RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 SCFD2Q8WU76 684 aa15.3■□□□□ 0.04
CDCA4P4-201ENST00000435216 SCLYQ96I15 445 aa15.3■□□□□ 0.04
CDCA4P4-201ENST00000435216 MPHOSPH6Q99547 160 aaKnown RBP15.3■□□□□ 0.04
CDCA4P4-201ENST00000435216 ALDH8A1Q9H2A2 487 aaPredicted RBP15.3■□□□□ 0.04
CDCA4P4-201ENST00000435216 POLR3EQ9NVU0 708 aa15.3■□□□□ 0.04
CDCA4P4-201ENST00000435216 CXXC1Q9P0U4 656 aaPredicted RBP15.3■□□□□ 0.04
CDCA4P4-201ENST00000435216 PRUNE2Q8WUY3 3088 aa15.29■□□□□ 0.04
CDCA4P4-201ENST00000435216 ABCB11O95342 1321 aa15.29■□□□□ 0.04
CDCA4P4-201ENST00000435216 CHMP4BP1P59074 171 aa15.29■□□□□ 0.04
CDCA4P4-201ENST00000435216 PTH1RQ03431 593 aa15.29■□□□□ 0.04
CDCA4P4-201ENST00000435216 SEPT14Q6ZU15 432 aa15.29■□□□□ 0.04
CDCA4P4-201ENST00000435216 SYTL5Q8TDW5 730 aaPredicted RBP15.29■□□□□ 0.04
CDCA4P4-201ENST00000435216 TIFAQ96CG3 184 aa15.29■□□□□ 0.04
CDCA4P4-201ENST00000435216 MTG1Q9BT17 334 aaPredicted RBP15.29■□□□□ 0.04
CDCA4P4-201ENST00000435216 PBX4Q9BYU1 374 aa15.29■□□□□ 0.04
CDCA4P4-201ENST00000435216 ZNF576Q9H609 170 aa15.29■□□□□ 0.04
CDCA4P4-201ENST00000435216 CNNM2Q9H8M5 875 aa15.29■□□□□ 0.04
CDCA4P4-201ENST00000435216 GPHNQ9NQX3 736 aaPredicted RBP15.29■□□□□ 0.04
CDCA4P4-201ENST00000435216 TAF6LQ9Y6J9 622 aa15.29■□□□□ 0.04
CDCA4P4-201ENST00000435216 GBF1Q92538 1859 aa15.29■□□□□ 0.04
CDCA4P4-201ENST00000435216 TMEM265A0A087WTH1 108 aa15.28■□□□□ 0.04
CDCA4P4-201ENST00000435216 FGBP02675 491 aa15.28■□□□□ 0.04
CDCA4P4-201ENST00000435216 NT5C2P49902 561 aa15.28■□□□□ 0.04
CDCA4P4-201ENST00000435216 SEC23AQ15436 765 aa15.28■□□□□ 0.04
CDCA4P4-201ENST00000435216 NBPF20Q3BBV1 942 aa15.28■□□□□ 0.04
CDCA4P4-201ENST00000435216 FBXO11Q86XK2 927 aa15.28■□□□□ 0.04
CDCA4P4-201ENST00000435216 RGS22Q8NE09 1264 aa15.28■□□□□ 0.04
CDCA4P4-201ENST00000435216 CUL9Q8IWT3 2517 aa15.28■□□□□ 0.04
CDCA4P4-201ENST00000435216 SCN5AQ14524 2016 aa15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 CHD9Q3L8U1 2897 aa15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 B4DLN1 442 aa15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 KLRF2D3W0D1 207 aa15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 NKRFO15226 690 aaKnown RBP eCLIP15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 PPP1R11O60927 126 aaPredicted RBP15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 CFBP00751 764 aa15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 CYP21A2P08686 494 aa15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 EIF2AK2P19525 551 aaKnown RBP15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 CHMLP26374 656 aa15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 MRPL12P52815 198 aaKnown RBP15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 TTLL4Q14679 1199 aa15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 LY6KQ17RY6 165 aa15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 CHST3Q7LGC8 479 aa15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 HERVK_113Q902F9 699 aa15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 VWCEQ96DN2 955 aa15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 RMDN3Q96TC7 470 aa15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 COL25A1Q9BXS0 654 aaPredicted RBP15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 SENP2Q9HC62 589 aa15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 MAD2L2Q9UI95 211 aa15.27■□□□□ 0.04
CDCA4P4-201ENST00000435216 SCN10AQ9Y5Y9 1956 aa15.27■□□□□ 0.03
CDCA4P4-201ENST00000435216 KIAA1217Q5T5P2 1943 aa15.27■□□□□ 0.03
CDCA4P4-201ENST00000435216 VCANP13611 3396 aa15.26■□□□□ 0.03
CDCA4P4-201ENST00000435216 RAD50Q92878 1312 aa15.26■□□□□ 0.03
CDCA4P4-201ENST00000435216 A6NJR5 290 aa15.26■□□□□ 0.03
CDCA4P4-201ENST00000435216 RBAK-RBAKDNI3L0D1 243 aa15.26■□□□□ 0.03
CDCA4P4-201ENST00000435216 OPLAHO14841 1288 aa15.26■□□□□ 0.03
CDCA4P4-201ENST00000435216 SLC35G1Q2M3R5 365 aa15.26■□□□□ 0.03
CDCA4P4-201ENST00000435216 BRDTQ58F21 947 aaPredicted RBP15.26■□□□□ 0.03
CDCA4P4-201ENST00000435216 CCDC62Q6P9F0 684 aa15.26■□□□□ 0.03
CDCA4P4-201ENST00000435216 DEFB128Q7Z7B8 93 aa15.26■□□□□ 0.03
CDCA4P4-201ENST00000435216 HOMER1Q86YM7 354 aa15.26■□□□□ 0.03
CDCA4P4-201ENST00000435216 MCF2L2Q86YR7 1114 aa15.26■□□□□ 0.03
CDCA4P4-201ENST00000435216 NSUN6Q8TEA1 469 aaKnown RBP15.26■□□□□ 0.03
CDCA4P4-201ENST00000435216 AFG1LQ8WV93 481 aa15.26■□□□□ 0.03
CDCA4P4-201ENST00000435216 SEZ6LQ9BYH1 1024 aa15.26■□□□□ 0.03
CDCA4P4-201ENST00000435216 MRPL11Q9Y3B7 192 aaKnown RBP15.26■□□□□ 0.03
CDCA4P4-201ENST00000435216 ZBBXA8MT70 800 aa15.25■□□□□ 0.03
CDCA4P4-201ENST00000435216 SUPT20HL2P0C7V6 817 aa15.25■□□□□ 0.03
CDCA4P4-201ENST00000435216 RABGGTBP53611 331 aa15.25■□□□□ 0.03
CDCA4P4-201ENST00000435216 ARHGAP1Q07960 439 aa15.25■□□□□ 0.03
CDCA4P4-201ENST00000435216 TRDNQ13061 729 aa15.25■□□□□ 0.03
CDCA4P4-201ENST00000435216 STXBP2Q15833 593 aa15.25■□□□□ 0.03
CDCA4P4-201ENST00000435216 ARHGEF16Q5VV41 709 aa15.25■□□□□ 0.03
CDCA4P4-201ENST00000435216 USP38Q8NB14 1042 aa15.25■□□□□ 0.03
CDCA4P4-201ENST00000435216 AMNQ9BXJ7 453 aa15.25■□□□□ 0.03
CDCA4P4-201ENST00000435216 NKX2-4Q9H2Z4 354 aa15.25■□□□□ 0.03
CDCA4P4-201ENST00000435216 PRDM12Q9H4Q4 367 aa15.25■□□□□ 0.03
CDCA4P4-201ENST00000435216 PALM3A6NDB9 673 aaPredicted RBP15.24■□□□□ 0.03
CDCA4P4-201ENST00000435216 E7EWF7 191 aa15.24■□□□□ 0.03
CDCA4P4-201ENST00000435216 IFIT3O14879 490 aaKnown RBP15.24■□□□□ 0.03
CDCA4P4-201ENST00000435216 SORBS3O60504 671 aa15.24■□□□□ 0.03
CDCA4P4-201ENST00000435216 GH1P01241 217 aa15.24■□□□□ 0.03
CDCA4P4-201ENST00000435216 MMP3P08254 477 aa15.24■□□□□ 0.03
CDCA4P4-201ENST00000435216 HOXA13P31271 388 aaPredicted RBP15.24■□□□□ 0.03
CDCA4P4-201ENST00000435216 STOX1Q6ZVD7 989 aa15.24■□□□□ 0.03
CDCA4P4-201ENST00000435216 RUFY2Q8WXA3 655 aa15.24■□□□□ 0.03
CDCA4P4-201ENST00000435216 ZFP91Q96JP5 570 aaPredicted RBP15.24■□□□□ 0.03
CDCA4P4-201ENST00000435216 PIGSQ96S52 555 aa15.24■□□□□ 0.03
CDCA4P4-201ENST00000435216 MTIF3Q9H2K0 278 aaKnown RBP15.24■□□□□ 0.03
CDCA4P4-201ENST00000435216 PXMP2Q9NR77 195 aa15.24■□□□□ 0.03
CDCA4P4-201ENST00000435216 YBX2Q9Y2T7 364 aaKnown RBP15.24■□□□□ 0.03
CDCA4P4-201ENST00000435216 PCDHA1Q9Y5I3 950 aa15.24■□□□□ 0.03
CDCA4P4-201ENST00000435216 U3KPZ7 1027 aaPredicted RBP15.24■□□□□ 0.03
CDCA4P4-201ENST00000435216 ZBTB5O15062 677 aa15.23■□□□□ 0.03
CDCA4P4-201ENST00000435216 KPNA6O60684 536 aa15.23■□□□□ 0.03
CDCA4P4-201ENST00000435216 NR3C2P08235 984 aa15.23■□□□□ 0.03
CDCA4P4-201ENST00000435216 MYCLP12524 364 aaPredicted RBP15.23■□□□□ 0.03
CDCA4P4-201ENST00000435216 MYOGP15173 224 aa15.23■□□□□ 0.03
CDCA4P4-201ENST00000435216 GRM4Q14833 912 aa15.23■□□□□ 0.03
CDCA4P4-201ENST00000435216 NFRKBQ6P4R8 1299 aa15.23■□□□□ 0.03
CDCA4P4-201ENST00000435216 RALYLQ86SE5 291 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms