RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 PSPNO60542 156 aa5.48□□□□□ -1.53
LSM1P1-201ENST00000438629 CEBPAP49715 358 aaPredicted RBP5.48□□□□□ -1.53
LSM1P1-201ENST00000438629 GUCY1A3Q02108 690 aa5.48□□□□□ -1.53
LSM1P1-201ENST00000438629 TMEM62Q0P6H9 643 aa5.48□□□□□ -1.53
LSM1P1-201ENST00000438629 INF2Q27J81 1249 aa5.48□□□□□ -1.53
LSM1P1-201ENST00000438629 EGFLAMQ63HQ2 1017 aa5.48□□□□□ -1.53
LSM1P1-201ENST00000438629 KCNT2Q6UVM3 1135 aa5.48□□□□□ -1.53
LSM1P1-201ENST00000438629 LBX2Q6XYB7 198 aa5.48□□□□□ -1.53
LSM1P1-201ENST00000438629 GSTCDQ8NEC7 633 aa5.48□□□□□ -1.53
LSM1P1-201ENST00000438629 TRMT2BQ96GJ1 504 aaKnown RBP5.48□□□□□ -1.53
LSM1P1-201ENST00000438629 TMEM169Q96HH4 297 aa5.48□□□□□ -1.53
LSM1P1-201ENST00000438629 SLC6A17Q9H1V8 727 aa5.48□□□□□ -1.53
LSM1P1-201ENST00000438629 C19orf44Q9H6X5 657 aa5.48□□□□□ -1.53
LSM1P1-201ENST00000438629 NOTOA8MTQ0 251 aa5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 B4E1Z4 1266 aa5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 FAM47E-STBD1D6RA91 191 aa5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 RAPGEF3O95398 923 aa5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 BCL6P41182 706 aa5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 MVKQ03426 396 aa5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 PAK1Q13153 545 aa5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 PABPC4Q13310 644 aaKnown RBP eCLIP5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 KCNMB1Q16558 191 aa5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 MROH9Q5TGP6 573 aa5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 CEP68Q76N32 757 aa5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 MTDHQ86UE4 582 aaKnown RBP5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 ZSWIM9Q86XI8 627 aa5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 PANK1Q8TE04 598 aa5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 NINJ1Q92982 152 aa5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 INTS7Q9NVH2 962 aaKnown RBP5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 FAM53CQ9NYF3 392 aa5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 MAGEC2Q9UBF1 373 aaPredicted RBP5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 GULP1Q9UBP9 304 aa5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 COA3Q9Y2R0 106 aaPredicted RBP5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 YBX2Q9Y2T7 364 aaKnown RBP5.47□□□□□ -1.53
LSM1P1-201ENST00000438629 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 LOC105371045A0A1W2PR82 267 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 C22orf46C9J442 243 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 ABLIM1O14639 778 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 NPTXRO95502 500 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 FUCA1P04066 466 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 MPOP05164 745 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 GLI1P08151 1106 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 LCP1P13796 627 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 TRHRP34981 398 aaPredicted RBP5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 FLT3P36888 993 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 NR1I3Q14994 352 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 MBLAC2Q68D91 279 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 RIOX2Q8IUF8 465 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 SLC7A14Q8TBB6 771 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 DPF3Q92784 378 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 SHISA4Q96DD7 197 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 PLCD4Q9BRC7 762 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 MTA3Q9BTC8 594 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 SLC52A2Q9HAB3 445 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 BTG4Q9NY30 223 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 CLDND1Q9NY35 253 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 MARCH2Q9P0N8 246 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 PRKAB1Q9Y478 270 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 TRAF6Q9Y4K3 522 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 CD2APQ9Y5K6 639 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 X6R8D5 127 aa5.46□□□□□ -1.54
LSM1P1-201ENST00000438629 DGKIO75912 1065 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 CRTAMO95727 393 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 ASLP04424 464 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 ITGB5P18084 799 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 GYS2P54840 703 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 ERVFRD-1P60508 538 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 CBX2Q14781 532 aaPredicted RBP5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 CHRNA2Q15822 529 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 TIGD5Q53EQ6 642 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 FAM47CQ5HY64 1035 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 OLFML2BQ68BL8 750 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 BICRALQ6AI39 1079 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 IRF2BP1Q8IU81 584 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 NIM1KQ8IY84 436 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 Q8N1Y9 231 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 NETO2Q8NC67 525 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 PLEKHO2Q8TD55 490 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 RNF32Q9H0A6 362 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 EPB41L1Q9H4G0 881 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 NUDT5Q9UKK9 219 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 RWDD3Q9Y3V2 267 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 NUB1Q9Y5A7 615 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 ASXL2Q76L83 1435 aa5.45□□□□□ -1.54
LSM1P1-201ENST00000438629 OR14I1A6ND48 311 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 ARVCFO00192 962 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 SRGAP3O43295 1099 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 MAFKO60675 156 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 MSCO60682 206 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 PPP1R11O60927 126 aaPredicted RBP5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 SOD2P04179 222 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 CYBBP04839 570 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 SPIRE1Q08AE8 756 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 TKFCQ3LXA3 575 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 DALRD3Q5D0E6 543 aaKnown RBP5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 RNF187Q5TA31 235 aaPredicted RBP5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 FYB2Q5VWT5 728 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 PAQR3Q6TCH7 311 aa5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 UBE2R2Q712K3 238 aaPredicted RBP5.44□□□□□ -1.54
LSM1P1-201ENST00000438629 BRAPQ7Z569 592 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms