RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 PNMA2Q9UL42 364 aa19.69■□□□□ 0.74
UBE3D-204ENST00000430071 A0A0U1RQG5 324 aaPredicted RBP19.68■□□□□ 0.74
UBE3D-204ENST00000430071 EIF5BO60841 1220 aaKnown RBP19.68■□□□□ 0.74
UBE3D-204ENST00000430071 RAG1P15918 1043 aa19.68■□□□□ 0.74
UBE3D-204ENST00000430071 PDE4DQ08499 809 aa19.68■□□□□ 0.74
UBE3D-204ENST00000430071 KRT32Q14532 448 aa19.68■□□□□ 0.74
UBE3D-204ENST00000430071 TMEM67Q5HYA8 995 aa19.68■□□□□ 0.74
UBE3D-204ENST00000430071 DNERQ8NFT8 737 aa19.68■□□□□ 0.74
UBE3D-204ENST00000430071 TOX2Q96NM4 488 aa19.68■□□□□ 0.74
UBE3D-204ENST00000430071 LY9Q9HBG7 655 aa19.68■□□□□ 0.74
UBE3D-204ENST00000430071 TBX21Q9UL17 535 aa19.68■□□□□ 0.74
UBE3D-204ENST00000430071 TET1Q8NFU7 2136 aa19.67■□□□□ 0.74
UBE3D-204ENST00000430071 DCDC2CA8MYV0 355 aa19.67■□□□□ 0.74
UBE3D-204ENST00000430071 HOMER1Q86YM7 354 aa19.67■□□□□ 0.74
UBE3D-204ENST00000430071 FAM126BQ8IXS8 530 aa19.67■□□□□ 0.74
UBE3D-204ENST00000430071 SLC43A3Q8NBI5 491 aa19.67■□□□□ 0.74
UBE3D-204ENST00000430071 PIBF1Q8WXW3 757 aa19.67■□□□□ 0.74
UBE3D-204ENST00000430071 NEK1Q96PY6 1258 aa19.67■□□□□ 0.74
UBE3D-204ENST00000430071 RIOX1Q9H6W3 641 aa19.67■□□□□ 0.74
UBE3D-204ENST00000430071 Q9Y3F1 56 aa19.67■□□□□ 0.74
UBE3D-204ENST00000430071 LOC102724159A0A0B4J2E5 919 aa19.66■□□□□ 0.74
UBE3D-204ENST00000430071 ZBTB5O15062 677 aa19.66■□□□□ 0.74
UBE3D-204ENST00000430071 CFBP00751 764 aa19.66■□□□□ 0.74
UBE3D-204ENST00000430071 PWP2Q15269 919 aaKnown RBP19.66■□□□□ 0.74
UBE3D-204ENST00000430071 RAB11FIP4Q86YS3 637 aa19.66■□□□□ 0.74
UBE3D-204ENST00000430071 JAKMIP1Q96N16 626 aaKnown RBP19.66■□□□□ 0.74
UBE3D-204ENST00000430071 LRRC2Q9BYS8 371 aa19.66■□□□□ 0.74
UBE3D-204ENST00000430071 MRPL11Q9Y3B7 192 aaKnown RBP19.66■□□□□ 0.74
UBE3D-204ENST00000430071 ERICH2A1L162 156 aa19.65■□□□□ 0.74
UBE3D-204ENST00000430071 PRC1O43663 620 aa19.65■□□□□ 0.74
UBE3D-204ENST00000430071 CD4P01730 458 aa19.65■□□□□ 0.74
UBE3D-204ENST00000430071 CPA1P15085 419 aa19.65■□□□□ 0.74
UBE3D-204ENST00000430071 EIF2AK2P19525 551 aaKnown RBP19.65■□□□□ 0.74
UBE3D-204ENST00000430071 MCM5P33992 734 aa19.65■□□□□ 0.74
UBE3D-204ENST00000430071 ITGA7Q13683 1181 aa19.65■□□□□ 0.74
UBE3D-204ENST00000430071 OR6J1Q8NGC5 347 aa19.65■□□□□ 0.74
UBE3D-204ENST00000430071 ZFP91Q96JP5 570 aaPredicted RBP19.65■□□□□ 0.74
UBE3D-204ENST00000430071 RMDN3Q96TC7 470 aa19.65■□□□□ 0.74
UBE3D-204ENST00000430071 AMNQ9BXJ7 453 aa19.65■□□□□ 0.74
UBE3D-204ENST00000430071 UMODL1Q5DID0 1318 aa19.65■□□□□ 0.74
UBE3D-204ENST00000430071 RBAK-RBAKDNI3L0D1 243 aa19.64■□□□□ 0.73
UBE3D-204ENST00000430071 RXRAP19793 462 aa19.64■□□□□ 0.73
UBE3D-204ENST00000430071 HOXA13P31271 388 aaPredicted RBP19.64■□□□□ 0.73
UBE3D-204ENST00000430071 CCDC62Q6P9F0 684 aa19.64■□□□□ 0.73
UBE3D-204ENST00000430071 SEPT14Q6ZU15 432 aa19.64■□□□□ 0.73
UBE3D-204ENST00000430071 ZNF654Q8IZM8 581 aa19.64■□□□□ 0.73
UBE3D-204ENST00000430071 DEFB123Q8N688 67 aa19.64■□□□□ 0.73
UBE3D-204ENST00000430071 BACH2Q9BYV9 841 aa19.64■□□□□ 0.73
UBE3D-204ENST00000430071 PPP1R12CQ9BZL4 782 aa19.64■□□□□ 0.73
UBE3D-204ENST00000430071 TRPV6Q9H1D0 765 aa19.64■□□□□ 0.73
UBE3D-204ENST00000430071 PCDHA1Q9Y5I3 950 aa19.64■□□□□ 0.73
UBE3D-204ENST00000430071 SH2B2O14492 632 aaPredicted RBP19.63■□□□□ 0.73
UBE3D-204ENST00000430071 TIMP1P01033 207 aa19.63■□□□□ 0.73
UBE3D-204ENST00000430071 MYL3P08590 195 aa19.63■□□□□ 0.73
UBE3D-204ENST00000430071 TXNP10599 105 aaKnown RBP19.63■□□□□ 0.73
UBE3D-204ENST00000430071 HSD17B4P51659 736 aa19.63■□□□□ 0.73
UBE3D-204ENST00000430071 PURAQ00577 322 aaKnown RBP19.63■□□□□ 0.73
UBE3D-204ENST00000430071 EXOSC10Q01780 885 aaKnown RBP19.63■□□□□ 0.73
UBE3D-204ENST00000430071 PPP2R5BQ15173 497 aa19.63■□□□□ 0.73
UBE3D-204ENST00000430071 LY6KQ17RY6 165 aa19.63■□□□□ 0.73
UBE3D-204ENST00000430071 C16orf59Q7L2K0 433 aa19.63■□□□□ 0.73
UBE3D-204ENST00000430071 IL31RAQ8NI17 732 aa19.63■□□□□ 0.73
UBE3D-204ENST00000430071 NSUN6Q8TEA1 469 aaKnown RBP19.63■□□□□ 0.73
UBE3D-204ENST00000430071 SCFD2Q8WU76 684 aa19.63■□□□□ 0.73
UBE3D-204ENST00000430071 TCEANC2Q96MN5 208 aa19.63■□□□□ 0.73
UBE3D-204ENST00000430071 PLEKHA8P1O95397 391 aa19.62■□□□□ 0.73
UBE3D-204ENST00000430071 CYP2C18P33260 490 aa19.62■□□□□ 0.73
UBE3D-204ENST00000430071 SART3Q15020 963 aaKnown RBP19.62■□□□□ 0.73
UBE3D-204ENST00000430071 DHX32Q7L7V1 743 aaKnown RBP19.62■□□□□ 0.73
UBE3D-204ENST00000430071 CATIPQ7Z7H3 387 aa19.62■□□□□ 0.73
UBE3D-204ENST00000430071 MCF2L2Q86YR7 1114 aa19.62■□□□□ 0.73
UBE3D-204ENST00000430071 CMTR1Q8N1G2 835 aaKnown RBP19.62■□□□□ 0.73
UBE3D-204ENST00000430071 PXMP2Q9NR77 195 aa19.62■□□□□ 0.73
UBE3D-204ENST00000430071 MROH7Q68CQ1 1323 aa19.61■□□□□ 0.73
UBE3D-204ENST00000430071 B4GALT4O60513 344 aa19.61■□□□□ 0.73
UBE3D-204ENST00000430071 CABYRO75952 493 aa19.61■□□□□ 0.73
UBE3D-204ENST00000430071 NR3C2P08235 984 aa19.61■□□□□ 0.73
UBE3D-204ENST00000430071 HMGB1P09429 215 aaKnown RBP19.61■□□□□ 0.73
UBE3D-204ENST00000430071 CASTP20810 708 aaKnown RBP19.61■□□□□ 0.73
UBE3D-204ENST00000430071 ANAPC15P60006 121 aa19.61■□□□□ 0.73
UBE3D-204ENST00000430071 GHRHRQ02643 423 aa19.61■□□□□ 0.73
UBE3D-204ENST00000430071 FPGSQ05932 587 aa19.61■□□□□ 0.73
UBE3D-204ENST00000430071 ARHGEF16Q5VV41 709 aa19.61■□□□□ 0.73
UBE3D-204ENST00000430071 BLOC1S2Q6QNY1 142 aa19.61■□□□□ 0.73
UBE3D-204ENST00000430071 IL17RAQ96F46 866 aa19.61■□□□□ 0.73
UBE3D-204ENST00000430071 TMEM87BQ96K49 555 aa19.61■□□□□ 0.73
UBE3D-204ENST00000430071 MTA3Q9BTC8 594 aa19.61■□□□□ 0.73
UBE3D-204ENST00000430071 ZSWIM6Q9HCJ5 1215 aa19.61■□□□□ 0.73
UBE3D-204ENST00000430071 ZEB2O60315 1214 aa19.6■□□□□ 0.73
UBE3D-204ENST00000430071 RGS20O76081 388 aa19.6■□□□□ 0.73
UBE3D-204ENST00000430071 CSF2RAP15509 400 aa19.6■□□□□ 0.73
UBE3D-204ENST00000430071 RPS6KB1P23443 525 aa19.6■□□□□ 0.73
UBE3D-204ENST00000430071 PSMA5P28066 241 aa19.6■□□□□ 0.73
UBE3D-204ENST00000430071 MFSD5Q6N075 450 aa19.6■□□□□ 0.73
UBE3D-204ENST00000430071 FAM161BQ96MY7 647 aa19.6■□□□□ 0.73
UBE3D-204ENST00000430071 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.6■□□□□ 0.73
UBE3D-204ENST00000430071 TM6SF1Q9BZW5 370 aa19.6■□□□□ 0.73
UBE3D-204ENST00000430071 MTMR10Q9NXD2 777 aa19.6■□□□□ 0.73
UBE3D-204ENST00000430071 KAT6AQ92794 2004 aa19.59■□□□□ 0.73
UBE3D-204ENST00000430071 PNMA6FA0A0J9YX94 578 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms