-211ENST00000443816 MECOMQ03112 1051 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 GOLGA8FQ08AF8 430 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 GOLGA8DPQ0D2H9 430 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 RNF207Q6ZRF8 634 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 EFCAB13Q8IY85 973 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 DCAF4Q8WV16 495 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 COL15A1P39059 1388 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 PNMA6FA0A0J9YX94 578 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 KRT15P19012 456 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 PAK2Q13177 524 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 B4GALNT4Q76KP1 1039 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 NCAPGQ9BPX3 1015 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 RNF181Q9P0P0 153 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 SERTAD1Q9UHV2 236 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 ATP11AP98196 1134 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 SEPT2Q15019 361 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 LONRF2Q1L5Z9 754 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 ARMCX2Q7L311 632 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 FASTKD5Q7L8L6 764 aaKnown RBP12.25□□□□□ -0.45
FN1-211ENST00000443816 FEM1BQ9UK73 627 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 ABCA9Q8IUA7 1624 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 JCADQ9P266 1359 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 LMNB2Q03252 620 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 EXOC3L4Q17RC7 722 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 C10orf67Q8IYJ2 551 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 SYNE4Q8N205 404 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 NT5C1BQ96P26 610 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 SRP68Q9UHB9 627 aaKnown RBP12.25□□□□□ -0.45
FN1-211ENST00000443816 CAPN2P17655 700 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 ARHGAP24Q8N264 748 aa12.25□□□□□ -0.45
FN1-211ENST00000443816 ABCB4P21439 1286 aa12.24□□□□□ -0.45
FN1-211ENST00000443816 GARSP41250 739 aaKnown RBP12.24□□□□□ -0.45
FN1-211ENST00000443816 CRKP46108 304 aa12.24□□□□□ -0.45
FN1-211ENST00000443816 GKAP1Q5VSY0 366 aaPredicted RBP12.24□□□□□ -0.45
FN1-211ENST00000443816 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.24□□□□□ -0.45
FN1-211ENST00000443816 LRRC4Q9HBW1 653 aa12.24□□□□□ -0.45
FN1-211ENST00000443816 KIAA1468Q9P260 1216 aa12.24□□□□□ -0.45
FN1-211ENST00000443816 MYCP01106 439 aaPredicted RBP12.24□□□□□ -0.45
FN1-211ENST00000443816 NSFP46459 744 aaKnown RBP12.24□□□□□ -0.45
FN1-211ENST00000443816 STAMQ92783 540 aa12.24□□□□□ -0.45
FN1-211ENST00000443816 SLC38A10Q9HBR0 1119 aa12.24□□□□□ -0.45
FN1-211ENST00000443816 ABCC12Q96J65 1359 aa12.24□□□□□ -0.45
FN1-211ENST00000443816 CACNA1FO60840 1977 aa12.24□□□□□ -0.45
FN1-211ENST00000443816 DNAJC21Q5F1R6 531 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms