RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 VCAM1P19320 739 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 ATP1A2P50993 1020 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 USP14P54578 494 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 HMGCS2P54868 508 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 SNAP25P60880 206 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 AKAP17AQ02040 695 aaKnown RBP8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 SWI5Q1ZZU3 235 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 KRT40Q6A162 431 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 ZBTB33Q86T24 672 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 ANKMY2Q8IV38 441 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 C2orf69Q8N8R5 385 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 OPTNQ96CV9 577 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 SLC10A4Q96EP9 437 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 RRP36Q96EU6 259 aaKnown RBP8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 C8orf76Q96K31 380 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 FBXO28Q9NVF7 368 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 VPS54Q9P1Q0 977 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 PRR12Q9ULL5 1215 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 ISY1Q9ULR0 285 aaKnown RBP8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 KCNH4Q9UQ05 1017 aa8.11□□□□□ -1.11
LSM3P3-201ENST00000436601 A0A0G2JLL6 359 aaPredicted RBP8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 PNMA6FA0A0J9YX94 578 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 H3BQV1 296 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 STXBP3O00186 592 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 CXCL11O14625 94 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 ZBTB5O15062 677 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 ADAMTS3O15072 1205 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 F13A1P00488 732 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 STAT2P52630 851 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 RESTQ13127 1097 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 PPIL2Q13356 520 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 MOGSQ13724 837 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 NPY5RQ15761 445 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 IFFO2Q5TF58 517 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 SYDE2Q5VT97 1194 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 WWC2Q6AWC2 1192 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 PHLDB3Q6NSJ2 640 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 TRAF7Q6Q0C0 670 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 PRRT2Q7Z6L0 340 aaPredicted RBP8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 FAM160B2Q86V87 743 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 HOMER1Q86YM7 354 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 SMC1BQ8NDV3 1235 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 CHURC1Q8WUH1 139 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 TNPO1Q92973 898 aaKnown RBP8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 CHAMP1Q96JM3 812 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 PHF20Q9BVI0 1012 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 UNC93B1Q9H1C4 597 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 RPAP3Q9H6T3 665 aaPredicted RBP8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 PRDM9Q9NQV7 894 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 FEM1BQ9UK73 627 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 KCNJ14Q9UNX9 436 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 UTRNP46939 3433 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 PAPPA2Q9BXP8 1791 aa8.1□□□□□ -1.11
LSM3P3-201ENST00000436601 KIF28PB7ZC32 967 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 TOMM70O94826 608 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 MMP1P03956 469 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 YY1P25490 414 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 COPS2P61201 443 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 KIF23Q02241 960 aaPredicted RBP8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 IKQ13123 557 aaPredicted RBP8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 TRIM29Q14134 588 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 CDC37Q16543 378 aaPredicted RBP8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 QRICH1Q2TAL8 776 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 TREML2Q5T2D2 321 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 CATSPERGQ6ZRH7 1159 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 HEATR3Q7Z4Q2 680 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 FERMT3Q86UX7 667 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 PRPF38AQ8NAV1 312 aaKnown RBP8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 ZNF784Q8NCA9 323 aaPredicted RBP8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 KIFC2Q96AC6 838 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 COA7Q96BR5 231 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 WNK4Q96J92 1243 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 SLF1Q9BQI6 1058 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 TANGO6Q9C0B7 1094 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 SH3GLB2Q9NR46 395 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 BARHL2Q9NY43 387 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 TMOD4Q9NZQ9 345 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 SEC63Q9UGP8 760 aaKnown RBP8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 NOD1Q9Y239 953 aa8.09□□□□□ -1.11
LSM3P3-201ENST00000436601 BTBD18B2RXH4 712 aa8.08□□□□□ -1.12
LSM3P3-201ENST00000436601 XBP1P17861 261 aa8.08□□□□□ -1.12
LSM3P3-201ENST00000436601 U2AF2P26368 475 aaKnown RBP eCLIP8.08□□□□□ -1.12
LSM3P3-201ENST00000436601 HUNKP57058 714 aa8.08□□□□□ -1.12
LSM3P3-201ENST00000436601 NLRP5P59047 1200 aa8.08□□□□□ -1.12
LSM3P3-201ENST00000436601 SPRYD7Q5W111 196 aa8.08□□□□□ -1.12
LSM3P3-201ENST00000436601 GPAT2Q6NUI2 795 aa8.08□□□□□ -1.12
LSM3P3-201ENST00000436601 FAM173BQ6P4H8 233 aa8.08□□□□□ -1.12
LSM3P3-201ENST00000436601 THSD4Q6ZMP0 1018 aa8.08□□□□□ -1.12
LSM3P3-201ENST00000436601 CLEC17AQ6ZS10 378 aa8.08□□□□□ -1.12
LSM3P3-201ENST00000436601 SH3RF1Q7Z6J0 888 aa8.08□□□□□ -1.12
LSM3P3-201ENST00000436601 SAPCD2Q86UD0 394 aa8.08□□□□□ -1.12
LSM3P3-201ENST00000436601 TNFRSF25Q93038 417 aa8.08□□□□□ -1.12
LSM3P3-201ENST00000436601 RANBP17Q9H2T7 1088 aaKnown RBP8.08□□□□□ -1.12
LSM3P3-201ENST00000436601 PPP1R9AQ9ULJ8 1098 aa8.08□□□□□ -1.12
LSM3P3-201ENST00000436601 ADAMTS5Q9UNA0 930 aa8.08□□□□□ -1.12
LSM3P3-201ENST00000436601 ZNF536O15090 1300 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 SMCO2A6NFE2 343 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 hCG_1984214I3L0E3 225 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 M0R2N6 131 aa8.07□□□□□ -1.12
LSM3P3-201ENST00000436601 VWA5AO00534 786 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms