RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 VCPKMTQ9H867 229 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 EMILIN3Q9NT22 766 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 PRELID1Q9Y255 219 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 TACC3Q9Y6A5 838 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 SLIT3O75094 1523 aa11.76□□□□□ -0.53
SYNE2-206ENST00000441438 USP17L15C9J2P7 530 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 USP17L10C9JJH3 530 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 USP17L13C9JLJ4 530 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 USP17L12C9JPN9 530 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 USP17L11C9JVI0 530 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 USP17L21D6R901 530 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 USP17L18D6R9N7 530 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 USP17L22D6RA61 530 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 USP17L17D6RBQ6 530 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 USP17L19D6RCP7 530 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 USP17L20D6RJB6 530 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 C21orf2O43822 256 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 BAG4O95429 457 aaKnown RBP11.75□□□□□ -0.53
SYNE2-206ENST00000441438 GARTP22102 1010 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 PBLDP30039 288 aaPredicted RBP11.75□□□□□ -0.53
SYNE2-206ENST00000441438 S100A5P33763 92 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 GUCY2FP51841 1108 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 HDAC4P56524 1084 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 USP17L24Q0WX57 530 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 IMMTQ16891 758 aaKnown RBP11.75□□□□□ -0.53
SYNE2-206ENST00000441438 GFOD2Q3B7J2 385 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 THNSL2Q86YJ6 484 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 SPATA2LQ8IUW3 424 aaPredicted RBP11.75□□□□□ -0.53
SYNE2-206ENST00000441438 PPP1R14CQ8TAE6 165 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 RASSF1Q9NS23 344 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 SBNO1A3KN83 1393 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 LDHAL6AQ6ZMR3 332 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 NBPF15Q8N660 670 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 HOOK2Q96ED9 719 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 FAXDC2Q96IV6 333 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 TBATAQ96M53 351 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 ELAC1Q9H777 363 aaKnown RBP11.75□□□□□ -0.53
SYNE2-206ENST00000441438 ZFATQ9P243 1243 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 USP2O75604 605 aaPredicted RBP11.75□□□□□ -0.53
SYNE2-206ENST00000441438 TBX2Q13207 712 aaPredicted RBP11.75□□□□□ -0.53
SYNE2-206ENST00000441438 COG2Q14746 738 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 SLC45A4Q5BKX6 768 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 TATDN1Q6P1N9 297 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 USP51Q70EK9 711 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 PRIMPOLQ96LW4 560 aa11.75□□□□□ -0.53
SYNE2-206ENST00000441438 LRRC10BA6NIK2 292 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 MCF2LO15068 1137 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 KLF4O43474 513 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 RPS2P15880 293 aaKnown RBP11.74□□□□□ -0.53
SYNE2-206ENST00000441438 EIF4BP23588 611 aaKnown RBP11.74□□□□□ -0.53
SYNE2-206ENST00000441438 HSD17B2P37059 387 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 CLCN2P51788 898 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 C21orf58P58505 322 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 MUM1L1Q5H9M0 696 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 GALNT13Q8IUC8 556 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 FBXO22Q8NEZ5 403 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 EIF2B4Q9UI10 523 aaKnown RBP11.74□□□□□ -0.53
SYNE2-206ENST00000441438 TTLL3Q9Y4R7 772 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 CD2APQ9Y5K6 639 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 ADAMTS4O75173 837 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 RPSAP08865 295 aaKnown RBP11.74□□□□□ -0.53
SYNE2-206ENST00000441438 SLC12A2P55011 1212 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 GABPB1Q06547 395 aaPredicted RBP11.74□□□□□ -0.53
SYNE2-206ENST00000441438 MPP3Q13368 585 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 FAM47EQ6ZV65 393 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 RASSF8Q8NHQ8 419 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 NFKBIL1Q9UBC1 381 aaPredicted RBP11.74□□□□□ -0.53
SYNE2-206ENST00000441438 PXDNQ92626 1479 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 RGPD3A6NKT7 1758 aaPredicted RBP11.74□□□□□ -0.53
SYNE2-206ENST00000441438 RGPD4Q7Z3J3 1758 aa11.74□□□□□ -0.53
SYNE2-206ENST00000441438 SART1O43290 800 aaKnown RBP11.73□□□□□ -0.53
SYNE2-206ENST00000441438 HOXC12P31275 282 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 FMR1Q06787 632 aaKnown RBP eCLIP11.73□□□□□ -0.53
SYNE2-206ENST00000441438 FAPQ12884 760 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 WDR43Q15061 677 aaKnown RBP eCLIP11.73□□□□□ -0.53
SYNE2-206ENST00000441438 INAQ16352 499 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 SH2D4BQ5SQS7 431 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 CAPRIN2Q6IMN6 1127 aaKnown RBP11.73□□□□□ -0.53
SYNE2-206ENST00000441438 SEPT14Q6ZU15 432 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 RUFY3Q7L099 469 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 TRIM55Q9BYV6 548 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 CCDC113Q9H0I3 377 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 ANGPTL3Q9Y5C1 460 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 NRAPQ86VF7 1730 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 POLR3AO14802 1390 aaPredicted RBP11.73□□□□□ -0.53
SYNE2-206ENST00000441438 TADA3O75528 432 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 PMLP29590 882 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 POLR2BP30876 1174 aaKnown RBP11.73□□□□□ -0.53
SYNE2-206ENST00000441438 TRIM28Q13263 835 aaKnown RBP11.73□□□□□ -0.53
SYNE2-206ENST00000441438 RAB33AQ14088 237 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 VPS53Q5VIR6 699 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 CCDC148Q8NFR7 591 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 ACMSDQ8TDX5 336 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 HNRNPLLQ8WVV9 542 aaKnown RBP11.73□□□□□ -0.53
SYNE2-206ENST00000441438 IRX2Q9BZI1 471 aaPredicted RBP11.73□□□□□ -0.53
SYNE2-206ENST00000441438 C19orf44Q9H6X5 657 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 ARHGAP28Q9P2N2 729 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 SLC4A7Q9Y6M7 1214 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 KIF20BQ96Q89 1820 aa11.73□□□□□ -0.53
SYNE2-206ENST00000441438 ERLIN1O75477 346 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms