RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 TCEANC2Q96MN5 208 aa11.36□□□□□ -0.59
HDAC6-207ENST00000430858 PRO3102Q9H379 93 aa11.36□□□□□ -0.59
HDAC6-207ENST00000430858 RBM28Q9NW13 759 aaKnown RBP11.36□□□□□ -0.59
HDAC6-207ENST00000430858 PRKAG2Q9UGJ0 569 aa11.36□□□□□ -0.59
HDAC6-207ENST00000430858 SEC63Q9UGP8 760 aaKnown RBP11.36□□□□□ -0.59
HDAC6-207ENST00000430858 SNX14Q9Y5W7 946 aa11.36□□□□□ -0.59
HDAC6-207ENST00000430858 CABYRO75952 493 aa11.35□□□□□ -0.59
HDAC6-207ENST00000430858 PLEKHA8P1O95397 391 aa11.35□□□□□ -0.59
HDAC6-207ENST00000430858 PSMA5P28066 241 aa11.35□□□□□ -0.59
HDAC6-207ENST00000430858 BMP8BP34820 402 aa11.35□□□□□ -0.59
HDAC6-207ENST00000430858 IRX5P78411 483 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-207ENST00000430858 FGD1P98174 961 aa11.35□□□□□ -0.59
HDAC6-207ENST00000430858 TTLL4Q14679 1199 aa11.35□□□□□ -0.59
HDAC6-207ENST00000430858 PPP2R5BQ15173 497 aa11.35□□□□□ -0.59
HDAC6-207ENST00000430858 STXBP2Q15833 593 aa11.35□□□□□ -0.59
HDAC6-207ENST00000430858 FSCN1Q16658 493 aaKnown RBP11.35□□□□□ -0.59
HDAC6-207ENST00000430858 BLOC1S2Q6QNY1 142 aa11.35□□□□□ -0.59
HDAC6-207ENST00000430858 TMTC3Q6ZXV5 915 aa11.35□□□□□ -0.59
HDAC6-207ENST00000430858 PIBF1Q8WXW3 757 aa11.35□□□□□ -0.59
HDAC6-207ENST00000430858 JAKMIP1Q96N16 626 aaKnown RBP11.35□□□□□ -0.59
HDAC6-207ENST00000430858 GDF15Q99988 308 aa11.35□□□□□ -0.59
HDAC6-207ENST00000430858 PXMP2Q9NR77 195 aa11.35□□□□□ -0.59
HDAC6-207ENST00000430858 RBM27Q9P2N5 1060 aaKnown RBP11.35□□□□□ -0.59
HDAC6-207ENST00000430858 MCM3APO60318 1980 aa11.35□□□□□ -0.59
HDAC6-207ENST00000430858 LCTP09848 1927 aa11.35□□□□□ -0.59
HDAC6-207ENST00000430858 ALPK3Q96L96 1907 aa11.35□□□□□ -0.59
HDAC6-207ENST00000430858 A0A0U1RQG5 324 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-207ENST00000430858 A0A1W2PPC1 479 aa11.34□□□□□ -0.59
HDAC6-207ENST00000430858 ZBTB43O43298 467 aa11.34□□□□□ -0.59
HDAC6-207ENST00000430858 EIF3JO75822 258 aaKnown RBP11.34□□□□□ -0.59
HDAC6-207ENST00000430858 NR3C2P08235 984 aa11.34□□□□□ -0.59
HDAC6-207ENST00000430858 EIF2AK2P19525 551 aaKnown RBP11.34□□□□□ -0.59
HDAC6-207ENST00000430858 HOXA13P31271 388 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-207ENST00000430858 RCAN1P53805 252 aa11.34□□□□□ -0.59
HDAC6-207ENST00000430858 BEX3Q00994 111 aa11.34□□□□□ -0.59
HDAC6-207ENST00000430858 TLE2Q04725 743 aa11.34□□□□□ -0.59
HDAC6-207ENST00000430858 RTN1Q16799 776 aa11.34□□□□□ -0.59
HDAC6-207ENST00000430858 TMEM63BQ5T3F8 832 aa11.34□□□□□ -0.59
HDAC6-207ENST00000430858 ANKRD33Q7Z3H0 272 aa11.34□□□□□ -0.59
HDAC6-207ENST00000430858 RAB11FIP4Q86YS3 637 aa11.34□□□□□ -0.59
HDAC6-207ENST00000430858 FBXL16Q8N461 479 aa11.34□□□□□ -0.59
HDAC6-207ENST00000430858 VTI1AQ96AJ9 217 aa11.34□□□□□ -0.59
HDAC6-207ENST00000430858 TOX2Q96NM4 488 aa11.34□□□□□ -0.59
HDAC6-207ENST00000430858 PDCD2LQ9BRP1 358 aa11.34□□□□□ -0.59
HDAC6-207ENST00000430858 BRPF3Q9ULD4 1205 aa11.34□□□□□ -0.59
HDAC6-207ENST00000430858 MROH7Q68CQ1 1323 aa11.34□□□□□ -0.59
HDAC6-207ENST00000430858 LRRC37A2A6NM11 1700 aa11.33□□□□□ -0.6
HDAC6-207ENST00000430858 KLF18A0A0U1RQI7 1052 aa11.33□□□□□ -0.6
HDAC6-207ENST00000430858 DCDC2CA8MYV0 355 aa11.33□□□□□ -0.6
HDAC6-207ENST00000430858 ARVCFO00192 962 aa11.33□□□□□ -0.6
HDAC6-207ENST00000430858 PQBP1O60828 265 aaKnown RBP11.33□□□□□ -0.6
HDAC6-207ENST00000430858 TXNP10599 105 aaKnown RBP11.33□□□□□ -0.6
HDAC6-207ENST00000430858 PTGS1P23219 599 aa11.33□□□□□ -0.6
HDAC6-207ENST00000430858 RPS6KB1P23443 525 aa11.33□□□□□ -0.6
HDAC6-207ENST00000430858 MAGEA10P43363 369 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-207ENST00000430858 CPT1AP50416 773 aa11.33□□□□□ -0.6
HDAC6-207ENST00000430858 MAPK8IP2Q13387 824 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-207ENST00000430858 BRDTQ58F21 947 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-207ENST00000430858 CXCL17Q6UXB2 119 aa11.33□□□□□ -0.6
HDAC6-207ENST00000430858 CMTR1Q8N1G2 835 aaKnown RBP11.33□□□□□ -0.6
HDAC6-207ENST00000430858 CCDC82Q8N4S0 544 aa11.33□□□□□ -0.6
HDAC6-207ENST00000430858 OR6J1Q8NGC5 347 aa11.33□□□□□ -0.6
HDAC6-207ENST00000430858 CUL5Q93034 780 aa11.33□□□□□ -0.6
HDAC6-207ENST00000430858 LBHD1Q9BQE6 289 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-207ENST00000430858 USP26Q9BXU7 913 aa11.33□□□□□ -0.6
HDAC6-207ENST00000430858 SEZ6LQ9BYH1 1024 aa11.33□□□□□ -0.6
HDAC6-207ENST00000430858 PRDM5Q9NQX1 630 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-207ENST00000430858 CCDC196A0A1B0GTZ2 297 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 GOLGA8AA7E2F4 631 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 GOLGA8BA8MQT2 603 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 PIK3CDO00329 1044 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 CLTBP09497 229 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 CPA1P15085 419 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 CASTP20810 708 aaKnown RBP11.32□□□□□ -0.6
HDAC6-207ENST00000430858 CDK7P50613 346 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 PGM5Q15124 567 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 CCDC62Q6P9F0 684 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 SEPT14Q6ZU15 432 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 Q6ZUG5 572 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 VSIG10LQ86VR7 867 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 FCHSD1Q86WN1 690 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 SMARCC2Q8TAQ2 1214 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 BRF1Q92994 677 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 AGXT2Q9BYV1 514 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 PDLIM7Q9NR12 457 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 POLR3EQ9NVU0 708 aa11.32□□□□□ -0.6
HDAC6-207ENST00000430858 TRIM43BA6NCK2 446 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 A6NJR5 290 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 KIAA0355O15063 1070 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 KPNA6O60684 536 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 EIF5BO60841 1220 aaKnown RBP11.31□□□□□ -0.6
HDAC6-207ENST00000430858 ARIH2O95376 493 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 GH1P01241 217 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 MYCLP12524 364 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-207ENST00000430858 CCND2P30279 289 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 METAP2P50579 478 aaKnown RBP eCLIP11.31□□□□□ -0.6
HDAC6-207ENST00000430858 MDM2Q00987 491 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-207ENST00000430858 FAAP100Q0VG06 881 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 ITGA7Q13683 1181 aa11.31□□□□□ -0.6
HDAC6-207ENST00000430858 KCNV1Q6PIU1 500 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms