RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 TUBB4BP68371 445 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 SEPT6Q14141 434 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 TFDP1Q14186 410 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 PRPSAP1Q14558 356 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 PPP2R5BQ15173 497 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 SUPT20HL1Q3ZLR7 823 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 USP17L1Q7RTZ2 530 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 KRT26Q7Z3Y9 468 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 FANCLQ9NW38 375 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 SAR1BQ9Y6B6 198 aa11.29□□□□□ -0.6
SHPRH-206ENST00000438092 BICRAQ9NZM4 1560 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 GOLGA8IPA6NC78 632 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 GOLGA8JA6NMD2 632 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 PCCAP05165 728 aaPredicted RBP11.28□□□□□ -0.6
SHPRH-206ENST00000438092 GSPT1P15170 499 aaKnown RBP11.28□□□□□ -0.6
SHPRH-206ENST00000438092 RUFY4Q6ZNE9 571 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 RETREG2Q8NC44 543 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 SPDYE1Q8NFV5 336 aaPredicted RBP11.28□□□□□ -0.6
SHPRH-206ENST00000438092 PDE8BO95263 885 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 GDAP1Q8TB36 358 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 MTRQ99707 1265 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 PLCB1Q9NQ66 1216 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 LARSQ9P2J5 1176 aaKnown RBP11.28□□□□□ -0.6
SHPRH-206ENST00000438092 ADCY9O60503 1353 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 AOX1Q06278 1338 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 EXOC3L4Q17RC7 722 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.28□□□□□ -0.6
SHPRH-206ENST00000438092 ATP6V1E2Q96A05 226 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 CPSF3Q9UKF6 684 aaKnown RBP11.28□□□□□ -0.6
SHPRH-206ENST00000438092 SFI1A8K8P3 1242 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 AMNQ9BXJ7 453 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 ZNF341Q9BYN7 854 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 LMCD1Q9NZU5 365 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 KDM5AP29375 1690 aaKnown RBP11.28□□□□□ -0.6
SHPRH-206ENST00000438092 MLH3Q9UHC1 1453 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 ACTN1P12814 892 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 EIF2AK2P19525 551 aaKnown RBP11.28□□□□□ -0.6
SHPRH-206ENST00000438092 PHBP35232 272 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 NSFP46459 744 aaKnown RBP11.28□□□□□ -0.6
SHPRH-206ENST00000438092 CDO1Q16878 200 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 MMEL1Q495T6 779 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 B4GALNT4Q76KP1 1039 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 SLC7A3Q8WY07 619 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 HAUS1Q96CS2 278 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 CABS1Q96KC9 395 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 BABAM1Q9NWV8 329 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 KIAA1468Q9P260 1216 aa11.28□□□□□ -0.6
SHPRH-206ENST00000438092 SOS2Q07890 1332 aaPredicted RBP11.28□□□□□ -0.6
SHPRH-206ENST00000438092 ATF2P15336 505 aa11.27□□□□□ -0.6
SHPRH-206ENST00000438092 SKIV2LQ15477 1246 aaKnown RBP11.27□□□□□ -0.6
SHPRH-206ENST00000438092 KRT33BQ14525 404 aa11.27□□□□□ -0.6
SHPRH-206ENST00000438092 FAM26FQ5R3K3 315 aa11.27□□□□□ -0.6
SHPRH-206ENST00000438092 CNOT6LQ96LI5 555 aaKnown RBP11.27□□□□□ -0.6
SHPRH-206ENST00000438092 ARHGAP6O43182 974 aa11.27□□□□□ -0.61
SHPRH-206ENST00000438092 OR8K1Q8NGG5 319 aa11.27□□□□□ -0.61
SHPRH-206ENST00000438092 MAIP1Q8WWC4 291 aa11.27□□□□□ -0.61
SHPRH-206ENST00000438092 OAS2P29728 719 aaKnown RBP11.27□□□□□ -0.61
SHPRH-206ENST00000438092 EHHADHQ08426 723 aa11.27□□□□□ -0.61
SHPRH-206ENST00000438092 PKP1Q13835 747 aa11.27□□□□□ -0.61
SHPRH-206ENST00000438092 TBCKQ8TEA7 893 aa11.27□□□□□ -0.61
SHPRH-206ENST00000438092 TSC1Q92574 1164 aa11.27□□□□□ -0.61
SHPRH-206ENST00000438092 ENC1O14682 589 aa11.27□□□□□ -0.61
SHPRH-206ENST00000438092 S100BP04271 92 aaPredicted RBP11.27□□□□□ -0.61
SHPRH-206ENST00000438092 PTPREP23469 700 aa11.27□□□□□ -0.61
SHPRH-206ENST00000438092 INPP5BP32019 993 aa11.27□□□□□ -0.61
SHPRH-206ENST00000438092 ZNF772Q68DY9 489 aaPredicted RBP11.27□□□□□ -0.61
SHPRH-206ENST00000438092 LCORLQ8N3X6 602 aa11.27□□□□□ -0.61
SHPRH-206ENST00000438092 IMPACTQ9P2X3 320 aa11.27□□□□□ -0.61
SHPRH-206ENST00000438092 GNL1P36915 607 aaPredicted RBP11.27□□□□□ -0.61
SHPRH-206ENST00000438092 PTK2Q05397 1052 aa11.27□□□□□ -0.61
SHPRH-206ENST00000438092 PDZD4Q76G19 769 aaPredicted RBP11.27□□□□□ -0.61
SHPRH-206ENST00000438092 ZNF274Q96GC6 653 aaPredicted RBP11.27□□□□□ -0.61
SHPRH-206ENST00000438092 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.27□□□□□ -0.61
SHPRH-206ENST00000438092 ZNF18P17022 549 aa11.26□□□□□ -0.61
SHPRH-206ENST00000438092 TRIM68Q6AZZ1 485 aa11.26□□□□□ -0.61
SHPRH-206ENST00000438092 DNAAF3Q8N9W5 541 aa11.26□□□□□ -0.61
SHPRH-206ENST00000438092 CCDC94Q9BW85 323 aaPredicted RBP11.26□□□□□ -0.61
SHPRH-206ENST00000438092 FAM196BA6NMK8 535 aa11.26□□□□□ -0.61
SHPRH-206ENST00000438092 DDX27Q96GQ7 796 aaKnown RBP11.26□□□□□ -0.61
SHPRH-206ENST00000438092 TSR3Q9UJK0 312 aaKnown RBP11.26□□□□□ -0.61
SHPRH-206ENST00000438092 BMP3P12645 472 aa11.26□□□□□ -0.61
SHPRH-206ENST00000438092 NR2F2P24468 414 aa11.26□□□□□ -0.61
SHPRH-206ENST00000438092 CXCR5P32302 372 aa11.26□□□□□ -0.61
SHPRH-206ENST00000438092 KCNG1Q9UIX4 513 aa11.26□□□□□ -0.61
SHPRH-206ENST00000438092 ATP7AQ04656 1500 aa11.26□□□□□ -0.61
SHPRH-206ENST00000438092 PDIA3P30101 505 aaKnown RBP11.26□□□□□ -0.61
SHPRH-206ENST00000438092 SYDE2Q5VT97 1194 aa11.26□□□□□ -0.61
SHPRH-206ENST00000438092 ZNF589Q86UQ0 364 aaPredicted RBP11.26□□□□□ -0.61
SHPRH-206ENST00000438092 OGFRQ9NZT2 677 aa11.26□□□□□ -0.61
SHPRH-206ENST00000438092 ZMYND10O75800 440 aa11.26□□□□□ -0.61
SHPRH-206ENST00000438092 DDAH1O94760 285 aa11.26□□□□□ -0.61
SHPRH-206ENST00000438092 TROVE2P10155 538 aaKnown RBP eCLIP11.26□□□□□ -0.61
SHPRH-206ENST00000438092 TRIP13Q15645 432 aaPredicted RBP11.26□□□□□ -0.61
SHPRH-206ENST00000438092 PDXDC2PQ6P474 469 aa11.26□□□□□ -0.61
SHPRH-206ENST00000438092 TMEM63CQ9P1W3 806 aa11.26□□□□□ -0.61
SHPRH-206ENST00000438092 BAIAP2L1Q9UHR4 511 aa11.26□□□□□ -0.61
SHPRH-206ENST00000438092 F5H423 210 aaPredicted RBP11.25□□□□□ -0.61
SHPRH-206ENST00000438092 MMP10P09238 476 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 ELF1P32519 619 aa11.25□□□□□ -0.61
SHPRH-206ENST00000438092 CTTNQ14247 550 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms