RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 FKBP1AP62942 108 aaKnown RBP16.43■□□□□ 0.22
RFTN1-203ENST00000432519 ABCB5Q2M3G0 1257 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 ERCC6LQ2NKX8 1250 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 USH1GQ495M9 461 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 KIAA1755Q5JYT7 1200 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 PPP4R3AQ6IN85 833 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 CSGALNACT2Q8N6G5 542 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 ACRBPQ8NEB7 543 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 CAMKK2Q96RR4 588 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 MAP7D2Q96T17 732 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 SEMA6BQ9H3T3 888 aa16.43■□□□□ 0.22
RFTN1-203ENST00000432519 MEIS2O14770 477 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 ERCC3P19447 782 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 ECE1P42892 770 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 MRPL12P52815 198 aaKnown RBP16.42■□□□□ 0.22
RFTN1-203ENST00000432519 GNG11P61952 73 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 ZNF507Q8TCN5 953 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 LARP4BQ92615 738 aaKnown RBP16.42■□□□□ 0.22
RFTN1-203ENST00000432519 CSRNP1Q96S65 589 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 CHP1Q99653 195 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 ABHD10Q9NUJ1 306 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 ITIH6Q6UXX5 1313 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 B4DLN1 442 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 URI1O94763 535 aaPredicted RBP16.42■□□□□ 0.22
RFTN1-203ENST00000432519 SPAG1Q07617 926 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 PPP1R18Q6NYC8 613 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 P2RX5Q93086 422 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 TRIM34Q9BYJ4 488 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 SCAF8Q9UPN6 1271 aaKnown RBP16.42■□□□□ 0.22
RFTN1-203ENST00000432519 PHLPP2Q6ZVD8 1323 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 TTC26A0AVF1 554 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 HMGB2P26583 209 aaKnown RBP16.42■□□□□ 0.22
RFTN1-203ENST00000432519 STAT3P40763 770 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 POTEAQ6S8J7 498 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 SV2BQ7L1I2 683 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 MB21D1Q8N884 522 aa16.42■□□□□ 0.22
RFTN1-203ENST00000432519 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.42■□□□□ 0.22
RFTN1-203ENST00000432519 RASSF10A6NK89 507 aa16.41■□□□□ 0.22
RFTN1-203ENST00000432519 KRT9P35527 623 aa16.41■□□□□ 0.22
RFTN1-203ENST00000432519 LRRC41Q15345 812 aa16.41■□□□□ 0.22
RFTN1-203ENST00000432519 TMEM179Q6ZVK1 233 aa16.41■□□□□ 0.22
RFTN1-203ENST00000432519 KIFC2Q96AC6 838 aa16.41■□□□□ 0.22
RFTN1-203ENST00000432519 ERO1AQ96HE7 468 aa16.41■□□□□ 0.22
RFTN1-203ENST00000432519 MAGEF1Q9HAY2 307 aa16.41■□□□□ 0.22
RFTN1-203ENST00000432519 LGALS16A8MUM7 142 aa16.41■□□□□ 0.22
RFTN1-203ENST00000432519 CCP110O43303 1012 aa16.41■□□□□ 0.22
RFTN1-203ENST00000432519 CCNE1P24864 410 aa16.41■□□□□ 0.22
RFTN1-203ENST00000432519 ORC2Q13416 577 aaPredicted RBP16.41■□□□□ 0.22
RFTN1-203ENST00000432519 SYCP1Q15431 976 aa16.41■□□□□ 0.22
RFTN1-203ENST00000432519 TMEM266Q2M3C6 531 aa16.41■□□□□ 0.22
RFTN1-203ENST00000432519 RAD54LQ92698 747 aa16.41■□□□□ 0.22
RFTN1-203ENST00000432519 DDX12PQ92771 950 aa16.41■□□□□ 0.22
RFTN1-203ENST00000432519 FGFBP2Q9BYJ0 223 aa16.41■□□□□ 0.22
RFTN1-203ENST00000432519 ZNF277Q9NRM2 450 aaPredicted RBP16.41■□□□□ 0.22
RFTN1-203ENST00000432519 SPDYE4A6NLX3 237 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 OPLAHO14841 1288 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 IDEP14735 1019 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 PDIA5Q14554 519 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 TMEM119Q4V9L6 283 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 CNGA4Q8IV77 575 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 ACER1Q8TDN7 264 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 DCAF4Q8WV16 495 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 DHTKD1Q96HY7 919 aaPredicted RBP16.4■□□□□ 0.22
RFTN1-203ENST00000432519 TUBGCP2Q9BSJ2 902 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 ANO3Q9BYT9 981 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 THAP9Q9H5L6 903 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 PCDHA12Q9UN75 941 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 E9PMD0 336 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 FECHP22830 423 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 CACNB1Q02641 598 aaPredicted RBP16.4■□□□□ 0.22
RFTN1-203ENST00000432519 IKQ13123 557 aaPredicted RBP16.4■□□□□ 0.22
RFTN1-203ENST00000432519 STIM1Q13586 685 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 KRT79Q5XKE5 535 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 SLC30A10Q6XR72 485 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 MTERF4Q7Z6M4 381 aaKnown RBP16.4■□□□□ 0.22
RFTN1-203ENST00000432519 CDK5RAP3Q96JB5 506 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 CNOT6LQ96LI5 555 aaKnown RBP16.4■□□□□ 0.22
RFTN1-203ENST00000432519 TFR2Q9UP52 801 aa16.4■□□□□ 0.22
RFTN1-203ENST00000432519 ATRNL1Q5VV63 1379 aa16.39■□□□□ 0.21
RFTN1-203ENST00000432519 PSMD14O00487 310 aa16.39■□□□□ 0.21
RFTN1-203ENST00000432519 CCDC175P0C221 793 aa16.39■□□□□ 0.21
RFTN1-203ENST00000432519 HOXA13P31271 388 aaPredicted RBP16.39■□□□□ 0.21
RFTN1-203ENST00000432519 MIIPQ5JXC2 388 aa16.39■□□□□ 0.21
RFTN1-203ENST00000432519 EPC1Q9H2F5 836 aa16.39■□□□□ 0.21
RFTN1-203ENST00000432519 AGPAT5Q9NUQ2 364 aa16.39■□□□□ 0.21
RFTN1-203ENST00000432519 NPHP3-ACAD11A0A0J9YXS1 232 aa16.39■□□□□ 0.21
RFTN1-203ENST00000432519 TFRCP02786 760 aaKnown RBP16.39■□□□□ 0.21
RFTN1-203ENST00000432519 EEF1GP26641 437 aaKnown RBP16.39■□□□□ 0.21
RFTN1-203ENST00000432519 RAD51AP2Q09MP3 1159 aa16.39■□□□□ 0.21
RFTN1-203ENST00000432519 FBXO38Q6PIJ6 1188 aa16.39■□□□□ 0.21
RFTN1-203ENST00000432519 ANKRD20A12PQ8NF67 263 aa16.39■□□□□ 0.21
RFTN1-203ENST00000432519 CYP2W1Q8TAV3 490 aa16.39■□□□□ 0.21
RFTN1-203ENST00000432519 CCDC94Q9BW85 323 aaPredicted RBP16.39■□□□□ 0.21
RFTN1-203ENST00000432519 CARD6Q9BX69 1037 aa16.39■□□□□ 0.21
RFTN1-203ENST00000432519 POTEB3A0JP26 581 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 POTECB2RU33 542 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 AMPD3Q01432 767 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 POTEBQ6S5H4 581 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 CRYGNQ8WXF5 182 aa16.38■□□□□ 0.21
RFTN1-203ENST00000432519 STK17AQ9UEE5 414 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms