RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 DDX49Q9Y6V7 483 aaKnown RBP20.04■□□□□ 0.8
CTDSP1-203ENST00000431127 V9GY48 417 aaPredicted RBP20.04■□□□□ 0.8
CTDSP1-203ENST00000431127 CEP290O15078 2479 aa20.03■□□□□ 0.8
CTDSP1-203ENST00000431127 MCM3APO60318 1980 aa20.03■□□□□ 0.8
CTDSP1-203ENST00000431127 hCG_1984214I3L0E3 225 aa20.03■□□□□ 0.8
CTDSP1-203ENST00000431127 PGK1P00558 417 aa20.03■□□□□ 0.8
CTDSP1-203ENST00000431127 ADCYAP1R1P41586 468 aa20.03■□□□□ 0.8
CTDSP1-203ENST00000431127 STXBP2Q15833 593 aa20.03■□□□□ 0.8
CTDSP1-203ENST00000431127 HEATR3Q7Z4Q2 680 aa20.03■□□□□ 0.8
CTDSP1-203ENST00000431127 TEX2Q8IWB9 1127 aa20.03■□□□□ 0.8
CTDSP1-203ENST00000431127 ZNF713Q8N859 430 aaPredicted RBP20.03■□□□□ 0.8
CTDSP1-203ENST00000431127 ZNF274Q96GC6 653 aaPredicted RBP20.03■□□□□ 0.8
CTDSP1-203ENST00000431127 ALDH8A1Q9H2A2 487 aaPredicted RBP20.03■□□□□ 0.8
CTDSP1-203ENST00000431127 PSTPIP2Q9H939 334 aa20.03■□□□□ 0.8
CTDSP1-203ENST00000431127 LCTP09848 1927 aa20.03■□□□□ 0.8
CTDSP1-203ENST00000431127 SYNRGQ9UMZ2 1314 aa20.02■□□□□ 0.8
CTDSP1-203ENST00000431127 hCG_1642624A0A1W2PR95 340 aa20.02■□□□□ 0.8
CTDSP1-203ENST00000431127 RBM47A0AV96 593 aaKnown RBP20.02■□□□□ 0.8
CTDSP1-203ENST00000431127 PIK3CDO00329 1044 aa20.02■□□□□ 0.8
CTDSP1-203ENST00000431127 ADAMTS4O75173 837 aa20.02■□□□□ 0.8
CTDSP1-203ENST00000431127 EIF2AK2P19525 551 aaKnown RBP20.02■□□□□ 0.8
CTDSP1-203ENST00000431127 ANKRD1Q15327 319 aa20.02■□□□□ 0.8
CTDSP1-203ENST00000431127 LENG1Q96BZ8 264 aaPredicted RBP20.02■□□□□ 0.8
CTDSP1-203ENST00000431127 TSEN34Q9BSV6 310 aaKnown RBP20.02■□□□□ 0.8
CTDSP1-203ENST00000431127 WDR11Q9BZH6 1224 aa20.02■□□□□ 0.8
CTDSP1-203ENST00000431127 SENP6Q9GZR1 1112 aaPredicted RBP20.02■□□□□ 0.8
CTDSP1-203ENST00000431127 UPF3AQ9H1J1 476 aaKnown RBP20.02■□□□□ 0.8
CTDSP1-203ENST00000431127 PDGFCQ9NRA1 345 aa20.02■□□□□ 0.8
CTDSP1-203ENST00000431127 Q9Y3F1 56 aa20.02■□□□□ 0.8
CTDSP1-203ENST00000431127 NR2E3Q9Y5X4 410 aa20.02■□□□□ 0.8
CTDSP1-203ENST00000431127 FRMPD3Q5JV73 1810 aa20.02■□□□□ 0.79
CTDSP1-203ENST00000431127 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.01■□□□□ 0.79
CTDSP1-203ENST00000431127 EIF3JO75822 258 aaKnown RBP20.01■□□□□ 0.79
CTDSP1-203ENST00000431127 NR3C2P08235 984 aa20.01■□□□□ 0.79
CTDSP1-203ENST00000431127 SMPD1P17405 629 aa20.01■□□□□ 0.79
CTDSP1-203ENST00000431127 CST5P28325 142 aaPredicted RBP20.01■□□□□ 0.79
CTDSP1-203ENST00000431127 GJA9P57773 515 aa20.01■□□□□ 0.79
CTDSP1-203ENST00000431127 DUSP28Q4G0W2 176 aa20.01■□□□□ 0.79
CTDSP1-203ENST00000431127 FCHSD1Q86WN1 690 aa20.01■□□□□ 0.79
CTDSP1-203ENST00000431127 SMARCC2Q8TAQ2 1214 aa20.01■□□□□ 0.79
CTDSP1-203ENST00000431127 SCFD2Q8WU76 684 aa20.01■□□□□ 0.79
CTDSP1-203ENST00000431127 AP5M1Q9H0R1 490 aa20.01■□□□□ 0.79
CTDSP1-203ENST00000431127 GNEQ9Y223 722 aaKnown RBP20.01■□□□□ 0.79
CTDSP1-203ENST00000431127 MOXD2PA6NHM9 499 aa20■□□□□ 0.79
CTDSP1-203ENST00000431127 NKRFO15226 690 aaKnown RBP eCLIP20■□□□□ 0.798e-13■■□□□ 12.1
CTDSP1-203ENST00000431127 ADCY6O43306 1168 aa20■□□□□ 0.79
CTDSP1-203ENST00000431127 EVI5O60447 810 aa20■□□□□ 0.79
CTDSP1-203ENST00000431127 C6orf222P0C671 652 aaPredicted RBP20■□□□□ 0.79
CTDSP1-203ENST00000431127 NKX3-2P78367 333 aa20■□□□□ 0.79
CTDSP1-203ENST00000431127 AKAP17AQ02040 695 aaKnown RBP20■□□□□ 0.79
CTDSP1-203ENST00000431127 PPP1R18Q6NYC8 613 aa20■□□□□ 0.79
CTDSP1-203ENST00000431127 CHRDL2Q6WN34 429 aa20■□□□□ 0.79
CTDSP1-203ENST00000431127 TLK2Q86UE8 772 aa20■□□□□ 0.79
CTDSP1-203ENST00000431127 PCSK9Q8NBP7 692 aaKnown RBP20■□□□□ 0.79
CTDSP1-203ENST00000431127 KLHDC9Q8NEP7 349 aa20■□□□□ 0.79
CTDSP1-203ENST00000431127 PDCD2LQ9BRP1 358 aa20■□□□□ 0.79
CTDSP1-203ENST00000431127 PHF24Q9UPV7 400 aa20■□□□□ 0.79
CTDSP1-203ENST00000431127 MEIS2O14770 477 aa19.99■□□□□ 0.79
CTDSP1-203ENST00000431127 PRPF3O43395 683 aaKnown RBP19.99■□□□□ 0.79
CTDSP1-203ENST00000431127 IFNAR1P17181 557 aa19.99■□□□□ 0.79
CTDSP1-203ENST00000431127 NAPAP54920 295 aa19.99■□□□□ 0.79
CTDSP1-203ENST00000431127 CCT2P78371 535 aaKnown RBP19.99■□□□□ 0.79
CTDSP1-203ENST00000431127 TTLL4Q14679 1199 aa19.99■□□□□ 0.79
CTDSP1-203ENST00000431127 PFKFB3Q16875 520 aaPredicted RBP19.99■□□□□ 0.79
CTDSP1-203ENST00000431127 GNASQ5JWF2 1037 aa19.99■□□□□ 0.79
CTDSP1-203ENST00000431127 WWC2Q6AWC2 1192 aa19.99■□□□□ 0.79
CTDSP1-203ENST00000431127 CPLX2Q6PUV4 134 aaKnown RBP19.99■□□□□ 0.79
CTDSP1-203ENST00000431127 GPKOWQ92917 476 aaPredicted RBP eCLIP19.99■□□□□ 0.79
CTDSP1-203ENST00000431127 GLT8D2Q9H1C3 349 aa19.99■□□□□ 0.79
CTDSP1-203ENST00000431127 BARHL2Q9NY43 387 aa19.99■□□□□ 0.79
CTDSP1-203ENST00000431127 CPLX1O14810 134 aa19.98■□□□□ 0.79
CTDSP1-203ENST00000431127 DYNC1LI2O43237 492 aaPredicted RBP19.98■□□□□ 0.79
CTDSP1-203ENST00000431127 SCG2P13521 617 aa19.98■□□□□ 0.79
CTDSP1-203ENST00000431127 CCND2P30279 289 aa19.98■□□□□ 0.79
CTDSP1-203ENST00000431127 PGM5Q15124 567 aa19.98■□□□□ 0.79
CTDSP1-203ENST00000431127 KCNA10Q16322 511 aa19.98■□□□□ 0.79
CTDSP1-203ENST00000431127 USP17L6PQ6QN14 398 aa19.98■□□□□ 0.79
CTDSP1-203ENST00000431127 VSIG10LQ86VR7 867 aa19.98■□□□□ 0.79
CTDSP1-203ENST00000431127 RNF26Q9BY78 433 aaPredicted RBP19.98■□□□□ 0.79
CTDSP1-203ENST00000431127 LRRC37A2A6NM11 1700 aa19.97■□□□□ 0.79
CTDSP1-203ENST00000431127 ZEB2O60315 1214 aa19.97■□□□□ 0.79
CTDSP1-203ENST00000431127 TXNP10599 105 aaKnown RBP19.97■□□□□ 0.79
CTDSP1-203ENST00000431127 MYCLP12524 364 aaPredicted RBP19.97■□□□□ 0.79
CTDSP1-203ENST00000431127 ACLYP53396 1101 aa19.97■□□□□ 0.79
CTDSP1-203ENST00000431127 NTRK3Q16288 839 aa19.97■□□□□ 0.79
CTDSP1-203ENST00000431127 CCSAPQ6IQ19 270 aaPredicted RBP19.97■□□□□ 0.79
CTDSP1-203ENST00000431127 XRRA1Q6P2D8 792 aa19.97■□□□□ 0.79
CTDSP1-203ENST00000431127 SEPT14Q6ZU15 432 aa19.97■□□□□ 0.79
CTDSP1-203ENST00000431127 TRIM22Q8IYM9 498 aa19.97■□□□□ 0.79
CTDSP1-203ENST00000431127 CCDC12Q8WUD4 166 aaPredicted RBP19.97■□□□□ 0.79
CTDSP1-203ENST00000431127 LARP6Q9BRS8 491 aaKnown RBP19.97■□□□□ 0.79
CTDSP1-203ENST00000431127 UPF2Q9HAU5 1272 aaKnown RBP19.97■□□□□ 0.79
CTDSP1-203ENST00000431127 NCOA5Q9HCD5 579 aaKnown RBP19.97■□□□□ 0.79
CTDSP1-203ENST00000431127 FRMPD4Q14CM0 1322 aa19.97■□□□□ 0.79
CTDSP1-203ENST00000431127 STXBP3O00186 592 aa19.96■□□□□ 0.79
CTDSP1-203ENST00000431127 STAM2O75886 525 aa19.96■□□□□ 0.79
CTDSP1-203ENST00000431127 NEK4P51957 841 aa19.96■□□□□ 0.79
CTDSP1-203ENST00000431127 FSCN1Q16658 493 aaKnown RBP19.96■□□□□ 0.79
CTDSP1-203ENST00000431127 BRDTQ58F21 947 aaPredicted RBP19.96■□□□□ 0.79
CTDSP1-203ENST00000431127 KCNV1Q6PIU1 500 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms