RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 TMTC2Q8N394 836 aa21.23■□□□□ 0.99
HMGN1-207ENST00000436324 OR6J1Q8NGC5 347 aa21.23■□□□□ 0.99
HMGN1-207ENST00000436324 COPS5Q92905 334 aa21.23■□□□□ 0.99
HMGN1-207ENST00000436324 TCEANC2Q96MN5 208 aa21.23■□□□□ 0.99
HMGN1-207ENST00000436324 NEK1Q96PY6 1258 aa21.23■□□□□ 0.99
HMGN1-207ENST00000436324 MAF1Q9H063 256 aa21.23■□□□□ 0.99
HMGN1-207ENST00000436324 TMEM39AQ9NV64 488 aa21.23■□□□□ 0.99
HMGN1-207ENST00000436324 SOX1O00570 391 aaPredicted RBP21.22■□□□□ 0.99
HMGN1-207ENST00000436324 PPP2R5BQ15173 497 aa21.22■□□□□ 0.99
HMGN1-207ENST00000436324 CMTR1Q8N1G2 835 aaKnown RBP21.22■□□□□ 0.99
HMGN1-207ENST00000436324 SCFD2Q8WU76 684 aa21.22■□□□□ 0.99
HMGN1-207ENST00000436324 MAP3K14Q99558 947 aa21.22■□□□□ 0.99
HMGN1-207ENST00000436324 ARVCFO00192 962 aa21.21■□□□□ 0.99
HMGN1-207ENST00000436324 PLEKHA8P1O95397 391 aa21.21■□□□□ 0.99
HMGN1-207ENST00000436324 TXNP10599 105 aaKnown RBP21.21■□□□□ 0.99
HMGN1-207ENST00000436324 ITGB8P26012 769 aa21.21■□□□□ 0.99
HMGN1-207ENST00000436324 LIFRP42702 1097 aa21.21■□□□□ 0.99
HMGN1-207ENST00000436324 HSD17B4P51659 736 aa21.21■□□□□ 0.99
HMGN1-207ENST00000436324 FAAP100Q0VG06 881 aa21.21■□□□□ 0.99
HMGN1-207ENST00000436324 ADCK5Q3MIX3 580 aa21.21■□□□□ 0.99
HMGN1-207ENST00000436324 ANKRD33Q7Z3H0 272 aa21.21■□□□□ 0.99
HMGN1-207ENST00000436324 PXMP2Q9NR77 195 aa21.21■□□□□ 0.99
HMGN1-207ENST00000436324 SLC12A7Q9Y666 1083 aa21.21■□□□□ 0.99
HMGN1-207ENST00000436324 ARIH2O95376 493 aa21.2■□□□□ 0.98
HMGN1-207ENST00000436324 MYL3P08590 195 aa21.2■□□□□ 0.98
HMGN1-207ENST00000436324 RAG1P15918 1043 aa21.2■□□□□ 0.98
HMGN1-207ENST00000436324 CDK7P50613 346 aa21.2■□□□□ 0.98
HMGN1-207ENST00000436324 PSMC6P62333 389 aa21.2■□□□□ 0.98
HMGN1-207ENST00000436324 TRAF1Q13077 416 aa21.2■□□□□ 0.98
HMGN1-207ENST00000436324 STXBP2Q15833 593 aa21.2■□□□□ 0.98
HMGN1-207ENST00000436324 FCHSD1Q86WN1 690 aa21.2■□□□□ 0.98
HMGN1-207ENST00000436324 SRBD1Q8N5C6 995 aaKnown RBP21.2■□□□□ 0.98
HMGN1-207ENST00000436324 RRP36Q96EU6 259 aaKnown RBP21.2■□□□□ 0.98
HMGN1-207ENST00000436324 LRCH3Q96II8 777 aa21.2■□□□□ 0.98
HMGN1-207ENST00000436324 TOX2Q96NM4 488 aa21.2■□□□□ 0.98
HMGN1-207ENST00000436324 IWS1Q96ST2 819 aa21.2■□□□□ 0.98
HMGN1-207ENST00000436324 MYH6P13533 1939 aa21.19■□□□□ 0.98
HMGN1-207ENST00000436324 BAZ2BQ9UIF8 2168 aaKnown RBP21.19■□□□□ 0.98
HMGN1-207ENST00000436324 GCOM1H8Y6P7 765 aaPredicted RBP21.19■□□□□ 0.98
HMGN1-207ENST00000436324 CABYRO75952 493 aa21.19■□□□□ 0.98
HMGN1-207ENST00000436324 NR3C2P08235 984 aa21.19■□□□□ 0.98
HMGN1-207ENST00000436324 POLR2MP0CAP2 368 aa21.19■□□□□ 0.98
HMGN1-207ENST00000436324 MYCLP12524 364 aaPredicted RBP21.19■□□□□ 0.98
HMGN1-207ENST00000436324 GNAQP50148 359 aa21.19■□□□□ 0.98
HMGN1-207ENST00000436324 TTLL4Q14679 1199 aa21.19■□□□□ 0.98
HMGN1-207ENST00000436324 MICU3Q86XE3 530 aa21.19■□□□□ 0.98
HMGN1-207ENST00000436324 CCDC82Q8N4S0 544 aa21.19■□□□□ 0.98
HMGN1-207ENST00000436324 LZTS2Q9BRK4 669 aa21.19■□□□□ 0.98
HMGN1-207ENST00000436324 SPZ1Q9BXG8 430 aa21.19■□□□□ 0.98
HMGN1-207ENST00000436324 KIAA0355O15063 1070 aa21.18■□□□□ 0.98
HMGN1-207ENST00000436324 NKRFO15226 690 aaKnown RBP eCLIP21.18■□□□□ 0.98
HMGN1-207ENST00000436324 CALM1P0DP23 149 aa21.18■□□□□ 0.98
HMGN1-207ENST00000436324 CALM2P0DP24 149 aa21.18■□□□□ 0.98
HMGN1-207ENST00000436324 CALM3P0DP25 149 aa21.18■□□□□ 0.98
HMGN1-207ENST00000436324 EXOSC10Q01780 885 aaKnown RBP21.18■□□□□ 0.98
HMGN1-207ENST00000436324 ITGA7Q13683 1181 aa21.18■□□□□ 0.98
HMGN1-207ENST00000436324 LY6KQ17RY6 165 aa21.18■□□□□ 0.98
HMGN1-207ENST00000436324 SYNE3Q6ZMZ3 975 aa21.18■□□□□ 0.98
HMGN1-207ENST00000436324 DHX32Q7L7V1 743 aaKnown RBP21.18■□□□□ 0.98
HMGN1-207ENST00000436324 PPP4R2Q9NY27 417 aa21.18■□□□□ 0.98
HMGN1-207ENST00000436324 SEC63Q9UGP8 760 aaKnown RBP21.18■□□□□ 0.98
HMGN1-207ENST00000436324 MROH7Q68CQ1 1323 aa21.18■□□□□ 0.98
HMGN1-207ENST00000436324 hCG_1642624A0A1W2PR95 340 aa21.17■□□□□ 0.98
HMGN1-207ENST00000436324 TLR3O15455 904 aaKnown RBP21.17■□□□□ 0.98
HMGN1-207ENST00000436324 CPA1P15085 419 aa21.17■□□□□ 0.98
HMGN1-207ENST00000436324 CPT1AP50416 773 aa21.17■□□□□ 0.98
HMGN1-207ENST00000436324 GHRHRQ02643 423 aa21.17■□□□□ 0.98
HMGN1-207ENST00000436324 KRT32Q14532 448 aa21.17■□□□□ 0.98
HMGN1-207ENST00000436324 TSGA10IPQ3SY00 556 aa21.17■□□□□ 0.98
HMGN1-207ENST00000436324 FANCBQ8NB91 859 aa21.17■□□□□ 0.98
HMGN1-207ENST00000436324 ZFP91Q96JP5 570 aaPredicted RBP21.17■□□□□ 0.98
HMGN1-207ENST00000436324 PDCD2LQ9BRP1 358 aa21.17■□□□□ 0.98
HMGN1-207ENST00000436324 POLR3EQ9NVU0 708 aa21.17■□□□□ 0.98
HMGN1-207ENST00000436324 GRIN2DO15399 1336 aa21.17■□□□□ 0.98
HMGN1-207ENST00000436324 BRDTQ58F21 947 aaPredicted RBP21.16■□□□□ 0.98
HMGN1-207ENST00000436324 CCDC62Q6P9F0 684 aa21.16■□□□□ 0.98
HMGN1-207ENST00000436324 SGMS1Q86VZ5 419 aa21.16■□□□□ 0.98
HMGN1-207ENST00000436324 FAM126BQ8IXS8 530 aa21.16■□□□□ 0.98
HMGN1-207ENST00000436324 SAMD3Q8N6K7 520 aa21.16■□□□□ 0.98
HMGN1-207ENST00000436324 IL31RAQ8NI17 732 aa21.16■□□□□ 0.98
HMGN1-207ENST00000436324 MAP3K20Q9NYL2 800 aaKnown RBP21.16■□□□□ 0.98
HMGN1-207ENST00000436324 EIF3JO75822 258 aaKnown RBP21.15■□□□□ 0.98
HMGN1-207ENST00000436324 SMARCA1P28370 1054 aa21.15■□□□□ 0.98
HMGN1-207ENST00000436324 PURAQ00577 322 aaKnown RBP21.15■□□□□ 0.98
HMGN1-207ENST00000436324 SHHQ15465 462 aa21.15■□□□□ 0.98
HMGN1-207ENST00000436324 C9orf50Q5SZB4 431 aa21.15■□□□□ 0.98
HMGN1-207ENST00000436324 TMTC3Q6ZXV5 915 aa21.15■□□□□ 0.98
HMGN1-207ENST00000436324 SLC43A3Q8NBI5 491 aa21.15■□□□□ 0.98
HMGN1-207ENST00000436324 PPP1R13LQ8WUF5 828 aa21.15■□□□□ 0.98
HMGN1-207ENST00000436324 JAKMIP1Q96N16 626 aaKnown RBP21.15■□□□□ 0.98
HMGN1-207ENST00000436324 TBX21Q9UL17 535 aa21.15■□□□□ 0.98
HMGN1-207ENST00000436324 BRPF3Q9ULD4 1205 aa21.15■□□□□ 0.98
HMGN1-207ENST00000436324 NAP1L2Q9ULW6 460 aaPredicted RBP21.15■□□□□ 0.98
HMGN1-207ENST00000436324 MRVI1Q9Y6F6 885 aa21.15■□□□□ 0.98
HMGN1-207ENST00000436324 LTBP2Q14767 1821 aa21.14■□□□□ 0.97
HMGN1-207ENST00000436324 TIMP1P01033 207 aa21.14■□□□□ 0.97
HMGN1-207ENST00000436324 GH1P01241 217 aa21.14■□□□□ 0.97
HMGN1-207ENST00000436324 CHMP4BP1P59074 171 aa21.14■□□□□ 0.97
HMGN1-207ENST00000436324 FGD1P98174 961 aa21.14■□□□□ 0.97
HMGN1-207ENST00000436324 PGM5Q15124 567 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms