RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 PIK3AP1Q6ZUJ8 805 aa19.21■□□□□ 0.67
CALD1-209ENST00000436461 DPP9Q86TI2 863 aa19.21■□□□□ 0.67
CALD1-209ENST00000436461 ABRAQ8N0Z2 381 aa19.21■□□□□ 0.67
CALD1-209ENST00000436461 FAM177A1Q8N128 213 aaPredicted RBP19.21■□□□□ 0.67
CALD1-209ENST00000436461 ERO1AQ96HE7 468 aa19.21■□□□□ 0.67
CALD1-209ENST00000436461 NUDT12Q9BQG2 462 aa19.21■□□□□ 0.67
CALD1-209ENST00000436461 MAP2K5Q13163 448 aa19.2■□□□□ 0.66
CALD1-209ENST00000436461 GNL2Q13823 731 aaKnown RBP19.2■□□□□ 0.66
CALD1-209ENST00000436461 IL31RAQ8NI17 732 aa19.2■□□□□ 0.66
CALD1-209ENST00000436461 RMDN3Q96TC7 470 aa19.2■□□□□ 0.66
CALD1-209ENST00000436461 GLT8D2Q9H1C3 349 aa19.2■□□□□ 0.66
CALD1-209ENST00000436461 FLT3LGP49771 235 aa19.19■□□□□ 0.66
CALD1-209ENST00000436461 LBX1P52954 281 aa19.19■□□□□ 0.66
CALD1-209ENST00000436461 ZNF792Q3KQV3 632 aa19.19■□□□□ 0.66
CALD1-209ENST00000436461 USP6NLQ92738 828 aa19.19■□□□□ 0.66
CALD1-209ENST00000436461 PXMP2Q9NR77 195 aa19.19■□□□□ 0.66
CALD1-209ENST00000436461 MAP3K20Q9NYL2 800 aaKnown RBP19.19■□□□□ 0.66
CALD1-209ENST00000436461 ZDHHC9Q9Y397 364 aa19.19■□□□□ 0.66
CALD1-209ENST00000436461 LRRC37A2A6NM11 1700 aa19.18■□□□□ 0.66
CALD1-209ENST00000436461 ALDH5A1P51649 535 aaPredicted RBP19.18■□□□□ 0.66
CALD1-209ENST00000436461 AP3B2Q13367 1082 aa19.18■□□□□ 0.66
CALD1-209ENST00000436461 CCL14Q16627 93 aa19.18■□□□□ 0.66
CALD1-209ENST00000436461 INF2Q27J81 1249 aa19.18■□□□□ 0.66
CALD1-209ENST00000436461 ARHGEF16Q5VV41 709 aa19.18■□□□□ 0.66
CALD1-209ENST00000436461 FAM173BQ6P4H8 233 aa19.18■□□□□ 0.66
CALD1-209ENST00000436461 SOCS4Q8WXH5 440 aa19.18■□□□□ 0.66
CALD1-209ENST00000436461 FOXP1Q9H334 677 aaPredicted RBP19.18■□□□□ 0.66
CALD1-209ENST00000436461 CCDC194A0A1B0GVG4 234 aa19.18■□□□□ 0.66
CALD1-209ENST00000436461 U2AF2P26368 475 aaKnown RBP eCLIP19.18■□□□□ 0.668e-8■□□□□ 10.4
CALD1-209ENST00000436461 FOXD4L6Q3SYB3 417 aaPredicted RBP19.18■□□□□ 0.66
CALD1-209ENST00000436461 FOXD4L3Q6VB84 417 aaPredicted RBP19.18■□□□□ 0.66
CALD1-209ENST00000436461 SAMD3Q8N6K7 520 aa19.18■□□□□ 0.66
CALD1-209ENST00000436461 TBCKQ8TEA7 893 aa19.18■□□□□ 0.66
CALD1-209ENST00000436461 FLRT1Q9NZU1 646 aa19.18■□□□□ 0.66
CALD1-209ENST00000436461 TRIM17Q9Y577 477 aa19.18■□□□□ 0.66
CALD1-209ENST00000436461 RPTORQ8N122 1335 aa19.17■□□□□ 0.66
CALD1-209ENST00000436461 WNT7AO00755 349 aa19.17■□□□□ 0.66
CALD1-209ENST00000436461 EDIL3O43854 480 aa19.17■□□□□ 0.66
CALD1-209ENST00000436461 ZSCAN22P10073 491 aaPredicted RBP19.17■□□□□ 0.66
CALD1-209ENST00000436461 RGS2P41220 211 aa19.17■□□□□ 0.66
CALD1-209ENST00000436461 RESTQ13127 1097 aa19.17■□□□□ 0.66
CALD1-209ENST00000436461 PGM5Q15124 567 aa19.17■□□□□ 0.66
CALD1-209ENST00000436461 NOSTRINQ8IVI9 506 aa19.17■□□□□ 0.66
CALD1-209ENST00000436461 MAML3Q96JK9 1138 aa19.17■□□□□ 0.66
CALD1-209ENST00000436461 PDCD2LQ9BRP1 358 aa19.17■□□□□ 0.66
CALD1-209ENST00000436461 SRRDQ9UH36 339 aa19.17■□□□□ 0.66
CALD1-209ENST00000436461 MYH15Q9Y2K3 1946 aa19.17■□□□□ 0.66
CALD1-209ENST00000436461 FOSP01100 380 aaPredicted RBP19.16■□□□□ 0.66
CALD1-209ENST00000436461 MYCLP12524 364 aaPredicted RBP19.16■□□□□ 0.66
CALD1-209ENST00000436461 ATP2B1P20020 1258 aa19.16■□□□□ 0.66
CALD1-209ENST00000436461 NONOQ15233 471 aaKnown RBP eCLIP19.16■□□□□ 0.66
CALD1-209ENST00000436461 OTOP1Q7RTM1 612 aa19.16■□□□□ 0.66
CALD1-209ENST00000436461 KRT25Q7Z3Z0 450 aa19.16■□□□□ 0.66
CALD1-209ENST00000436461 NSUN6Q8TEA1 469 aaKnown RBP19.16■□□□□ 0.66
CALD1-209ENST00000436461 FRMPD4Q14CM0 1322 aa19.15■□□□□ 0.66
CALD1-209ENST00000436461 BRD1O95696 1058 aa19.15■□□□□ 0.66
CALD1-209ENST00000436461 SREBF1P36956 1147 aa19.15■□□□□ 0.66
CALD1-209ENST00000436461 CTCFP49711 727 aaPredicted RBP19.15■□□□□ 0.66
CALD1-209ENST00000436461 ARHGAP4P98171 946 aa19.15■□□□□ 0.66
CALD1-209ENST00000436461 NBR1Q14596 966 aa19.15■□□□□ 0.66
CALD1-209ENST00000436461 EEPD1Q7L9B9 569 aa19.15■□□□□ 0.66
CALD1-209ENST00000436461 DNERQ8NFT8 737 aa19.15■□□□□ 0.66
CALD1-209ENST00000436461 APBA2Q99767 749 aa19.15■□□□□ 0.66
CALD1-209ENST00000436461 ADD3Q9UEY8 706 aaKnown RBP19.15■□□□□ 0.66
CALD1-209ENST00000436461 BRCA2P51587 3418 aa19.15■□□□□ 0.66
CALD1-209ENST00000436461 F13A1P00488 732 aa19.14■□□□□ 0.66
CALD1-209ENST00000436461 NR3C2P08235 984 aa19.14■□□□□ 0.66
CALD1-209ENST00000436461 HOXC6P09630 235 aa19.14■□□□□ 0.66
CALD1-209ENST00000436461 CHAMP1Q96JM3 812 aa19.14■□□□□ 0.66
CALD1-209ENST00000436461 MAF1Q9H063 256 aa19.14■□□□□ 0.66
CALD1-209ENST00000436461 RTEL1Q9NZ71 1219 aa19.14■□□□□ 0.66
CALD1-209ENST00000436461 KIAA1217Q5T5P2 1943 aa19.14■□□□□ 0.65
CALD1-209ENST00000436461 ELNP15502 786 aa19.14■□□□□ 0.65
CALD1-209ENST00000436461 HOXD10P28358 340 aa19.14■□□□□ 0.65
CALD1-209ENST00000436461 MRPS9P82933 396 aaKnown RBP19.14■□□□□ 0.65
CALD1-209ENST00000436461 LETM2Q2VYF4 491 aa19.14■□□□□ 0.65
CALD1-209ENST00000436461 ARMCX2Q7L311 632 aa19.14■□□□□ 0.65
CALD1-209ENST00000436461 CYP2W1Q8TAV3 490 aa19.14■□□□□ 0.65
CALD1-209ENST00000436461 CRYGNQ8WXF5 182 aa19.14■□□□□ 0.65
CALD1-209ENST00000436461 TRIB2Q92519 343 aa19.14■□□□□ 0.65
CALD1-209ENST00000436461 CYP2C19P33261 490 aa19.13■□□□□ 0.65
CALD1-209ENST00000436461 TOB1P50616 345 aaPredicted RBP19.13■□□□□ 0.65
CALD1-209ENST00000436461 TEX2Q8IWB9 1127 aa19.13■□□□□ 0.65
CALD1-209ENST00000436461 UIMC1Q96RL1 719 aa19.13■□□□□ 0.65
CALD1-209ENST00000436461 EHMT1Q9H9B1 1298 aa19.13■□□□□ 0.65
CALD1-209ENST00000436461 SLC5A4Q9NY91 659 aa19.13■□□□□ 0.65
CALD1-209ENST00000436461 DIS3Q9Y2L1 958 aaKnown RBP19.13■□□□□ 0.65
CALD1-209ENST00000436461 TDP2O95551 362 aa19.12■□□□□ 0.65
CALD1-209ENST00000436461 EDNRBP24530 442 aa19.12■□□□□ 0.65
CALD1-209ENST00000436461 PDE4DQ08499 809 aa19.12■□□□□ 0.65
CALD1-209ENST00000436461 TRIM32Q13049 653 aa19.12■□□□□ 0.65
CALD1-209ENST00000436461 MCTP2Q6DN12 878 aa19.12■□□□□ 0.65
CALD1-209ENST00000436461 NEK8Q86SG6 692 aa19.12■□□□□ 0.65
CALD1-209ENST00000436461 FBXO16Q8IX29 292 aaPredicted RBP19.12■□□□□ 0.65
CALD1-209ENST00000436461 RAET1EQ8TD07 263 aa19.12■□□□□ 0.65
CALD1-209ENST00000436461 TINF2Q9BSI4 451 aa19.12■□□□□ 0.65
CALD1-209ENST00000436461 PTCH2Q9Y6C5 1203 aa19.12■□□□□ 0.65
CALD1-209ENST00000436461 FAM86B1E9PN63 330 aa19.11■□□□□ 0.65
CALD1-209ENST00000436461 GNRH1P01148 92 aa19.11■□□□□ 0.65
CALD1-209ENST00000436461 FAM86B2P0C5J1 330 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms