RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 ALX1Q15699 326 aa9.32□□□□□ -0.92
LINC00578-201ENST00000439009 SYDE2Q5VT97 1194 aa9.32□□□□□ -0.92
LINC00578-201ENST00000439009 TSHZ3Q63HK5 1081 aa9.32□□□□□ -0.92
LINC00578-201ENST00000439009 TTBK2Q6IQ55 1244 aa9.32□□□□□ -0.92
LINC00578-201ENST00000439009 CCDC62Q6P9F0 684 aa9.32□□□□□ -0.92
LINC00578-201ENST00000439009 RASGRP2Q7LDG7 609 aa9.32□□□□□ -0.92
LINC00578-201ENST00000439009 CAGE1Q8TC20 777 aa9.32□□□□□ -0.92
LINC00578-201ENST00000439009 PI4K2BQ8TCG2 481 aa9.32□□□□□ -0.92
LINC00578-201ENST00000439009 AFAP1L1Q8TED9 768 aa9.32□□□□□ -0.92
LINC00578-201ENST00000439009 SCFD2Q8WU76 684 aa9.32□□□□□ -0.92
LINC00578-201ENST00000439009 KHSRPQ92945 711 aaKnown RBP eCLIP9.32□□□□□ -0.92
LINC00578-201ENST00000439009 FTOQ9C0B1 505 aaKnown RBP eCLIP9.32□□□□□ -0.92
LINC00578-201ENST00000439009 INCENPQ9NQS7 918 aa9.32□□□□□ -0.92
LINC00578-201ENST00000439009 TCP11L1Q9NUJ3 509 aa9.32□□□□□ -0.92
LINC00578-201ENST00000439009 ISY1Q9ULR0 285 aaKnown RBP9.32□□□□□ -0.92
LINC00578-201ENST00000439009 HCN4Q9Y3Q4 1203 aa9.32□□□□□ -0.92
LINC00578-201ENST00000439009 WDR19Q8NEZ3 1342 aa9.31□□□□□ -0.92
LINC00578-201ENST00000439009 MUC6Q6W4X9 2439 aa9.31□□□□□ -0.92
LINC00578-201ENST00000439009 NEFLP07196 543 aa9.31□□□□□ -0.92
LINC00578-201ENST00000439009 TOP1P11387 765 aaKnown RBP9.31□□□□□ -0.92
LINC00578-201ENST00000439009 SELPP16109 830 aa9.31□□□□□ -0.92
LINC00578-201ENST00000439009 SLC16A2P36021 539 aa9.31□□□□□ -0.92
LINC00578-201ENST00000439009 ERVK-21P61565 698 aa9.31□□□□□ -0.92
LINC00578-201ENST00000439009 WDR5P61964 334 aaKnown RBP9.31□□□□□ -0.92
LINC00578-201ENST00000439009 RPS6P62753 249 aaKnown RBP9.31□□□□□ -0.92
LINC00578-201ENST00000439009 PPP2R5BQ15173 497 aa9.31□□□□□ -0.92
LINC00578-201ENST00000439009 FAM47CQ5HY64 1035 aa9.31□□□□□ -0.92
LINC00578-201ENST00000439009 SLC30A10Q6XR72 485 aa9.31□□□□□ -0.92
LINC00578-201ENST00000439009 RNF207Q6ZRF8 634 aa9.31□□□□□ -0.92
LINC00578-201ENST00000439009 SPRED2Q7Z698 418 aa9.31□□□□□ -0.92
LINC00578-201ENST00000439009 MPHOSPH6Q99547 160 aaKnown RBP9.31□□□□□ -0.92
LINC00578-201ENST00000439009 RAD9AQ99638 391 aa9.31□□□□□ -0.92
LINC00578-201ENST00000439009 CD320Q9NPF0 282 aa9.31□□□□□ -0.92
LINC00578-201ENST00000439009 LRRC37A2A6NM11 1700 aa9.31□□□□□ -0.92
LINC00578-201ENST00000439009 SCN10AQ9Y5Y9 1956 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 ABHD14A-ACY1A0A1B0GW23 586 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 PTPDC1A2A3K4 754 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 LCHNA4D1U4 455 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 B4DLN1 442 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 ARIH2O95376 493 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 GJB5O95377 273 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 SNHG28P0DPA3 235 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 TXNP10599 105 aaKnown RBP9.3□□□□□ -0.92
LINC00578-201ENST00000439009 MRPL12P52815 198 aaKnown RBP9.3□□□□□ -0.92
LINC00578-201ENST00000439009 CTDSPL2Q05D32 466 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 PDE4DQ08499 809 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 PTGISQ16647 500 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 CCDC96Q2M329 555 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 LEXMQ3ZCV2 418 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 CCDC155Q8N6L0 562 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 DHX38Q92620 1227 aaKnown RBP9.3□□□□□ -0.92
LINC00578-201ENST00000439009 KAT2BQ92831 832 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 COPS5Q92905 334 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 CHMP4CQ96CF2 233 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 TMEM47Q9BQJ4 181 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 SUGCTQ9HAC7 445 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 MYH7P12883 1935 aa9.3□□□□□ -0.92
LINC00578-201ENST00000439009 MYH4Q9Y623 1939 aa9.29□□□□□ -0.92
LINC00578-201ENST00000439009 RANBP6O60518 1105 aaKnown RBP9.29□□□□□ -0.92
LINC00578-201ENST00000439009 NBNO60934 754 aa9.29□□□□□ -0.92
LINC00578-201ENST00000439009 EFCAB14O75071 495 aa9.29□□□□□ -0.92
LINC00578-201ENST00000439009 PDHBP11177 359 aa9.29□□□□□ -0.92
LINC00578-201ENST00000439009 CALML3P27482 149 aa9.29□□□□□ -0.92
LINC00578-201ENST00000439009 KCNJ6P48051 423 aa9.29□□□□□ -0.92
LINC00578-201ENST00000439009 ZNF543Q08ER8 600 aa9.29□□□□□ -0.92
LINC00578-201ENST00000439009 MKRN4PQ13434 485 aaPredicted RBP9.29□□□□□ -0.92
LINC00578-201ENST00000439009 TRIM71Q2Q1W2 868 aaKnown RBP9.29□□□□□ -0.92
LINC00578-201ENST00000439009 C20orf194Q5TEA3 1177 aa9.29□□□□□ -0.92
LINC00578-201ENST00000439009 GDF6Q6KF10 455 aaPredicted RBP9.29□□□□□ -0.92
LINC00578-201ENST00000439009 CNKSR3Q6P9H4 555 aa9.29□□□□□ -0.92
LINC00578-201ENST00000439009 TRAF7Q6Q0C0 670 aa9.29□□□□□ -0.92
LINC00578-201ENST00000439009 TICAM2Q86XR7 235 aa9.29□□□□□ -0.92
LINC00578-201ENST00000439009 FAM178BQ8IXR5 827 aa9.29□□□□□ -0.92
LINC00578-201ENST00000439009 EMID1Q96A84 441 aaPredicted RBP9.29□□□□□ -0.92
LINC00578-201ENST00000439009 TTC14Q96N46 770 aa9.29□□□□□ -0.92
LINC00578-201ENST00000439009 TGS1Q96RS0 853 aaKnown RBP9.29□□□□□ -0.92
LINC00578-201ENST00000439009 GTF2IRD1Q9UHL9 959 aa9.29□□□□□ -0.92
LINC00578-201ENST00000439009 RCAN3Q9UKA8 241 aa9.29□□□□□ -0.92
LINC00578-201ENST00000439009 NOD1Q9Y239 953 aa9.29□□□□□ -0.92
LINC00578-201ENST00000439009 BRWD1Q9NSI6 2320 aa9.29□□□□□ -0.92
LINC00578-201ENST00000439009 TCF20Q9UGU0 1960 aaKnown RBP9.28□□□□□ -0.92
LINC00578-201ENST00000439009 GBF1Q92538 1859 aa9.28□□□□□ -0.92
LINC00578-201ENST00000439009 LINC01553A4QN01 128 aa9.28□□□□□ -0.92
LINC00578-201ENST00000439009 PRR33A8MZF0 331 aa9.28□□□□□ -0.92
LINC00578-201ENST00000439009 HAS3O00219 553 aa9.28□□□□□ -0.92
LINC00578-201ENST00000439009 GH1P01241 217 aa9.28□□□□□ -0.92
LINC00578-201ENST00000439009 MMP3P08254 477 aa9.28□□□□□ -0.92
LINC00578-201ENST00000439009 CKBP12277 381 aa9.28□□□□□ -0.92
LINC00578-201ENST00000439009 DEFB103AP81534 67 aa9.28□□□□□ -0.92
LINC00578-201ENST00000439009 ARHGAP1Q07960 439 aa9.28□□□□□ -0.92
LINC00578-201ENST00000439009 TCTN1Q2MV58 587 aa9.28□□□□□ -0.92
LINC00578-201ENST00000439009 VPS53Q5VIR6 699 aa9.28□□□□□ -0.92
LINC00578-201ENST00000439009 LRRC8DQ7L1W4 858 aa9.28□□□□□ -0.92
LINC00578-201ENST00000439009 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.28□□□□□ -0.92
LINC00578-201ENST00000439009 GDPD5Q8WTR4 605 aa9.28□□□□□ -0.92
LINC00578-201ENST00000439009 PPP1R13LQ8WUF5 828 aa9.28□□□□□ -0.92
LINC00578-201ENST00000439009 AFG1LQ8WV93 481 aa9.28□□□□□ -0.92
LINC00578-201ENST00000439009 IWS1Q96ST2 819 aa9.28□□□□□ -0.92
LINC00578-201ENST00000439009 FSD1Q9BTV5 496 aa9.28□□□□□ -0.92
LINC00578-201ENST00000439009 UBE2ZQ9H832 354 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms