RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 WDR37Q9Y2I8 494 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 AHDC1Q5TGY3 1603 aaPredicted RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 USP32Q8NFA0 1604 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 PARD3Q8TEW0 1356 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 EIF3HO15372 352 aaKnown RBP eCLIP3.07□□□□□ -1.926e-6■■■□□ 15.8
LIG4-203ENST00000442234 EGFRP00533 1210 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 HSPA8P11142 646 aaKnown RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 IL6STP40189 918 aaPredicted RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 NLRP5P59047 1200 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 TGFB2P61812 414 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 TUBB4BP68371 445 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 CCZ1BP86790 482 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 CCZ1P86791 482 aaPredicted RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 PDCLQ13371 301 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 KIF22Q14807 665 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 STX1AQ16623 288 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 FAM117BQ6P1L5 589 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 THSD4Q6ZMP0 1018 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 GADL1Q6ZQY3 521 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 CAPN12Q6ZSI9 719 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 TRIM50Q86XT4 487 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 C7orf61Q8IZ16 206 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 NME8Q8N427 588 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 DNAJC5GQ8N7S2 189 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 CCHCR1Q8TD31 782 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 RNF166Q96A37 237 aaPredicted RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 FERMT2Q96AC1 680 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 LRCH3Q96II8 777 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 FGD4Q96M96 766 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 TTC14Q96N46 770 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 POLR3CQ9BUI4 534 aaPredicted RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 CNNM1Q9NRU3 951 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 TUBA8Q9NY65 449 aaPredicted RBP3.07□□□□□ -1.92
LIG4-203ENST00000442234 CPA4Q9UI42 421 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 C2CD2Q9Y426 696 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 N6AMT1Q9Y5N5 214 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 ZFYVE26Q68DK2 2539 aa3.07□□□□□ -1.92
LIG4-203ENST00000442234 ABCC11Q96J66 1382 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 E7EVH7 732 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 STXBP3O00186 592 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 MAP2K7O14733 419 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 PPEF1O14829 653 aaPredicted RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 N4BP3O15049 544 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 ZNF202O95125 648 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 ANP32DO95626 131 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 F13A1P00488 732 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 PDHA1P08559 390 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 ATP4AP20648 1035 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 MLH1P40692 756 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 TUFMP49411 452 aaKnown RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 NEK2P51955 445 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 CXCL9Q07325 125 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 SEPT6Q14141 434 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 PLCB4Q15147 1175 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 CFAP100Q494V2 611 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 ODF2Q5BJF6 829 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 BEND6Q5SZJ8 279 aaPredicted RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 BRAPQ7Z569 592 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 SRGAP1Q7Z6B7 1085 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 UBE2Q1Q7Z7E8 422 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 PEX5LQ8IYB4 626 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 GALNT15Q8N3T1 639 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 MRPL50Q8N5N7 158 aaKnown RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 AOPEPQ8N6M6 819 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 CCDC63Q8NA47 563 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 FBF1Q8TES7 1133 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 RIN2Q8WYP3 895 aaPredicted RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 ATP6V0A1Q93050 837 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 DHX58Q96C10 678 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 ZNF653Q96CK0 615 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 GCC1Q96CN9 775 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 JAKMIP1Q96N16 626 aaKnown RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 SDF4Q9BRK5 362 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 FTOQ9C0B1 505 aaKnown RBP eCLIP3.06□□□□□ -1.92
LIG4-203ENST00000442234 NOD2Q9HC29 1040 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 ARHGEF10LQ9HCE6 1279 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 FAM114A2Q9NRY5 505 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 RTEL1Q9NZ71 1219 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 PRKAG2Q9UGJ0 569 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 TMA7Q9Y2S6 64 aaKnown RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 TMEM98Q9Y2Y6 226 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 TSC22D4Q9Y3Q8 395 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 UBR1Q8IWV7 1749 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 ZC3H4Q9UPT8 1303 aaKnown RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 FAM186AA6NE01 2351 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 PIK3R4Q99570 1358 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 CASP8AP2Q9UKL3 1982 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 F8VZ95 297 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 MARCH6O60337 910 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 HSF2BPO75031 334 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 FLOT1O75955 427 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 VIMP08670 466 aaKnown RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 TOP1P11387 765 aaKnown RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 KCNA2P16389 499 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 ALDH3A1P30838 453 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 LACTBP83111 547 aaPredicted RBP3.06□□□□□ -1.92
LIG4-203ENST00000442234 KLC1Q07866 573 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 TMEM62Q0P6H9 643 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 MAP7Q14244 749 aa3.06□□□□□ -1.92
LIG4-203ENST00000442234 MYBPC3Q14896 1274 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms