RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 PRPF38AQ8NAV1 312 aaKnown RBP16.11■□□□□ 0.17
CALD1-207ENST00000430085 TANGO6Q9C0B7 1094 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 RMND1Q9NWS8 449 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 POLR2AP24928 1970 aaKnown RBP16.11■□□□□ 0.17
CALD1-207ENST00000430085 ABCB11O95342 1321 aa16.11■□□□□ 0.17
CALD1-207ENST00000430085 CYP3A7-CYP3A51PA0A087WV96 503 aa16.1■□□□□ 0.17
CALD1-207ENST00000430085 CFBP00751 764 aa16.1■□□□□ 0.17
CALD1-207ENST00000430085 MYL1P05976 194 aa16.1■□□□□ 0.17
CALD1-207ENST00000430085 CYP3A7P24462 503 aa16.1■□□□□ 0.17
CALD1-207ENST00000430085 CDC25BP30305 580 aa16.1■□□□□ 0.17
CALD1-207ENST00000430085 SREBF1P36956 1147 aa16.1■□□□□ 0.17
CALD1-207ENST00000430085 ZKSCAN4Q969J2 545 aaPredicted RBP16.1■□□□□ 0.17
CALD1-207ENST00000430085 MRFAP1L1Q96HT8 127 aa16.1■□□□□ 0.17
CALD1-207ENST00000430085 CDK5RAP3Q96JB5 506 aa16.1■□□□□ 0.17
CALD1-207ENST00000430085 MTRQ99707 1265 aa16.1■□□□□ 0.17
CALD1-207ENST00000430085 PITPNM2Q9BZ72 1349 aa16.1■□□□□ 0.17
CALD1-207ENST00000430085 GCOM1H8Y6P7 765 aaPredicted RBP16.09■□□□□ 0.17
CALD1-207ENST00000430085 TPM3P06753 285 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 POLR2MP0CAP2 368 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 SPP2Q13103 211 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 CT47A1Q5JQC4 288 aaPredicted RBP16.09■□□□□ 0.17
CALD1-207ENST00000430085 KRT79Q5XKE5 535 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 FCHSD1Q86WN1 690 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 LDHDQ86WU2 507 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 HAS1Q92839 578 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 WDR18Q9BV38 432 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 PCDHA12Q9UN75 941 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 POTEMA6NI47 508 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 RPN1P04843 607 aaKnown RBP16.09■□□□□ 0.17
CALD1-207ENST00000430085 ICAM1P05362 532 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 PTPRAP18433 802 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 SLFN12Q8IYM2 578 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 CRYGNQ8WXF5 182 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 P2RX7Q99572 595 aaKnown RBP16.09■□□□□ 0.17
CALD1-207ENST00000430085 MMTAG2Q9BU76 263 aaKnown RBP16.09■□□□□ 0.17
CALD1-207ENST00000430085 EHMT1Q9H9B1 1298 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 KBTBD4Q9NVX7 518 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 CCPG1Q9ULG6 757 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 CLEC11AQ9Y240 323 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 ZKSCAN5Q9Y2L8 839 aa16.09■□□□□ 0.17
CALD1-207ENST00000430085 FLOT1O75955 427 aa16.08■□□□□ 0.16
CALD1-207ENST00000430085 VCAM1P19320 739 aa16.08■□□□□ 0.16
CALD1-207ENST00000430085 ERCC5P28715 1186 aaPredicted RBP16.08■□□□□ 0.16
CALD1-207ENST00000430085 PRR16Q569H4 304 aa16.08■□□□□ 0.16
CALD1-207ENST00000430085 ZNF280CQ8ND82 737 aa16.08■□□□□ 0.16
CALD1-207ENST00000430085 SNX29Q8TEQ0 813 aa16.08■□□□□ 0.16
CALD1-207ENST00000430085 MBOAT7Q96N66 472 aa16.08■□□□□ 0.16
CALD1-207ENST00000430085 CTDP1Q9Y5B0 961 aaPredicted RBP16.08■□□□□ 0.16
CALD1-207ENST00000430085 ZNF76P36508 570 aa16.07■□□□□ 0.16
CALD1-207ENST00000430085 BACE1P56817 501 aa16.07■□□□□ 0.16
CALD1-207ENST00000430085 AMPD3Q01432 767 aa16.07■□□□□ 0.16
CALD1-207ENST00000430085 DGKZQ13574 1117 aa16.07■□□□□ 0.16
CALD1-207ENST00000430085 Q4G0T1 1027 aa16.07■□□□□ 0.16
CALD1-207ENST00000430085 ENOX1Q8TC92 643 aaKnown RBP16.07■□□□□ 0.16
CALD1-207ENST00000430085 DCPSQ96C86 337 aaKnown RBP16.07■□□□□ 0.16
CALD1-207ENST00000430085 KLRG1Q96E93 195 aa16.07■□□□□ 0.16
CALD1-207ENST00000430085 RPAP3Q9H6T3 665 aaPredicted RBP16.07■□□□□ 0.16
CALD1-207ENST00000430085 KCNMB3Q9NPA1 279 aa16.07■□□□□ 0.16
CALD1-207ENST00000430085 RRAGDQ9NQL2 400 aaPredicted RBP16.07■□□□□ 0.16
CALD1-207ENST00000430085 EMILIN3Q9NT22 766 aa16.07■□□□□ 0.16
CALD1-207ENST00000430085 STK17AQ9UEE5 414 aa16.07■□□□□ 0.16
CALD1-207ENST00000430085 FZD1Q9UP38 647 aa16.07■□□□□ 0.16
CALD1-207ENST00000430085 FMR1Q06787 632 aaKnown RBP eCLIP16.07■□□□□ 0.16
CALD1-207ENST00000430085 CCDC47Q96A33 483 aaKnown RBP16.07■□□□□ 0.16
CALD1-207ENST00000430085 AGBL1Q96MI9 1066 aa16.07■□□□□ 0.16
CALD1-207ENST00000430085 FANCLQ9NW38 375 aa16.07■□□□□ 0.16
CALD1-207ENST00000430085 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.07■□□□□ 0.16
CALD1-207ENST00000430085 ZHX2Q9Y6X8 837 aa16.07■□□□□ 0.16
CALD1-207ENST00000430085 TBX3O15119 743 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 CYP3A4P08684 503 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 CIITAP33076 1130 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 ZNF658Q5TYW1 1059 aaPredicted RBP16.06■□□□□ 0.16
CALD1-207ENST00000430085 KLHL10Q6JEL2 608 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 SULF1Q8IWU6 871 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 GJA10Q969M2 543 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 RTN4Q9NQC3 1192 aaKnown RBP16.06■□□□□ 0.16
CALD1-207ENST00000430085 IFNKQ9P0W0 207 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 PPP1R9AQ9ULJ8 1098 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 NFE2L3Q9Y4A8 694 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 SERPINC1P01008 464 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 FANCCQ00597 558 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 SEMA3FQ13275 785 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 GRB10Q13322 594 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 PRKG1Q13976 671 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 MAP1SQ66K74 1059 aaPredicted RBP16.06■□□□□ 0.16
CALD1-207ENST00000430085 SV2BQ7L1I2 683 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 TRMT44Q8IYL2 757 aaKnown RBP16.06■□□□□ 0.16
CALD1-207ENST00000430085 SMYD4Q8IYR2 804 aaPredicted RBP16.06■□□□□ 0.16
CALD1-207ENST00000430085 CPXCR1Q8N123 301 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 ZC3H15Q8WU90 426 aaKnown RBP16.06■□□□□ 0.16
CALD1-207ENST00000430085 TBC1D5Q92609 795 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 HSD3B7Q9H2F3 369 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 SLC38A10Q9HBR0 1119 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 PNMA2Q9UL42 364 aa16.06■□□□□ 0.16
CALD1-207ENST00000430085 SYNRGQ9UMZ2 1314 aa16.05■□□□□ 0.16
CALD1-207ENST00000430085 SSC5DA1L4H1 1573 aa16.05■□□□□ 0.16
CALD1-207ENST00000430085 C19orf81C9J6K1 198 aa16.05■□□□□ 0.16
CALD1-207ENST00000430085 FAM86B1E9PN63 330 aa16.05■□□□□ 0.16
CALD1-207ENST00000430085 ZBED4O75132 1171 aa16.05■□□□□ 0.16
CALD1-207ENST00000430085 FAM86B2P0C5J1 330 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms