RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 FANCBQ8NB91 859 aa15.91■□□□□ 0.14
LTBR-202ENST00000440421 GLT1D1Q96MS3 346 aa15.91■□□□□ 0.14
LTBR-202ENST00000440421 JAKMIP1Q96N16 626 aaKnown RBP15.91■□□□□ 0.14
LTBR-202ENST00000440421 LZTS2Q9BRK4 669 aa15.91■□□□□ 0.14
LTBR-202ENST00000440421 PRDM5Q9NQX1 630 aaPredicted RBP15.91■□□□□ 0.14
LTBR-202ENST00000440421 PRKAG2Q9UGJ0 569 aa15.91■□□□□ 0.14
LTBR-202ENST00000440421 SNX14Q9Y5W7 946 aa15.91■□□□□ 0.14
LTBR-202ENST00000440421 PQBP1O60828 265 aaKnown RBP15.9■□□□□ 0.14
LTBR-202ENST00000440421 HMGB1P09429 215 aaKnown RBP15.9■□□□□ 0.14
LTBR-202ENST00000440421 NKX3-2P78367 333 aa15.9■□□□□ 0.14
LTBR-202ENST00000440421 MDM2Q00987 491 aaPredicted RBP15.9■□□□□ 0.14
LTBR-202ENST00000440421 DUSP28Q4G0W2 176 aa15.9■□□□□ 0.14
LTBR-202ENST00000440421 APOA5Q6Q788 366 aa15.9■□□□□ 0.14
LTBR-202ENST00000440421 SEPT14Q6ZU15 432 aa15.9■□□□□ 0.14
LTBR-202ENST00000440421 KCNB2Q92953 911 aa15.9■□□□□ 0.14
LTBR-202ENST00000440421 GDF15Q99988 308 aa15.9■□□□□ 0.14
LTBR-202ENST00000440421 PRO3102Q9H379 93 aa15.9■□□□□ 0.14
LTBR-202ENST00000440421 SEC63Q9UGP8 760 aaKnown RBP15.9■□□□□ 0.14
LTBR-202ENST00000440421 BRPF3Q9ULD4 1205 aa15.9■□□□□ 0.14
LTBR-202ENST00000440421 hCG_1642624A0A1W2PR95 340 aa15.89■□□□□ 0.13
LTBR-202ENST00000440421 RBM47A0AV96 593 aaKnown RBP15.89■□□□□ 0.13
LTBR-202ENST00000440421 GCOM1H8Y6P7 765 aaPredicted RBP15.89■□□□□ 0.13
LTBR-202ENST00000440421 POLR2MP0CAP2 368 aa15.89■□□□□ 0.13
LTBR-202ENST00000440421 SMARCA1P28370 1054 aa15.89■□□□□ 0.13
LTBR-202ENST00000440421 FGD1P98174 961 aa15.89■□□□□ 0.13
LTBR-202ENST00000440421 PPP2R5BQ15173 497 aa15.89■□□□□ 0.13
LTBR-202ENST00000440421 STXBP2Q15833 593 aa15.89■□□□□ 0.13
LTBR-202ENST00000440421 C1orf53Q5VUE5 145 aa15.89■□□□□ 0.13
LTBR-202ENST00000440421 CXCL17Q6UXB2 119 aa15.89■□□□□ 0.13
LTBR-202ENST00000440421 FCHSD1Q86WN1 690 aa15.89■□□□□ 0.13
LTBR-202ENST00000440421 SCFD2Q8WU76 684 aa15.89■□□□□ 0.13
LTBR-202ENST00000440421 COPS5Q92905 334 aa15.89■□□□□ 0.13
LTBR-202ENST00000440421 IWS1Q96ST2 819 aa15.89■□□□□ 0.13
LTBR-202ENST00000440421 PXMP2Q9NR77 195 aa15.89■□□□□ 0.13
LTBR-202ENST00000440421 NAP1L2Q9ULW6 460 aaPredicted RBP15.89■□□□□ 0.13
LTBR-202ENST00000440421 Q9Y3F1 56 aa15.89■□□□□ 0.13
LTBR-202ENST00000440421 KLF18A0A0U1RQI7 1052 aa15.88■□□□□ 0.13
LTBR-202ENST00000440421 NR3C2P08235 984 aa15.88■□□□□ 0.13
LTBR-202ENST00000440421 TXNP10599 105 aaKnown RBP15.88■□□□□ 0.13
LTBR-202ENST00000440421 GHRHRQ02643 423 aa15.88■□□□□ 0.13
LTBR-202ENST00000440421 BLOC1S2Q6QNY1 142 aa15.88■□□□□ 0.13
LTBR-202ENST00000440421 TMTC3Q6ZXV5 915 aa15.88■□□□□ 0.13
LTBR-202ENST00000440421 SH3RF1Q7Z6J0 888 aa15.88■□□□□ 0.13
LTBR-202ENST00000440421 OR6J1Q8NGC5 347 aa15.88■□□□□ 0.13
LTBR-202ENST00000440421 LBHD1Q9BQE6 289 aaPredicted RBP15.88■□□□□ 0.13
LTBR-202ENST00000440421 PDLIM7Q9NR12 457 aa15.88■□□□□ 0.13
LTBR-202ENST00000440421 MAP3K20Q9NYL2 800 aaKnown RBP15.88■□□□□ 0.13
LTBR-202ENST00000440421 ELP1O95163 1332 aa15.88■□□□□ 0.13
LTBR-202ENST00000440421 ZBTB43O43298 467 aa15.87■□□□□ 0.13
LTBR-202ENST00000440421 ZEB2O60315 1214 aa15.87■□□□□ 0.13
LTBR-202ENST00000440421 ARIH2O95376 493 aa15.87■□□□□ 0.13
LTBR-202ENST00000440421 CLTBP09497 229 aa15.87■□□□□ 0.13
LTBR-202ENST00000440421 MYCLP12524 364 aaPredicted RBP15.87■□□□□ 0.13
LTBR-202ENST00000440421 TTLL4Q14679 1199 aa15.87■□□□□ 0.13
LTBR-202ENST00000440421 RTN1Q16799 776 aa15.87■□□□□ 0.13
LTBR-202ENST00000440421 Q6ZUG5 572 aa15.87■□□□□ 0.13
LTBR-202ENST00000440421 SAMD3Q8N6K7 520 aa15.87■□□□□ 0.13
LTBR-202ENST00000440421 UBE2OQ9C0C9 1292 aaKnown RBP15.87■□□□□ 0.13
LTBR-202ENST00000440421 A0A0U1RQG5 324 aaPredicted RBP15.86■□□□□ 0.13
LTBR-202ENST00000440421 TRIM43BA6NCK2 446 aa15.86■□□□□ 0.13
LTBR-202ENST00000440421 GOLGA8AA7E2F4 631 aa15.86■□□□□ 0.13
LTBR-202ENST00000440421 GOLGA8BA8MQT2 603 aa15.86■□□□□ 0.13
LTBR-202ENST00000440421 NKRFO15226 690 aaKnown RBP eCLIP15.86■□□□□ 0.13
LTBR-202ENST00000440421 MYL3P08590 195 aa15.86■□□□□ 0.13
LTBR-202ENST00000440421 CASTP20810 708 aaKnown RBP15.86■□□□□ 0.13
LTBR-202ENST00000440421 BMP8BP34820 402 aa15.86■□□□□ 0.13
LTBR-202ENST00000440421 APOBRQ0VD83 1088 aa15.86■□□□□ 0.13
LTBR-202ENST00000440421 LY6KQ17RY6 165 aa15.86■□□□□ 0.13
LTBR-202ENST00000440421 IL31RAQ8NI17 732 aa15.86■□□□□ 0.13
LTBR-202ENST00000440421 TRIM43Q96BQ3 446 aaPredicted RBP15.86■□□□□ 0.13
LTBR-202ENST00000440421 ZFP91Q96JP5 570 aaPredicted RBP15.86■□□□□ 0.13
LTBR-202ENST00000440421 PDCD2LQ9BRP1 358 aa15.86■□□□□ 0.13
LTBR-202ENST00000440421 RBM28Q9NW13 759 aaKnown RBP15.86■□□□□ 0.13
LTBR-202ENST00000440421 DNAH12Q6ZR08 3092 aa15.86■□□□□ 0.13
LTBR-202ENST00000440421 LTBP2Q14767 1821 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 DCDC2CA8MYV0 355 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 ARVCFO00192 962 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 EIF3JO75822 258 aaKnown RBP15.85■□□□□ 0.13
LTBR-202ENST00000440421 CABYRO75952 493 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 RPS6KB1P23443 525 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 PSMA5P28066 241 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 CPT1AP50416 773 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 CDK7P50613 346 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 FXR1P51114 621 aaKnown RBP eCLIP15.85■□□□□ 0.13
LTBR-202ENST00000440421 PSMC6P62333 389 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 FAAP100Q0VG06 881 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 PGM5Q15124 567 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 CCDC62Q6P9F0 684 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 USP17L6PQ6QN14 398 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 ANKRD33Q7Z3H0 272 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 SMARCC2Q8TAQ2 1214 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 BADQ92934 168 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 BRF1Q92994 677 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 CUL5Q93034 780 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 USP26Q9BXU7 913 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 TMEM39AQ9NV64 488 aa15.85■□□□□ 0.13
LTBR-202ENST00000440421 KIAA1217Q5T5P2 1943 aa15.84■□□□□ 0.13
LTBR-202ENST00000440421 CCND2P30279 289 aa15.84■□□□□ 0.13
LTBR-202ENST00000440421 ITGA7Q13683 1181 aa15.84■□□□□ 0.13
LTBR-202ENST00000440421 BRDTQ58F21 947 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms