RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 OSBPL3Q9H4L5 887 aa16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 YBX2Q9Y2T7 364 aaKnown RBP16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 SUPT16HQ9Y5B9 1047 aaKnown RBP16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 MYO9BQ13459 2157 aa16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 ZBBXA8MT70 800 aa16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 TXNP10599 105 aaKnown RBP16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 GSPT1P15170 499 aaKnown RBP16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 LY6KQ17RY6 165 aa16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 QRICH1Q2TAL8 776 aa16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 RASIP1Q5U651 963 aa16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 PSRC1Q6PGN9 363 aaPredicted RBP16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 CYB5R4Q7L1T6 521 aa16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 IQCA1Q86XH1 822 aa16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 DGKHQ86XP1 1220 aa16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 GPHNQ9NQX3 736 aaPredicted RBP16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 Q9Y3F1 56 aa16.68■□□□□ 0.26
SMARCE1-205ENST00000431889 RBM47A0AV96 593 aaKnown RBP16.67■□□□□ 0.26
SMARCE1-205ENST00000431889 CPT1AP50416 773 aa16.67■□□□□ 0.26
SMARCE1-205ENST00000431889 IMMTQ16891 758 aaKnown RBP16.67■□□□□ 0.26
SMARCE1-205ENST00000431889 GPATCH4Q5T3I0 446 aaKnown RBP16.67■□□□□ 0.26
SMARCE1-205ENST00000431889 HERVK_113Q902F9 699 aa16.67■□□□□ 0.26
SMARCE1-205ENST00000431889 MTG1Q9BT17 334 aaPredicted RBP16.67■□□□□ 0.26
SMARCE1-205ENST00000431889 TAF6LQ9Y6J9 622 aa16.67■□□□□ 0.26
SMARCE1-205ENST00000431889 CUL9Q8IWT3 2517 aa16.67■□□□□ 0.26
SMARCE1-205ENST00000431889 WDR19Q8NEZ3 1342 aa16.66■□□□□ 0.26
SMARCE1-205ENST00000431889 PCP11498 1178 aaKnown RBP16.66■□□□□ 0.26
SMARCE1-205ENST00000431889 EIF2AK2P19525 551 aaKnown RBP16.66■□□□□ 0.26
SMARCE1-205ENST00000431889 IGFBP4P22692 258 aa16.66■□□□□ 0.26
SMARCE1-205ENST00000431889 EDNRBP24530 442 aa16.66■□□□□ 0.26
SMARCE1-205ENST00000431889 TTLL4Q14679 1199 aa16.66■□□□□ 0.26
SMARCE1-205ENST00000431889 SYTL5Q8TDW5 730 aaPredicted RBP16.66■□□□□ 0.26
SMARCE1-205ENST00000431889 JMJD4Q9H9V9 463 aa16.66■□□□□ 0.26
SMARCE1-205ENST00000431889 SENP2Q9HC62 589 aa16.66■□□□□ 0.26
SMARCE1-205ENST00000431889 POLR3EQ9NVU0 708 aa16.66■□□□□ 0.26
SMARCE1-205ENST00000431889 MUC3AQ02505 3323 aa16.66■□□□□ 0.26
SMARCE1-205ENST00000431889 TRIP12Q14669 1992 aaPredicted RBP16.66■□□□□ 0.26
SMARCE1-205ENST00000431889 MYH7BA7E2Y1 1941 aa16.65■□□□□ 0.26
SMARCE1-205ENST00000431889 PARP1P09874 1014 aaKnown RBP16.65■□□□□ 0.26
SMARCE1-205ENST00000431889 ADGRE1Q14246 886 aa16.65■□□□□ 0.26
SMARCE1-205ENST00000431889 AFG1LQ8WV93 481 aa16.65■□□□□ 0.26
SMARCE1-205ENST00000431889 DSCC1Q9BVC3 393 aa16.65■□□□□ 0.26
SMARCE1-205ENST00000431889 KIAA1217Q5T5P2 1943 aa16.65■□□□□ 0.26
SMARCE1-205ENST00000431889 CFBP00751 764 aa16.64■□□□□ 0.25
SMARCE1-205ENST00000431889 PTH1RQ03431 593 aa16.64■□□□□ 0.25
SMARCE1-205ENST00000431889 IFIT1BQ5T764 474 aaKnown RBP16.64■□□□□ 0.25
SMARCE1-205ENST00000431889 FBXO11Q86XK2 927 aa16.64■□□□□ 0.25
SMARCE1-205ENST00000431889 DNERQ8NFT8 737 aa16.64■□□□□ 0.25
SMARCE1-205ENST00000431889 SCFD2Q8WU76 684 aa16.64■□□□□ 0.25
SMARCE1-205ENST00000431889 PIBF1Q8WXW3 757 aa16.64■□□□□ 0.25
SMARCE1-205ENST00000431889 RMDN3Q96TC7 470 aa16.64■□□□□ 0.25
SMARCE1-205ENST00000431889 UBAC1Q9BSL1 405 aa16.64■□□□□ 0.25
SMARCE1-205ENST00000431889 CERS4Q9HA82 394 aa16.64■□□□□ 0.25
SMARCE1-205ENST00000431889 SCN10AQ9Y5Y9 1956 aa16.64■□□□□ 0.25
SMARCE1-205ENST00000431889 BAZ2BQ9UIF8 2168 aaKnown RBP16.64■□□□□ 0.25
SMARCE1-205ENST00000431889 PPP1R11O60927 126 aaPredicted RBP16.64■□□□□ 0.25
SMARCE1-205ENST00000431889 HOMER1Q86YM7 354 aa16.64■□□□□ 0.25
SMARCE1-205ENST00000431889 MICALL1Q8N3F8 863 aa16.64■□□□□ 0.25
SMARCE1-205ENST00000431889 MSRAQ9UJ68 235 aa16.64■□□□□ 0.25
SMARCE1-205ENST00000431889 ABCB11O95342 1321 aa16.63■□□□□ 0.25
SMARCE1-205ENST00000431889 TMEM265A0A087WTH1 108 aa16.63■□□□□ 0.25
SMARCE1-205ENST00000431889 RFXAPO00287 272 aa16.63■□□□□ 0.25
SMARCE1-205ENST00000431889 HIP1O00291 1037 aa16.63■□□□□ 0.25
SMARCE1-205ENST00000431889 OPLAHO14841 1288 aa16.63■□□□□ 0.25
SMARCE1-205ENST00000431889 HOXA13P31271 388 aaPredicted RBP16.63■□□□□ 0.25
SMARCE1-205ENST00000431889 ASPRV1Q53RT3 343 aa16.63■□□□□ 0.25
SMARCE1-205ENST00000431889 ARHGEF16Q5VV41 709 aa16.63■□□□□ 0.25
SMARCE1-205ENST00000431889 TMCO2Q7Z6W1 182 aaPredicted RBP16.63■□□□□ 0.25
SMARCE1-205ENST00000431889 ANKS1AQ92625 1134 aa16.63■□□□□ 0.25
SMARCE1-205ENST00000431889 GAS2L1Q99501 681 aaPredicted RBP16.63■□□□□ 0.25
SMARCE1-205ENST00000431889 MPHOSPH6Q99547 160 aaKnown RBP16.63■□□□□ 0.25
SMARCE1-205ENST00000431889 SLC4A7Q9Y6M7 1214 aa16.63■□□□□ 0.25
SMARCE1-205ENST00000431889 TET1Q8NFU7 2136 aa16.62■□□□□ 0.25
SMARCE1-205ENST00000431889 MYCLP12524 364 aaPredicted RBP16.62■□□□□ 0.25
SMARCE1-205ENST00000431889 AAMPQ13685 434 aa16.62■□□□□ 0.25
SMARCE1-205ENST00000431889 SLC35G1Q2M3R5 365 aa16.62■□□□□ 0.25
SMARCE1-205ENST00000431889 TTC22Q5TAA0 569 aa16.62■□□□□ 0.25
SMARCE1-205ENST00000431889 CCDC62Q6P9F0 684 aa16.62■□□□□ 0.25
SMARCE1-205ENST00000431889 TICAM2Q86XR7 235 aa16.62■□□□□ 0.25
SMARCE1-205ENST00000431889 ALG1Q9BT22 464 aa16.62■□□□□ 0.25
SMARCE1-205ENST00000431889 KRT23Q9C075 422 aa16.62■□□□□ 0.25
SMARCE1-205ENST00000431889 SLC28A3Q9HAS3 691 aa16.62■□□□□ 0.25
SMARCE1-205ENST00000431889 RAD50Q92878 1312 aa16.62■□□□□ 0.25
SMARCE1-205ENST00000431889 A6NJR5 290 aa16.61■□□□□ 0.25
SMARCE1-205ENST00000431889 KLRF2D3W0D1 207 aa16.61■□□□□ 0.25
SMARCE1-205ENST00000431889 MMP3P08254 477 aa16.61■□□□□ 0.25
SMARCE1-205ENST00000431889 ZNF286BP0CG31 522 aa16.61■□□□□ 0.25
SMARCE1-205ENST00000431889 ARHGAP1Q07960 439 aa16.61■□□□□ 0.25
SMARCE1-205ENST00000431889 SEC23AQ15436 765 aa16.61■□□□□ 0.25
SMARCE1-205ENST00000431889 GDF6Q6KF10 455 aaPredicted RBP16.61■□□□□ 0.25
SMARCE1-205ENST00000431889 NSUN6Q8TEA1 469 aaKnown RBP16.61■□□□□ 0.25
SMARCE1-205ENST00000431889 FTOQ9C0B1 505 aaKnown RBP eCLIP16.61■□□□□ 0.25
SMARCE1-205ENST00000431889 CTNNA3Q9UI47 895 aa16.61■□□□□ 0.25
SMARCE1-205ENST00000431889 MAD2L2Q9UI95 211 aa16.61■□□□□ 0.25
SMARCE1-205ENST00000431889 NOD1Q9Y239 953 aa16.61■□□□□ 0.25
SMARCE1-205ENST00000431889 TANC1Q9C0D5 1861 aa16.61■□□□□ 0.25
SMARCE1-205ENST00000431889 NKRFO15226 690 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 SUPT20HL2P0C7V6 817 aa16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 ATP2A2P16615 1042 aaKnown RBP16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 RAB30Q15771 203 aa16.6■□□□□ 0.25
SMARCE1-205ENST00000431889 BRDTQ58F21 947 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms