RNA–Protein interactions for RNA: ENST00000438929.5

BDNF-210, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-210ENST00000438929 TBC1D5Q92609 795 aa6.77□□□□□ -1.33
BDNF-210ENST00000438929 C8orf37Q96NL8 207 aa6.77□□□□□ -1.33
BDNF-210ENST00000438929 TRIM7Q9C029 511 aa6.77□□□□□ -1.33
BDNF-210ENST00000438929 MTRF1LQ9UGC7 380 aaKnown RBP6.77□□□□□ -1.33
BDNF-210ENST00000438929 SEC63Q9UGP8 760 aaKnown RBP6.77□□□□□ -1.33
BDNF-210ENST00000438929 ADAMTS1Q9UHI8 967 aa6.77□□□□□ -1.33
BDNF-210ENST00000438929 PDE2AO00408 941 aaPredicted RBP6.76□□□□□ -1.33
BDNF-210ENST00000438929 PALMO75781 387 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 PLEKP08567 350 aaPredicted RBP6.76□□□□□ -1.33
BDNF-210ENST00000438929 CCDC38Q502W7 563 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 SV2BQ7L1I2 683 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 TSEN2Q8NCE0 465 aaKnown RBP6.76□□□□□ -1.33
BDNF-210ENST00000438929 STAG1Q8WVM7 1258 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 LMBR1Q8WVP7 490 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 ZBTB10Q96DT7 871 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 MAP3K14Q99558 947 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 VCPKMTQ9H867 229 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 KIF9Q9HAQ2 790 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 RASAL2Q9UJF2 1139 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 CAPN6Q9Y6Q1 641 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 LTBP4Q8N2S1 1624 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 SALL1Q9NSC2 1324 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 LRRD1A4D1F6 860 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 MYBL1P10243 752 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 PHKA1P46020 1223 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 NAPAP54920 295 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 INF2Q27J81 1249 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 CABP7Q86V35 215 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 RETREG2Q8NC44 543 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 GPKOWQ92917 476 aaPredicted RBP eCLIP6.76□□□□□ -1.33
BDNF-210ENST00000438929 SEC16BQ96JE7 1060 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 STMN4Q9H169 189 aaPredicted RBP6.76□□□□□ -1.33
BDNF-210ENST00000438929 IRAK4Q9NWZ3 460 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 LIMA1Q9UHB6 759 aaKnown RBP6.76□□□□□ -1.33
BDNF-210ENST00000438929 CAPN11Q9UMQ6 739 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 BAZ2BQ9UIF8 2168 aaKnown RBP6.76□□□□□ -1.33
BDNF-210ENST00000438929 ROBO2Q9HCK4 1378 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 ITIH6Q6UXX5 1313 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 PPP1R3GB7ZBB8 358 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 CCNT1O60563 726 aaKnown RBP6.76□□□□□ -1.33
BDNF-210ENST00000438929 CPP00450 1065 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 MMEP08473 750 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 PDHA1P08559 390 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 GBP1P32455 592 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 PLTPP55058 493 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 POLE2P56282 527 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 PPP2R2AP63151 447 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 IRX1P78414 480 aaPredicted RBP6.76□□□□□ -1.33
BDNF-210ENST00000438929 CRYMQ14894 314 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 ASIC2Q16515 512 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 DDX42Q86XP3 938 aaKnown RBP eCLIP6.76□□□□□ -1.33
BDNF-210ENST00000438929 RNF10Q8N5U6 811 aaKnown RBP6.76□□□□□ -1.33
BDNF-210ENST00000438929 ARHGEF2Q92974 986 aaKnown RBP6.76□□□□□ -1.33
BDNF-210ENST00000438929 P2RX5Q93086 422 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 LSM14BQ9BX40 385 aaKnown RBP6.76□□□□□ -1.33
BDNF-210ENST00000438929 DDX47Q9H0S4 455 aaKnown RBP6.76□□□□□ -1.33
BDNF-210ENST00000438929 LY9Q9HBG7 655 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 PRDM11Q9NQV5 511 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.76□□□□□ -1.33
BDNF-210ENST00000438929 MAGEB6P1A0A0J9YX57 407 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 PRPF6O94906 941 aaKnown RBP6.76□□□□□ -1.33
BDNF-210ENST00000438929 CALM1P0DP23 149 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 CALM2P0DP24 149 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 CALM3P0DP25 149 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 ABCB4P21439 1286 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 ADD2P35612 726 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 LIFRP42702 1097 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 LLGL1Q15334 1064 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 FAM47AQ5JRC9 791 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 ARMC9Q7Z3E5 817 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 DZIP3Q86Y13 1208 aaKnown RBP6.76□□□□□ -1.33
BDNF-210ENST00000438929 MRRFQ96E11 262 aaKnown RBP6.76□□□□□ -1.33
BDNF-210ENST00000438929 AGXT2Q9BYV1 514 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 MLXIPLQ9NP71 852 aa6.76□□□□□ -1.33
BDNF-210ENST00000438929 BIN2Q9UBW5 565 aaPredicted RBP6.76□□□□□ -1.33
BDNF-210ENST00000438929 COL15A1P39059 1388 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 LRRC53A6NM62 1247 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 PP2D1A8MPX8 630 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 H0Y3Z8 333 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 KCNA6P17658 529 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 GNAT2P19087 354 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 TOB1P50616 345 aaPredicted RBP6.75□□□□□ -1.33
BDNF-210ENST00000438929 HERVK_113P62684 666 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 DPYDQ12882 1025 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 TSNAXIP1Q2TAA8 658 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 MUM1Q2TAK8 710 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 PAPD7Q5XG87 772 aaKnown RBP6.75□□□□□ -1.33
BDNF-210ENST00000438929 TSC22D3Q99576 134 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 RNF26Q9BY78 433 aaPredicted RBP6.75□□□□□ -1.33
BDNF-210ENST00000438929 NOD2Q9HC29 1040 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 USP32Q8NFA0 1604 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 RNF225M0QZC1 329 aaPredicted RBP6.75□□□□□ -1.33
BDNF-210ENST00000438929 EVI5O60447 810 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 PLEKHA8P1O95397 391 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 TECP42680 631 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 ZBTB16Q05516 673 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 CALCOCO2Q13137 446 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 LRRC41Q15345 812 aa6.75□□□□□ -1.33
BDNF-210ENST00000438929 KCTD19Q17RG1 926 aaPredicted RBP6.75□□□□□ -1.33
BDNF-210ENST00000438929 TTMPQ5BVD1 217 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms