RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 DHX37Q8IY37 1157 aaKnown RBP8.59□□□□□ -1.03
CNKSR3-202ENST00000433165 TRMT44Q8IYL2 757 aaKnown RBP8.59□□□□□ -1.03
CNKSR3-202ENST00000433165 RUBCNQ92622 972 aa8.59□□□□□ -1.03
CNKSR3-202ENST00000433165 FAM163AQ96GL9 167 aaPredicted RBP8.59□□□□□ -1.03
CNKSR3-202ENST00000433165 HAUS7Q99871 368 aa8.59□□□□□ -1.03
CNKSR3-202ENST00000433165 TDRD3Q9H7E2 651 aaKnown RBP8.59□□□□□ -1.03
CNKSR3-202ENST00000433165 VCPKMTQ9H867 229 aa8.59□□□□□ -1.03
CNKSR3-202ENST00000433165 HELLSQ9NRZ9 838 aa8.59□□□□□ -1.03
CNKSR3-202ENST00000433165 KLC4Q9NSK0 619 aa8.59□□□□□ -1.03
CNKSR3-202ENST00000433165 RBM28Q9NW13 759 aaKnown RBP8.59□□□□□ -1.03
CNKSR3-202ENST00000433165 GGA2Q9UJY4 613 aa8.59□□□□□ -1.03
CNKSR3-202ENST00000433165 FAM184BQ9ULE4 1060 aa8.59□□□□□ -1.03
CNKSR3-202ENST00000433165 ODF2LQ9ULJ1 636 aa8.59□□□□□ -1.03
CNKSR3-202ENST00000433165 CSADQ9Y600 493 aa8.59□□□□□ -1.03
CNKSR3-202ENST00000433165 AKAP11Q9UKA4 1901 aa8.59□□□□□ -1.03
CNKSR3-202ENST00000433165 NDUFAB1O14561 156 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 PHKA1P46020 1223 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 CKAP4Q07065 602 aaKnown RBP8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 TNNI3KQ59H18 835 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 MICALCLQ6ZW33 695 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 FMNL3Q8IVF7 1028 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 KBTBD3Q8NAB2 608 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 SPATA5Q8NB90 893 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 SPATA20Q8TB22 786 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 MAGEC3Q8TD91 643 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 FAM151AQ8WW52 585 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 SGSM3Q96HU1 749 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 CTAGE1Q96RT6 745 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 MMS19Q96T76 1030 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 HPS5Q9UPZ3 1129 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 SAMM50Q9Y512 469 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 FPGT-TNNI3KV9GXZ4 949 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 UBE2Q2LH0YL09 131 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 OPA1O60313 960 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 ENTPD3O75355 529 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 NPM3O75607 178 aaKnown RBP8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 CASP14P31944 242 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 FXR1P51114 621 aaKnown RBP eCLIP8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 IRX1P78414 480 aaPredicted RBP8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 ACTN3Q08043 901 aaPredicted RBP8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 DRP2Q13474 957 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 SLC9C2Q5TAH2 1124 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 CDKAL1Q5VV42 579 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 CYP26C1Q6V0L0 522 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 IQCA1Q86XH1 822 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 ZNF341Q9BYN7 854 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 GJB4Q9NTQ9 266 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 MYO5AQ9Y4I1 1855 aaKnown RBP8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 GAKO14976 1311 aa8.58□□□□□ -1.04
CNKSR3-202ENST00000433165 TCP10L2B9ZVM9 353 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 RTN2O75298 545 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 BAG3O95817 575 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 TM4SF4P48230 202 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 LBX1P52954 281 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 TIMM10P62072 90 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 RASGRF1Q13972 1273 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 EMC10Q5UCC4 262 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 CFHR5Q9BXR6 569 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 ABHD10Q9NUJ1 306 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 ABCF2Q9UG63 623 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 SAR1BQ9Y6B6 198 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 COL2A1P02458 1487 aaPredicted RBP8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 HSPD1P10809 573 aaKnown RBP8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 ADORA1P30542 326 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 NAP1L1P55209 391 aaKnown RBP8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 TTF1Q15361 905 aaPredicted RBP8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 CCDC40Q4G0X9 1142 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 SPATA1Q5VX52 437 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 SPRYD7Q5W111 196 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 APOBEC3HQ6NTF7 200 aaKnown RBP8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 ZNF662Q6ZS27 426 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 CHST3Q7LGC8 479 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 GSPT2Q8IYD1 628 aaKnown RBP8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 DAGLAQ9Y4D2 1042 aa8.57□□□□□ -1.04
CNKSR3-202ENST00000433165 SRRM3A6NNA2 597 aaPredicted RBP8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 TRIM14Q14142 442 aa8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 ARHGEF6Q15052 776 aa8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 ZMYM1Q5SVZ6 1142 aa8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 CEP85LQ5SZL2 805 aa8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 NBPF12Q5TAG4 269 aaPredicted RBP8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 NAA35Q5VZE5 725 aa8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 ALS2CLQ60I27 953 aa8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 CCDC13Q8IYE1 715 aa8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 CPLX3Q8WVH0 158 aa8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 WNK4Q96J92 1243 aa8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 GDAP1L1Q96MZ0 367 aa8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 IDI2Q9BXS1 227 aa8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 TRIM6Q9C030 488 aaPredicted RBP8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 HAUS4Q9H6D7 363 aa8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 USP40Q9NVE5 1235 aa8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 LRP2BPQ9P2M1 347 aa8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 REXO2Q9Y3B8 237 aaKnown RBP8.56□□□□□ -1.04
CNKSR3-202ENST00000433165 KLF18A0A0U1RQI7 1052 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 KLHL33A6NCF5 533 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 GOLGA8BA8MQT2 603 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 GOLIM4O00461 696 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 PAX7P23759 505 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 PRDX5P30044 214 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 GTF2A2P52657 109 aa8.55□□□□□ -1.04
CNKSR3-202ENST00000433165 CUL4BQ13620 913 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms