RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 FOXP2O15409 715 aa26.07■■□□□ 1.76
PTPRA-207ENST00000431048 ORC4O43929 436 aa26.07■■□□□ 1.76
PTPRA-207ENST00000431048 GPR37L1O60883 481 aa26.07■■□□□ 1.76
PTPRA-207ENST00000431048 SLC16A2P36021 539 aa26.07■■□□□ 1.76
PTPRA-207ENST00000431048 CTDSPL2Q05D32 466 aa26.07■■□□□ 1.76
PTPRA-207ENST00000431048 DNERQ8NFT8 737 aa26.07■■□□□ 1.76
PTPRA-207ENST00000431048 RANBP6O60518 1105 aaKnown RBP26.06■■□□□ 1.76
PTPRA-207ENST00000431048 PDE4DQ08499 809 aa26.06■■□□□ 1.76
PTPRA-207ENST00000431048 RNF207Q6ZRF8 634 aa26.06■■□□□ 1.76
PTPRA-207ENST00000431048 CAGE1Q8TC20 777 aa26.06■■□□□ 1.76
PTPRA-207ENST00000431048 PI4K2BQ8TCG2 481 aa26.06■■□□□ 1.76
PTPRA-207ENST00000431048 CALML3P27482 149 aa26.05■■□□□ 1.76
PTPRA-207ENST00000431048 SLC30A10Q6XR72 485 aa26.05■■□□□ 1.76
PTPRA-207ENST00000431048 CCDC155Q8N6L0 562 aa26.05■■□□□ 1.76
PTPRA-207ENST00000431048 AFAP1L1Q8TED9 768 aa26.05■■□□□ 1.76
PTPRA-207ENST00000431048 FSD1Q9BTV5 496 aa26.05■■□□□ 1.76
PTPRA-207ENST00000431048 MTMR7Q9Y216 660 aa26.05■■□□□ 1.76
PTPRA-207ENST00000431048 B4DLN1 442 aa26.04■■□□□ 1.76
PTPRA-207ENST00000431048 TOP1P11387 765 aaKnown RBP26.04■■□□□ 1.76
PTPRA-207ENST00000431048 KCNJ6P48051 423 aa26.04■■□□□ 1.76
PTPRA-207ENST00000431048 MRPL12P52815 198 aaKnown RBP26.04■■□□□ 1.76
PTPRA-207ENST00000431048 RPS6P62753 249 aaKnown RBP26.04■■□□□ 1.76
PTPRA-207ENST00000431048 SESTD1Q86VW0 696 aa26.04■■□□□ 1.76
PTPRA-207ENST00000431048 TET1Q8NFU7 2136 aa26.04■■□□□ 1.76
PTPRA-207ENST00000431048 COPS5Q92905 334 aa26.04■■□□□ 1.76
PTPRA-207ENST00000431048 TCP11L1Q9NUJ3 509 aa26.04■■□□□ 1.76
PTPRA-207ENST00000431048 NOD1Q9Y239 953 aa26.04■■□□□ 1.76
PTPRA-207ENST00000431048 PARNO95453 639 aaKnown RBP26.03■■□□□ 1.76
PTPRA-207ENST00000431048 TXNP10599 105 aaKnown RBP26.03■■□□□ 1.76
PTPRA-207ENST00000431048 GPNMBQ14956 572 aa26.03■■□□□ 1.76
PTPRA-207ENST00000431048 ALX1Q15699 326 aa26.03■■□□□ 1.76
PTPRA-207ENST00000431048 C20orf194Q5TEA3 1177 aa26.03■■□□□ 1.76
PTPRA-207ENST00000431048 RGS22Q8NE09 1264 aa26.03■■□□□ 1.76
PTPRA-207ENST00000431048 TMEM47Q9BQJ4 181 aa26.03■■□□□ 1.76
PTPRA-207ENST00000431048 MAF1Q9H063 256 aa26.03■■□□□ 1.76
PTPRA-207ENST00000431048 RCAN3Q9UKA8 241 aa26.03■■□□□ 1.76
PTPRA-207ENST00000431048 WDR19Q8NEZ3 1342 aa26.03■■□□□ 1.76
PTPRA-207ENST00000431048 TANC1Q9C0D5 1861 aa26.02■■□□□ 1.76
PTPRA-207ENST00000431048 PI4K2BG5E9Z4 385 aa26.02■■□□□ 1.76
PTPRA-207ENST00000431048 WDR5P61964 334 aaKnown RBP26.02■■□□□ 1.76
PTPRA-207ENST00000431048 RBL2Q08999 1139 aa26.02■■□□□ 1.76
PTPRA-207ENST00000431048 PTGISQ16647 500 aa26.02■■□□□ 1.76
PTPRA-207ENST00000431048 PPP1R13LQ8WUF5 828 aa26.02■■□□□ 1.76
PTPRA-207ENST00000431048 CTAGE1Q96RT6 745 aa26.02■■□□□ 1.76
PTPRA-207ENST00000431048 C11orf16Q9NQ32 467 aa26.02■■□□□ 1.76
PTPRA-207ENST00000431048 CCDC62Q6P9F0 684 aa26.01■■□□□ 1.75
PTPRA-207ENST00000431048 GPCPD1Q9NPB8 672 aa26.01■■□□□ 1.75
PTPRA-207ENST00000431048 CXCL10P02778 98 aa26■■□□□ 1.75
PTPRA-207ENST00000431048 SELPP16109 830 aa26■■□□□ 1.75
PTPRA-207ENST00000431048 SPRED2Q7Z698 418 aa26■■□□□ 1.75
PTPRA-207ENST00000431048 MIER1Q8N108 512 aa26■■□□□ 1.75
PTPRA-207ENST00000431048 KHSRPQ92945 711 aaKnown RBP eCLIP26■■□□□ 1.751e-7■■■■□ 24.1
PTPRA-207ENST00000431048 FRMPD2Q68DX3 1309 aaPredicted RBP25.99■■□□□ 1.75
PTPRA-207ENST00000431048 LCHNA4D1U4 455 aa25.99■■□□□ 1.75
PTPRA-207ENST00000431048 ARIH2O95376 493 aa25.99■■□□□ 1.75
PTPRA-207ENST00000431048 PDHBP11177 359 aa25.99■■□□□ 1.75
PTPRA-207ENST00000431048 ERVK-21P61565 698 aa25.99■■□□□ 1.75
PTPRA-207ENST00000431048 CNKSR3Q6P9H4 555 aa25.99■■□□□ 1.75
PTPRA-207ENST00000431048 RAD9AQ99638 391 aa25.99■■□□□ 1.75
PTPRA-207ENST00000431048 ZBED2Q9BTP6 218 aa25.99■■□□□ 1.75
PTPRA-207ENST00000431048 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.98■■□□□ 1.75
PTPRA-207ENST00000431048 ABHD14A-ACY1A0A1B0GW23 586 aa25.98■■□□□ 1.75
PTPRA-207ENST00000431048 ZNF543Q08ER8 600 aa25.98■■□□□ 1.75
PTPRA-207ENST00000431048 GDF6Q6KF10 455 aaPredicted RBP25.98■■□□□ 1.75
PTPRA-207ENST00000431048 LRRC8DQ7L1W4 858 aa25.98■■□□□ 1.75
PTPRA-207ENST00000431048 TTC14Q96N46 770 aa25.98■■□□□ 1.75
PTPRA-207ENST00000431048 BRWD1Q9NSI6 2320 aa25.98■■□□□ 1.75
PTPRA-207ENST00000431048 PIEZO1Q92508 2521 aa25.97■■□□□ 1.75
PTPRA-207ENST00000431048 EFCAB14O75071 495 aa25.97■■□□□ 1.75
PTPRA-207ENST00000431048 GJB5O95377 273 aa25.97■■□□□ 1.75
PTPRA-207ENST00000431048 SNHG28P0DPA3 235 aa25.97■■□□□ 1.75
PTPRA-207ENST00000431048 VPS53Q5VIR6 699 aa25.97■■□□□ 1.75
PTPRA-207ENST00000431048 AFG1LQ8WV93 481 aa25.97■■□□□ 1.75
PTPRA-207ENST00000431048 DHX38Q92620 1227 aaKnown RBP25.97■■□□□ 1.75
PTPRA-207ENST00000431048 KAT2BQ92831 832 aa25.97■■□□□ 1.75
PTPRA-207ENST00000431048 TGS1Q96RS0 853 aaKnown RBP25.97■■□□□ 1.75
PTPRA-207ENST00000431048 SUGCTQ9HAC7 445 aa25.97■■□□□ 1.75
PTPRA-207ENST00000431048 CD320Q9NPF0 282 aa25.97■■□□□ 1.75
PTPRA-207ENST00000431048 TRIP12Q14669 1992 aaPredicted RBP25.96■■□□□ 1.75
PTPRA-207ENST00000431048 GH1P01241 217 aa25.96■■□□□ 1.75
PTPRA-207ENST00000431048 MMP3P08254 477 aa25.96■■□□□ 1.75
PTPRA-207ENST00000431048 DEFB103AP81534 67 aa25.96■■□□□ 1.75
PTPRA-207ENST00000431048 GDPD5Q8WTR4 605 aa25.96■■□□□ 1.75
PTPRA-207ENST00000431048 PTPRSQ13332 1948 aa25.95■■□□□ 1.74
PTPRA-207ENST00000431048 NBNO60934 754 aa25.95■■□□□ 1.74
PTPRA-207ENST00000431048 CASTP20810 708 aaKnown RBP25.95■■□□□ 1.74
PTPRA-207ENST00000431048 ARHGAP1Q07960 439 aa25.95■■□□□ 1.74
PTPRA-207ENST00000431048 LEXMQ3ZCV2 418 aa25.95■■□□□ 1.74
PTPRA-207ENST00000431048 OTUD7AQ8TE49 926 aaPredicted RBP25.95■■□□□ 1.74
PTPRA-207ENST00000431048 UBE2ZQ9H832 354 aaPredicted RBP25.95■■□□□ 1.74
PTPRA-207ENST00000431048 HELLSQ9NRZ9 838 aa25.95■■□□□ 1.74
PTPRA-207ENST00000431048 FGAP02671 866 aa25.94■■□□□ 1.74
PTPRA-207ENST00000431048 CKBP12277 381 aa25.94■■□□□ 1.74
PTPRA-207ENST00000431048 TMCO2Q7Z6W1 182 aaPredicted RBP25.94■■□□□ 1.74
PTPRA-207ENST00000431048 TOMM22Q9NS69 142 aa25.94■■□□□ 1.74
PTPRA-207ENST00000431048 GTF2IRD1Q9UHL9 959 aa25.94■■□□□ 1.74
PTPRA-207ENST00000431048 LINC01553A4QN01 128 aa25.93■■□□□ 1.74
PTPRA-207ENST00000431048 MX1P20591 662 aa25.93■■□□□ 1.74
PTPRA-207ENST00000431048 CHMP4BP1P59074 171 aa25.93■■□□□ 1.74
PTPRA-207ENST00000431048 FAM178BQ8IXR5 827 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms